RNA–Protein interactions for RNA: ENST00000563404.1

HDGFL3-203, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-203ENST00000563404 RBMY1CP0DJD4 496 aa12.21□□□□□ -0.45
HDGFL3-203ENST00000563404 S100GP29377 79 aa12.21□□□□□ -0.45
HDGFL3-203ENST00000563404 NPBWR1P48145 328 aa12.21□□□□□ -0.45
HDGFL3-203ENST00000563404 ASAH1Q13510 395 aa12.21□□□□□ -0.45
HDGFL3-203ENST00000563404 RBMY1FQ15415 496 aaKnown RBP12.21□□□□□ -0.45
HDGFL3-203ENST00000563404 DUSP18Q8NEJ0 188 aa12.21□□□□□ -0.45
HDGFL3-203ENST00000563404 GPR132Q9UNW8 380 aa12.21□□□□□ -0.45
HDGFL3-203ENST00000563404 INS-IGF2F8WCM5 200 aa12.2□□□□□ -0.46
HDGFL3-203ENST00000563404 RND3P61587 244 aa12.2□□□□□ -0.46
HDGFL3-203ENST00000563404 RPL11P62913 178 aaKnown RBP12.2□□□□□ -0.46
HDGFL3-203ENST00000563404 MLANAQ16655 118 aa12.2□□□□□ -0.46
HDGFL3-203ENST00000563404 SCGB2B2Q4G0G5 96 aa12.2□□□□□ -0.46
HDGFL3-203ENST00000563404 OR13C8Q8NGS7 320 aa12.2□□□□□ -0.46
HDGFL3-203ENST00000563404 FNDC4Q9H6D8 234 aaPredicted RBP12.2□□□□□ -0.46
HDGFL3-203ENST00000563404 PKHD1P08F94 4074 aa12.2□□□□□ -0.46
HDGFL3-203ENST00000563404 AGRNO00468 2067 aa12.19□□□□□ -0.46
HDGFL3-203ENST00000563404 IGHV4-28A0A0C4DH34 117 aa12.19□□□□□ -0.46
HDGFL3-203ENST00000563404 IGLL5B9A064 214 aa12.19□□□□□ -0.46
HDGFL3-203ENST00000563404 LYRM1O43325 122 aa12.19□□□□□ -0.46
HDGFL3-203ENST00000563404 B3GALNT1O75752 331 aa12.19□□□□□ -0.46
HDGFL3-203ENST00000563404 RNASE2P10153 161 aaKnown RBP12.19□□□□□ -0.46
HDGFL3-203ENST00000563404 PI3P19957 117 aa12.19□□□□□ -0.46
HDGFL3-203ENST00000563404 C4BPBP20851 252 aa12.19□□□□□ -0.46
HDGFL3-203ENST00000563404 FAAP20Q6NZ36 180 aa12.19□□□□□ -0.46
HDGFL3-203ENST00000563404 MZT2BQ6NZ67 158 aa12.19□□□□□ -0.46
HDGFL3-203ENST00000563404 TRPT1Q86TN4 253 aaKnown RBP12.19□□□□□ -0.46
HDGFL3-203ENST00000563404 STHQ8IWL8 128 aa12.19□□□□□ -0.46
HDGFL3-203ENST00000563404 TP53RKQ96S44 253 aa12.19□□□□□ -0.46
HDGFL3-203ENST00000563404 COPZ2Q9P299 210 aa12.19□□□□□ -0.46
HDGFL3-203ENST00000563404 RABAC1Q9UI14 185 aa12.19□□□□□ -0.46
HDGFL3-203ENST00000563404 K7EQG2 157 aa12.18□□□□□ -0.46
HDGFL3-203ENST00000563404 TCTAP57738 103 aa12.18□□□□□ -0.46
HDGFL3-203ENST00000563404 DEFA1P59665 94 aa12.18□□□□□ -0.46
HDGFL3-203ENST00000563404 DEFA3P59666 94 aa12.18□□□□□ -0.46
HDGFL3-203ENST00000563404 IFITM3Q01628 133 aa12.18□□□□□ -0.46
HDGFL3-203ENST00000563404 HRH4Q9H3N8 390 aa12.18□□□□□ -0.46
HDGFL3-203ENST00000563404 DYNC1H1Q14204 4646 aaKnown RBP12.18□□□□□ -0.46
HDGFL3-203ENST00000563404 A0A0G2JRQ6 117 aa12.17□□□□□ -0.46
HDGFL3-203ENST00000563404 KNCNA6PVL3 124 aa12.17□□□□□ -0.46
HDGFL3-203ENST00000563404 NDUFB6O95139 128 aa12.17□□□□□ -0.46
HDGFL3-203ENST00000563404 PGAM2P15259 253 aa12.17□□□□□ -0.46
HDGFL3-203ENST00000563404 NPPCP23582 126 aa12.17□□□□□ -0.46
HDGFL3-203ENST00000563404 CRYBB3P26998 211 aa12.17□□□□□ -0.46
HDGFL3-203ENST00000563404 SNCAP37840 140 aa12.17□□□□□ -0.46
HDGFL3-203ENST00000563404 SLC35G3Q8N808 338 aa12.17□□□□□ -0.46
HDGFL3-203ENST00000563404 STXBP6Q8NFX7 210 aa12.17□□□□□ -0.46
HDGFL3-203ENST00000563404 MARCH1Q8TCQ1 289 aa12.17□□□□□ -0.46
HDGFL3-203ENST00000563404 RTBDNQ9BSG5 229 aaPredicted RBP12.17□□□□□ -0.46
HDGFL3-203ENST00000563404 TBC1D24Q9ULP9 559 aa12.17□□□□□ -0.46
HDGFL3-203ENST00000563404 C14orf166Q9Y224 244 aaKnown RBP12.17□□□□□ -0.46
HDGFL3-203ENST00000563404 X6R8D5 127 aa12.17□□□□□ -0.46
HDGFL3-203ENST00000563404 ELOA3CA0A087WX78 387 aaPredicted RBP12.16□□□□□ -0.46
HDGFL3-203ENST00000563404 ZNF705EA8MWA4 302 aaPredicted RBP12.16□□□□□ -0.46
HDGFL3-203ENST00000563404 C11orf94C9JXX5 98 aa12.16□□□□□ -0.46
HDGFL3-203ENST00000563404 CLN5O75503 358 aa12.16□□□□□ -0.46
HDGFL3-203ENST00000563404 IFNA17P01571 189 aa12.16□□□□□ -0.46
HDGFL3-203ENST00000563404 IGKV1-17P01599 117 aa12.16□□□□□ -0.46
HDGFL3-203ENST00000563404 ZNF688P0C7X2 276 aa12.16□□□□□ -0.46
HDGFL3-203ENST00000563404 HLA-DMBP28068 263 aa12.16□□□□□ -0.46
HDGFL3-203ENST00000563404 BTCP35070 178 aa12.16□□□□□ -0.46
HDGFL3-203ENST00000563404 P2RY1P47900 373 aa12.16□□□□□ -0.46
HDGFL3-203ENST00000563404 PIGPP57054 158 aa12.16□□□□□ -0.46
HDGFL3-203ENST00000563404 Q6ZTC4 211 aa12.16□□□□□ -0.46
HDGFL3-203ENST00000563404 CCDC71LQ8N9Z2 235 aa12.16□□□□□ -0.46
HDGFL3-203ENST00000563404 OR4X1Q8NH49 305 aa12.16□□□□□ -0.46
HDGFL3-203ENST00000563404 DCANP1Q8TF63 244 aa12.16□□□□□ -0.46
HDGFL3-203ENST00000563404 TMEM231Q9H6L2 316 aa12.16□□□□□ -0.46
HDGFL3-203ENST00000563404 LINC00854A0A1B0GVQ3 168 aa12.15□□□□□ -0.46
HDGFL3-203ENST00000563404 AKR1C2P52895 323 aa12.15□□□□□ -0.46
HDGFL3-203ENST00000563404 UBE2MP61081 183 aaKnown RBP12.15□□□□□ -0.46
HDGFL3-203ENST00000563404 BSXQ3C1V8 233 aa12.15□□□□□ -0.46
HDGFL3-203ENST00000563404 SP6Q3SY56 376 aa12.15□□□□□ -0.46
HDGFL3-203ENST00000563404 TIGITQ495A1 244 aa12.15□□□□□ -0.46
HDGFL3-203ENST00000563404 Q6ZRM9 215 aa12.15□□□□□ -0.46
HDGFL3-203ENST00000563404 CSNK1G2-AS1Q8NCQ2 148 aa12.15□□□□□ -0.46
HDGFL3-203ENST00000563404 GRAMD2BQ96HH9 432 aa12.15□□□□□ -0.46
HDGFL3-203ENST00000563404 METTL26Q96S19 204 aa12.15□□□□□ -0.46
HDGFL3-203ENST00000563404 CLEC5AQ9NY25 188 aa12.15□□□□□ -0.46
HDGFL3-203ENST00000563404 RYR1P21817 5038 aa12.15□□□□□ -0.46
HDGFL3-203ENST00000563404 PKD1P98161 4303 aa12.14□□□□□ -0.47
HDGFL3-203ENST00000563404 C3orf85A0A1B0GTC6 90 aa12.14□□□□□ -0.47
HDGFL3-203ENST00000563404 FAM240BA0A1B0GVZ2 78 aa12.14□□□□□ -0.47
HDGFL3-203ENST00000563404 CORTO00230 105 aa12.14□□□□□ -0.47
HDGFL3-203ENST00000563404 SPP1P10451 314 aa12.14□□□□□ -0.47
HDGFL3-203ENST00000563404 MIFP14174 115 aa12.14□□□□□ -0.47
HDGFL3-203ENST00000563404 OPRK1P41145 380 aa12.14□□□□□ -0.47
HDGFL3-203ENST00000563404 HOXA1P49639 335 aaPredicted RBP12.14□□□□□ -0.47
HDGFL3-203ENST00000563404 CCR6P51684 374 aa12.14□□□□□ -0.47
HDGFL3-203ENST00000563404 MORN3Q6PF18 240 aaPredicted RBP12.14□□□□□ -0.47
HDGFL3-203ENST00000563404 KCNIP3Q9Y2W7 256 aa12.14□□□□□ -0.47
HDGFL3-203ENST00000563404 U3KQE9 123 aa12.14□□□□□ -0.47
HDGFL3-203ENST00000563404 DNAH11Q96DT5 4516 aa12.14□□□□□ -0.47
HDGFL3-203ENST00000563404 PIGBOS1A0A0B4J2F0 54 aa12.13□□□□□ -0.47
HDGFL3-203ENST00000563404 A0A1W2PS18 150 aa12.13□□□□□ -0.47
HDGFL3-203ENST00000563404 TCRBP04435 133 aa12.13□□□□□ -0.47
HDGFL3-203ENST00000563404 SUB1P53999 127 aaKnown RBP eCLIP12.13□□□□□ -0.47
HDGFL3-203ENST00000563404 DHODHQ02127 395 aa12.13□□□□□ -0.47
HDGFL3-203ENST00000563404 TMEM41BQ5BJD5 291 aa12.13□□□□□ -0.47
HDGFL3-203ENST00000563404 TMEM128Q5BJH2 165 aa12.13□□□□□ -0.47
HDGFL3-203ENST00000563404 ACTL10Q5JWF8 245 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms