RNA–Protein interactions for RNA: ENST00000562425.1

PKD1-226, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 3

Gene PKD1, Length 608 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-226ENST00000562425 SLC35E1Q96K37 410 aa12.38□□□□□ -0.43
PKD1-226ENST00000562425 MRPL36Q9P0J6 103 aaKnown RBP12.38□□□□□ -0.43
PKD1-226ENST00000562425 GSKIPQ9P0R6 139 aa12.38□□□□□ -0.43
PKD1-226ENST00000562425 SMPXQ9UHP9 88 aa12.38□□□□□ -0.43
PKD1-226ENST00000562425 PUS1Q9Y606 427 aaKnown RBP eCLIP12.38□□□□□ -0.43
PKD1-226ENST00000562425 IGHV3OR16-8A0A075B7F1 116 aa12.37□□□□□ -0.43
PKD1-226ENST00000562425 IGHV7-4-1A0A0J9YVY3 117 aa12.37□□□□□ -0.43
PKD1-226ENST00000562425 ZNF207O43670 478 aaKnown RBP12.37□□□□□ -0.43
PKD1-226ENST00000562425 OR10J1P30954 320 aa12.37□□□□□ -0.43
PKD1-226ENST00000562425 YPEL3P61236 119 aaPredicted RBP12.37□□□□□ -0.43
PKD1-226ENST00000562425 NRARPQ7Z6K4 114 aa12.37□□□□□ -0.43
PKD1-226ENST00000562425 TMEM61Q8N0U2 210 aa12.37□□□□□ -0.43
PKD1-226ENST00000562425 Q8N1Y9 231 aa12.37□□□□□ -0.43
PKD1-226ENST00000562425 ZBTB8BQ8NAP8 495 aaPredicted RBP12.37□□□□□ -0.43
PKD1-226ENST00000562425 Q8WTZ3 238 aa12.37□□□□□ -0.43
PKD1-226ENST00000562425 NPIPB3Q92617 1050 aa12.37□□□□□ -0.43
PKD1-226ENST00000562425 ACY3Q96HD9 319 aa12.37□□□□□ -0.43
PKD1-226ENST00000562425 STRAPQ9Y3F4 350 aaKnown RBP12.37□□□□□ -0.43
PKD1-226ENST00000562425 FAM25EA8MYX2 175 aa12.36□□□□□ -0.43
PKD1-226ENST00000562425 PRAF2O60831 178 aa12.36□□□□□ -0.43
PKD1-226ENST00000562425 SCGB1D2O95969 90 aa12.36□□□□□ -0.43
PKD1-226ENST00000562425 IGKV1-17P01599 117 aa12.36□□□□□ -0.43
PKD1-226ENST00000562425 IGLC1P0CG04 106 aa12.36□□□□□ -0.43
PKD1-226ENST00000562425 POLR2GP62487 172 aaKnown RBP eCLIP12.36□□□□□ -0.43
PKD1-226ENST00000562425 TIGITQ495A1 244 aa12.36□□□□□ -0.43
PKD1-226ENST00000562425 SPANXN5Q5MJ07 72 aa12.36□□□□□ -0.43
PKD1-226ENST00000562425 WDR89Q96FK6 387 aaPredicted RBP12.36□□□□□ -0.43
PKD1-226ENST00000562425 RAB40CQ96S21 281 aa12.36□□□□□ -0.43
PKD1-226ENST00000562425 RHPN1-AS1Q9BWJ2 59 aa12.36□□□□□ -0.43
PKD1-226ENST00000562425 C5orf51A6NDU8 294 aa12.35□□□□□ -0.43
PKD1-226ENST00000562425 INMT-MINDY4F8WBC2 141 aa12.35□□□□□ -0.43
PKD1-226ENST00000562425 SCAF4O95104 1147 aaKnown RBP12.35□□□□□ -0.43
PKD1-226ENST00000562425 CD5P06127 495 aa12.35□□□□□ -0.43
PKD1-226ENST00000562425 FABP1P07148 127 aa12.35□□□□□ -0.43
PKD1-226ENST00000562425 NHLRC4P0CG21 123 aaPredicted RBP12.35□□□□□ -0.43
PKD1-226ENST00000562425 NPPCP23582 126 aa12.35□□□□□ -0.43
PKD1-226ENST00000562425 CD81P60033 236 aa12.35□□□□□ -0.43
PKD1-226ENST00000562425 NARS2Q96I59 477 aaKnown RBP12.35□□□□□ -0.43
PKD1-226ENST00000562425 ZNF414Q96IQ9 312 aa12.35□□□□□ -0.43
PKD1-226ENST00000562425 SMIM8Q96KF7 97 aa12.35□□□□□ -0.43
PKD1-226ENST00000562425 WWC2-AS2Q96NR7 200 aa12.35□□□□□ -0.43
PKD1-226ENST00000562425 NEURL2Q9BR09 285 aa12.35□□□□□ -0.43
PKD1-226ENST00000562425 TMEM231Q9H6L2 316 aa12.35□□□□□ -0.43
PKD1-226ENST00000562425 ZFAND3Q9H8U3 227 aa12.35□□□□□ -0.43
PKD1-226ENST00000562425 PSENENQ9NZ42 101 aa12.35□□□□□ -0.43
PKD1-226ENST00000562425 A0A1W2PS18 150 aa12.34□□□□□ -0.43
PKD1-226ENST00000562425 SNRPGP15A8MWD9 76 aa12.34□□□□□ -0.43
PKD1-226ENST00000562425 A8MZ25 164 aa12.34□□□□□ -0.43
PKD1-226ENST00000562425 CCSO14618 274 aa12.34□□□□□ -0.43
PKD1-226ENST00000562425 CHEK1O14757 476 aa12.34□□□□□ -0.43
PKD1-226ENST00000562425 TSPAN4O14817 238 aa12.34□□□□□ -0.43
PKD1-226ENST00000562425 SSSCA1O60232 199 aa12.34□□□□□ -0.43
PKD1-226ENST00000562425 TAS2R30P59541 319 aa12.34□□□□□ -0.43
PKD1-226ENST00000562425 GAMTQ14353 236 aa12.34□□□□□ -0.43
PKD1-226ENST00000562425 GSG1LQ6UXU4 331 aa12.34□□□□□ -0.43
PKD1-226ENST00000562425 C2orf50Q96LR7 162 aa12.34□□□□□ -0.43
PKD1-226ENST00000562425 METTL26Q96S19 204 aa12.34□□□□□ -0.43
PKD1-226ENST00000562425 SPAG8Q99932 426 aaPredicted RBP12.34□□□□□ -0.43
PKD1-226ENST00000562425 TUBA4BQ9H853 241 aa12.34□□□□□ -0.43
PKD1-226ENST00000562425 SELENOKQ9Y6D0 94 aa12.34□□□□□ -0.43
PKD1-226ENST00000562425 ZFP92A6NM28 416 aa12.33□□□□□ -0.44
PKD1-226ENST00000562425 RD3LP0DJH9 198 aa12.33□□□□□ -0.44
PKD1-226ENST00000562425 IGHV4-30-4P0DP06 118 aa12.33□□□□□ -0.44
PKD1-226ENST00000562425 MARVELD1Q9BSK0 173 aa12.33□□□□□ -0.44
PKD1-226ENST00000562425 IGHV3-49A0A0A0MS15 119 aa12.32□□□□□ -0.44
PKD1-226ENST00000562425 OR4C46A6NHA9 309 aa12.32□□□□□ -0.44
PKD1-226ENST00000562425 H3BP45 60 aa12.32□□□□□ -0.44
PKD1-226ENST00000562425 L7N2F9 121 aa12.32□□□□□ -0.44
PKD1-226ENST00000562425 TOMM40O96008 361 aa12.32□□□□□ -0.44
PKD1-226ENST00000562425 MBPP02686 304 aaPredicted RBP12.32□□□□□ -0.44
PKD1-226ENST00000562425 FRMD6-AS1P0C7T7 363 aa12.32□□□□□ -0.44
PKD1-226ENST00000562425 VAMP2P63027 116 aa12.32□□□□□ -0.44
PKD1-226ENST00000562425 GRAMD2BQ96HH9 432 aa12.32□□□□□ -0.44
PKD1-226ENST00000562425 VSIRQ9H7M9 311 aa12.32□□□□□ -0.44
PKD1-226ENST00000562425 RYR3Q15413 4870 aa12.31□□□□□ -0.44
PKD1-226ENST00000562425 TSC22D2O75157 780 aa12.31□□□□□ -0.44
PKD1-226ENST00000562425 CD7P09564 240 aa12.31□□□□□ -0.44
PKD1-226ENST00000562425 CRYBB3P26998 211 aa12.31□□□□□ -0.44
PKD1-226ENST00000562425 PAFAH1B2P68402 229 aa12.31□□□□□ -0.44
PKD1-226ENST00000562425 OR51G1Q8NGK1 321 aa12.31□□□□□ -0.44
PKD1-226ENST00000562425 RNF2Q99496 336 aa12.31□□□□□ -0.44
PKD1-226ENST00000562425 C19orf73Q9NVV2 129 aa12.31□□□□□ -0.44
PKD1-226ENST00000562425 PFDN2Q9UHV9 154 aa12.31□□□□□ -0.44
PKD1-226ENST00000562425 IGHV3OR16-13A0A075B7E8 117 aa12.3□□□□□ -0.44
PKD1-226ENST00000562425 IGHV3-74A0A0B4J1X5 117 aa12.3□□□□□ -0.44
PKD1-226ENST00000562425 OR11H12B2RN74 326 aa12.3□□□□□ -0.44
PKD1-226ENST00000562425 IL4P05112 153 aa12.3□□□□□ -0.44
PKD1-226ENST00000562425 PSG1P11464 419 aa12.3□□□□□ -0.44
PKD1-226ENST00000562425 PVALBP20472 110 aaPredicted RBP12.3□□□□□ -0.44
PKD1-226ENST00000562425 PAX9P55771 341 aa12.3□□□□□ -0.44
PKD1-226ENST00000562425 CMC4P56277 68 aaPredicted RBP12.3□□□□□ -0.44
PKD1-226ENST00000562425 TCF24Q7RTU0 167 aa12.3□□□□□ -0.44
PKD1-226ENST00000562425 TRGV9Q99603 122 aa12.3□□□□□ -0.44
PKD1-226ENST00000562425 LSM5Q9Y4Y9 91 aaKnown RBP12.3□□□□□ -0.44
PKD1-226ENST00000562425 C7orf66A4D0T2 115 aa12.29□□□□□ -0.44
PKD1-226ENST00000562425 PRSS46E5RG02 174 aa12.29□□□□□ -0.44
PKD1-226ENST00000562425 CFDP00746 253 aaPredicted RBP12.29□□□□□ -0.44
PKD1-226ENST00000562425 HNRNPCP07910 306 aaKnown RBP eCLIP12.29□□□□□ -0.44
PKD1-226ENST00000562425 EIF2B2P49770 351 aaKnown RBP12.29□□□□□ -0.44
PKD1-226ENST00000562425 AKR1C1Q04828 323 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms