RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 A0A1W2PRE2 83 aa11.47□□□□□ -0.57
GTF3C1-203ENST00000562609 A6NJY4 79 aa11.47□□□□□ -0.57
GTF3C1-203ENST00000562609 ZNF207O43670 478 aaKnown RBP11.47□□□□□ -0.57
GTF3C1-203ENST00000562609 BRWD1-AS2P59051 145 aa11.47□□□□□ -0.57
GTF3C1-203ENST00000562609 HOXA4Q00056 320 aaPredicted RBP11.47□□□□□ -0.57
GTF3C1-203ENST00000562609 ALKBH6Q3KRA9 238 aa11.47□□□□□ -0.57
GTF3C1-203ENST00000562609 CD300EQ496F6 205 aaPredicted RBP11.47□□□□□ -0.57
GTF3C1-203ENST00000562609 CCDC144NLQ6NUI1 221 aa11.47□□□□□ -0.57
GTF3C1-203ENST00000562609 MIR17HGQ75NE6 70 aa11.47□□□□□ -0.57
GTF3C1-203ENST00000562609 ROS1P08922 2347 aa11.46□□□□□ -0.57
GTF3C1-203ENST00000562609 IGHV1-2P23083 117 aa11.46□□□□□ -0.57
GTF3C1-203ENST00000562609 CEACAM21Q3KPI0 293 aa11.46□□□□□ -0.57
GTF3C1-203ENST00000562609 H1FXQ92522 213 aaKnown RBP11.46□□□□□ -0.57
GTF3C1-203ENST00000562609 C5orf30Q96GV9 206 aa11.46□□□□□ -0.57
GTF3C1-203ENST00000562609 OR2V2Q96R30 315 aa11.46□□□□□ -0.57
GTF3C1-203ENST00000562609 TM4SF5O14894 197 aa11.46□□□□□ -0.58
GTF3C1-203ENST00000562609 LINC00205P59089 165 aa11.46□□□□□ -0.58
GTF3C1-203ENST00000562609 FOXF2Q12947 444 aa11.46□□□□□ -0.58
GTF3C1-203ENST00000562609 FAM162BQ5T6X4 162 aa11.46□□□□□ -0.58
GTF3C1-203ENST00000562609 FAM53AQ6NSI3 398 aaPredicted RBP11.46□□□□□ -0.58
GTF3C1-203ENST00000562609 ZNF645Q8N7E2 425 aa11.46□□□□□ -0.58
GTF3C1-203ENST00000562609 FBLL1A6NHQ2 334 aaKnown RBP11.45□□□□□ -0.58
GTF3C1-203ENST00000562609 TRAT1Q6PIZ9 186 aa11.45□□□□□ -0.58
GTF3C1-203ENST00000562609 FAM214BQ7L5A3 538 aa11.45□□□□□ -0.58
GTF3C1-203ENST00000562609 PRSS33Q8NF86 280 aa11.45□□□□□ -0.58
GTF3C1-203ENST00000562609 FAM222BQ8WU58 562 aa11.45□□□□□ -0.58
GTF3C1-203ENST00000562609 IGF2BP2-AS1Q96M15 143 aa11.45□□□□□ -0.58
GTF3C1-203ENST00000562609 HEYLQ9NQ87 328 aaPredicted RBP11.45□□□□□ -0.58
GTF3C1-203ENST00000562609 RABAC1Q9UI14 185 aa11.45□□□□□ -0.58
GTF3C1-203ENST00000562609 GGTLC3B5MD39 225 aa11.45□□□□□ -0.58
GTF3C1-203ENST00000562609 ADH4P08319 380 aa11.45□□□□□ -0.58
GTF3C1-203ENST00000562609 CATR1Q13166 79 aa11.45□□□□□ -0.58
GTF3C1-203ENST00000562609 NANOS1Q8WY41 292 aaKnown RBP11.45□□□□□ -0.58
GTF3C1-203ENST00000562609 TAAR6Q96RI8 345 aa11.45□□□□□ -0.58
GTF3C1-203ENST00000562609 C9orf106Q8NAJ2 232 aa11.45□□□□□ -0.58
GTF3C1-203ENST00000562609 OR2Z1Q8NG97 314 aa11.45□□□□□ -0.58
GTF3C1-203ENST00000562609 LRRC29Q8WV35 223 aa11.45□□□□□ -0.58
GTF3C1-203ENST00000562609 CHCHD1Q96BP2 118 aaKnown RBP11.45□□□□□ -0.58
GTF3C1-203ENST00000562609 C1orf159Q96HA4 380 aa11.45□□□□□ -0.58
GTF3C1-203ENST00000562609 DUSP13Q9UII6 198 aa11.45□□□□□ -0.58
GTF3C1-203ENST00000562609 LINC00596Q86U02 117 aa11.44□□□□□ -0.58
GTF3C1-203ENST00000562609 SNRNP40Q96DI7 357 aaKnown RBP11.44□□□□□ -0.58
GTF3C1-203ENST00000562609 PLEKHA3Q9HB20 300 aa11.44□□□□□ -0.58
GTF3C1-203ENST00000562609 ANKRD30BLA7E2S9 258 aa11.44□□□□□ -0.58
GTF3C1-203ENST00000562609 HIGD1CA8MV81 97 aa11.44□□□□□ -0.58
GTF3C1-203ENST00000562609 K7EQM0 130 aa11.44□□□□□ -0.58
GTF3C1-203ENST00000562609 SS18L1O75177 396 aaPredicted RBP11.44□□□□□ -0.58
GTF3C1-203ENST00000562609 LIPFP07098 398 aa11.44□□□□□ -0.58
GTF3C1-203ENST00000562609 FABP2P12104 132 aa11.44□□□□□ -0.58
GTF3C1-203ENST00000562609 Q6ZR03 302 aa11.44□□□□□ -0.58
GTF3C1-203ENST00000562609 LINC00479Q96M42 142 aa11.44□□□□□ -0.58
GTF3C1-203ENST00000562609 TMEM167BQ9NRX6 74 aa11.44□□□□□ -0.58
GTF3C1-203ENST00000562609 ZNF138P52744 262 aa11.43□□□□□ -0.58
GTF3C1-203ENST00000562609 MOB1BQ7L9L4 216 aa11.43□□□□□ -0.58
GTF3C1-203ENST00000562609 ABHD12Q8N2K0 398 aa11.43□□□□□ -0.58
GTF3C1-203ENST00000562609 BLNKQ8WV28 456 aa11.43□□□□□ -0.58
GTF3C1-203ENST00000562609 MBD6Q96DN6 1003 aa11.43□□□□□ -0.58
GTF3C1-203ENST00000562609 KCNIP1Q9NZI2 227 aa11.43□□□□□ -0.58
GTF3C1-203ENST00000562609 FZR1Q9UM11 496 aa11.43□□□□□ -0.58
GTF3C1-203ENST00000562609 ZNF257Q9Y2Q1 563 aa11.43□□□□□ -0.58
GTF3C1-203ENST00000562609 LSM4Q9Y4Z0 139 aaKnown RBP11.43□□□□□ -0.58
GTF3C1-203ENST00000562609 KALRNO60229 2985 aa11.43□□□□□ -0.58
GTF3C1-203ENST00000562609 TRAV17A0A0B4J275 112 aa11.43□□□□□ -0.58
GTF3C1-203ENST00000562609 SERTM2A0A1B0GWG4 89 aa11.43□□□□□ -0.58
GTF3C1-203ENST00000562609 OR9G9P0C7N8 305 aa11.43□□□□□ -0.58
GTF3C1-203ENST00000562609 AESQ08117 197 aa11.43□□□□□ -0.58
GTF3C1-203ENST00000562609 TMEM189A5PLL7 270 aa11.42□□□□□ -0.58
GTF3C1-203ENST00000562609 VWC2LB2RUY7 222 aa11.42□□□□□ -0.58
GTF3C1-203ENST00000562609 K7EM74 188 aa11.42□□□□□ -0.58
GTF3C1-203ENST00000562609 IGFBP2P18065 325 aa11.42□□□□□ -0.58
GTF3C1-203ENST00000562609 ZNF497Q6ZNH5 498 aa11.42□□□□□ -0.58
GTF3C1-203ENST00000562609 CXorf67Q86X51 503 aaPredicted RBP11.42□□□□□ -0.58
GTF3C1-203ENST00000562609 GRAMD2BQ96HH9 432 aa11.42□□□□□ -0.58
GTF3C1-203ENST00000562609 IDI2-AS1Q9NZ38 188 aa11.42□□□□□ -0.58
GTF3C1-203ENST00000562609 PRSS46E5RG02 174 aa11.42□□□□□ -0.58
GTF3C1-203ENST00000562609 KIR2DL2P43627 348 aaPredicted RBP11.42□□□□□ -0.58
GTF3C1-203ENST00000562609 GUSBP1Q15486 140 aa11.42□□□□□ -0.58
GTF3C1-203ENST00000562609 TBC1D28Q2M2D7 210 aa11.42□□□□□ -0.58
GTF3C1-203ENST00000562609 LINC01545Q5VT33 79 aa11.42□□□□□ -0.58
GTF3C1-203ENST00000562609 TEPPQ6URK8 271 aa11.42□□□□□ -0.58
GTF3C1-203ENST00000562609 TMEM116Q8NCL8 245 aa11.42□□□□□ -0.58
GTF3C1-203ENST00000562609 IGHG3P01860 377 aa11.41□□□□□ -0.58
GTF3C1-203ENST00000562609 OR5AL1P0C617 328 aa11.41□□□□□ -0.58
GTF3C1-203ENST00000562609 FGF6P10767 208 aa11.41□□□□□ -0.58
GTF3C1-203ENST00000562609 TCTAP57738 103 aa11.41□□□□□ -0.58
GTF3C1-203ENST00000562609 ADAMTSL5Q6ZMM2 481 aa11.41□□□□□ -0.58
GTF3C1-203ENST00000562609 TEX45Q8NA69 505 aa11.41□□□□□ -0.58
GTF3C1-203ENST00000562609 ZBTB34Q8NCN2 500 aa11.41□□□□□ -0.58
GTF3C1-203ENST00000562609 FAM216AQ8WUB2 273 aa11.41□□□□□ -0.58
GTF3C1-203ENST00000562609 NEU4Q8WWR8 484 aaPredicted RBP11.41□□□□□ -0.58
GTF3C1-203ENST00000562609 GEMIN7Q9H840 131 aaKnown RBP11.41□□□□□ -0.58
GTF3C1-203ENST00000562609 ZGRF1Q86YA3 2104 aa11.41□□□□□ -0.58
GTF3C1-203ENST00000562609 TMPRSS3P57727 454 aa11.41□□□□□ -0.58
GTF3C1-203ENST00000562609 FA2HQ7L5A8 372 aa11.41□□□□□ -0.58
GTF3C1-203ENST00000562609 WDR86Q86TI4 376 aa11.41□□□□□ -0.58
GTF3C1-203ENST00000562609 HSD17B10Q99714 261 aaKnown RBP11.41□□□□□ -0.58
GTF3C1-203ENST00000562609 HSPB8Q9UJY1 196 aa11.41□□□□□ -0.58
GTF3C1-203ENST00000562609 PLCE1Q9P212 2302 aa11.41□□□□□ -0.58
GTF3C1-203ENST00000562609 EIF4EBP1Q13541 118 aaPredicted RBP11.41□□□□□ -0.58
GTF3C1-203ENST00000562609 TCTEX1D4Q5JR98 221 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms