RNA–Protein interactions for RNA: ENST00000562357.5

CMTM3-204, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-204ENST00000562357 STPG3Q8N7X2 389 aa13.25□□□□□ -0.29
CMTM3-204ENST00000562357 KIR2DL5BQ8NHK3 375 aa13.25□□□□□ -0.29
CMTM3-204ENST00000562357 Q8WTZ3 238 aa13.25□□□□□ -0.29
CMTM3-204ENST00000562357 GRAMD2BQ96HH9 432 aa13.25□□□□□ -0.29
CMTM3-204ENST00000562357 VSIRQ9H7M9 311 aa13.25□□□□□ -0.29
CMTM3-204ENST00000562357 MRPL36Q9P0J6 103 aaKnown RBP13.25□□□□□ -0.29
CMTM3-204ENST00000562357 HSPB7Q9UBY9 170 aa13.25□□□□□ -0.29
CMTM3-204ENST00000562357 IGHV3-66A0A0C4DH42 116 aa13.24□□□□□ -0.29
CMTM3-204ENST00000562357 OR10J1P30954 320 aa13.24□□□□□ -0.29
CMTM3-204ENST00000562357 EIF2B2P49770 351 aaKnown RBP13.24□□□□□ -0.29
CMTM3-204ENST00000562357 RBMS2Q15434 407 aaKnown RBP13.24□□□□□ -0.29
CMTM3-204ENST00000562357 FAM90A2PQ658T7 463 aa13.24□□□□□ -0.29
CMTM3-204ENST00000562357 PRSS54Q6PEW0 395 aa13.24□□□□□ -0.29
CMTM3-204ENST00000562357 Q6ZWC4 215 aa13.24□□□□□ -0.29
CMTM3-204ENST00000562357 CENPSQ8N2Z9 138 aa13.24□□□□□ -0.29
CMTM3-204ENST00000562357 DFFBO76075 338 aa13.23□□□□□ -0.29
CMTM3-204ENST00000562357 IGKV1-17P01599 117 aa13.23□□□□□ -0.29
CMTM3-204ENST00000562357 IFNA4P05014 189 aa13.23□□□□□ -0.29
CMTM3-204ENST00000562357 RPL35AP18077 110 aaKnown RBP13.23□□□□□ -0.29
CMTM3-204ENST00000562357 ATP5IP56385 69 aaPredicted RBP13.23□□□□□ -0.29
CMTM3-204ENST00000562357 WFDC3Q8IUB2 231 aa13.23□□□□□ -0.29
CMTM3-204ENST00000562357 ACY3Q96HD9 319 aa13.23□□□□□ -0.29
CMTM3-204ENST00000562357 SRRQ9GZT4 340 aa13.23□□□□□ -0.29
CMTM3-204ENST00000562357 RBKSQ9H477 322 aa13.23□□□□□ -0.29
CMTM3-204ENST00000562357 TP53TG1Q9Y2A0 90 aa13.23□□□□□ -0.29
CMTM3-204ENST00000562357 TRAV2A0A0B4J234 112 aa13.22□□□□□ -0.29
CMTM3-204ENST00000562357 NAP1L6A6NFF2 107 aa13.22□□□□□ -0.29
CMTM3-204ENST00000562357 APOHP02749 345 aaPredicted RBP13.22□□□□□ -0.29
CMTM3-204ENST00000562357 IGLC1P0CG04 106 aa13.22□□□□□ -0.29
CMTM3-204ENST00000562357 APRG1Q8IVJ8 170 aa13.22□□□□□ -0.29
CMTM3-204ENST00000562357 OVOL2Q9BRP0 275 aa13.22□□□□□ -0.29
CMTM3-204ENST00000562357 MS4A6AQ9H2W1 248 aa13.22□□□□□ -0.29
CMTM3-204ENST00000562357 MAP6D1Q9H9H5 199 aa13.22□□□□□ -0.29
CMTM3-204ENST00000562357 RABAC1Q9UI14 185 aa13.22□□□□□ -0.29
CMTM3-204ENST00000562357 TMED3Q9Y3Q3 217 aa13.22□□□□□ -0.29
CMTM3-204ENST00000562357 CENPXA8MT69 81 aa13.21□□□□□ -0.29
CMTM3-204ENST00000562357 SPRY2O43597 315 aa13.21□□□□□ -0.29
CMTM3-204ENST00000562357 MED6O75586 246 aa13.21□□□□□ -0.29
CMTM3-204ENST00000562357 SFT2D2O95562 160 aa13.21□□□□□ -0.29
CMTM3-204ENST00000562357 CRYBB3P26998 211 aa13.21□□□□□ -0.29
CMTM3-204ENST00000562357 P2RY1P47900 373 aa13.21□□□□□ -0.29
CMTM3-204ENST00000562357 YPEL3P61236 119 aaPredicted RBP13.21□□□□□ -0.29
CMTM3-204ENST00000562357 DEFB135Q30KP9 77 aa13.21□□□□□ -0.29
CMTM3-204ENST00000562357 LRTM2Q8N967 370 aa13.21□□□□□ -0.29
CMTM3-204ENST00000562357 NPIPB3Q92617 1050 aa13.21□□□□□ -0.29
CMTM3-204ENST00000562357 HELTA6NFD8 242 aa13.2□□□□□ -0.3
CMTM3-204ENST00000562357 FAM90A26D6RGX4 464 aa13.2□□□□□ -0.3
CMTM3-204ENST00000562357 SLC25A6P12236 298 aa13.2□□□□□ -0.3
CMTM3-204ENST00000562357 UBE2MP61081 183 aaKnown RBP13.2□□□□□ -0.3
CMTM3-204ENST00000562357 RAB11AP62491 216 aa13.2□□□□□ -0.3
CMTM3-204ENST00000562357 PPP1R1AQ13522 171 aa13.2□□□□□ -0.3
CMTM3-204ENST00000562357 STXBP6Q8NFX7 210 aa13.2□□□□□ -0.3
CMTM3-204ENST00000562357 TMEM170AQ8WVE7 144 aa13.2□□□□□ -0.3
CMTM3-204ENST00000562357 SLC35E1Q96K37 410 aa13.2□□□□□ -0.3
CMTM3-204ENST00000562357 NDUFA13Q9P0J0 144 aa13.2□□□□□ -0.3
CMTM3-204ENST00000562357 FABP1P07148 127 aa13.19□□□□□ -0.3
CMTM3-204ENST00000562357 HNRNPCP07910 306 aaKnown RBP eCLIP13.19□□□□□ -0.3
CMTM3-204ENST00000562357 RD3LP0DJH9 198 aa13.19□□□□□ -0.3
CMTM3-204ENST00000562357 RPP30P78346 268 aaKnown RBP13.19□□□□□ -0.3
CMTM3-204ENST00000562357 CIB3Q96Q77 187 aaPredicted RBP13.19□□□□□ -0.3
CMTM3-204ENST00000562357 PFDN2Q9UHV9 154 aa13.19□□□□□ -0.3
CMTM3-204ENST00000562357 PAIP2BQ9ULR5 123 aaKnown RBP13.19□□□□□ -0.3
CMTM3-204ENST00000562357 ZFP92A6NM28 416 aa13.18□□□□□ -0.3
CMTM3-204ENST00000562357 MPTX1A8MV57 137 aa13.18□□□□□ -0.3
CMTM3-204ENST00000562357 TOMM40O96008 361 aa13.18□□□□□ -0.3
CMTM3-204ENST00000562357 IL4P05112 153 aa13.18□□□□□ -0.3
CMTM3-204ENST00000562357 AP2S1P53680 142 aaPredicted RBP13.18□□□□□ -0.3
CMTM3-204ENST00000562357 DEFB131AP59861 70 aa13.18□□□□□ -0.3
CMTM3-204ENST00000562357 LILRB2Q8N423 598 aa13.18□□□□□ -0.3
CMTM3-204ENST00000562357 CSTL1Q9H114 145 aa13.18□□□□□ -0.3
CMTM3-204ENST00000562357 LINC00854A0A1B0GVQ3 168 aa13.17□□□□□ -0.3
CMTM3-204ENST00000562357 PITX3O75364 302 aa13.17□□□□□ -0.3
CMTM3-204ENST00000562357 NDUFB6O95139 128 aa13.17□□□□□ -0.3
CMTM3-204ENST00000562357 HOXB5P09067 269 aa13.17□□□□□ -0.3
CMTM3-204ENST00000562357 IAPPP10997 89 aa13.17□□□□□ -0.3
CMTM3-204ENST00000562357 GPX4P36969 197 aaPredicted RBP13.17□□□□□ -0.3
CMTM3-204ENST00000562357 NUP62P37198 522 aaPredicted RBP13.17□□□□□ -0.3
CMTM3-204ENST00000562357 BAK1Q16611 211 aa13.17□□□□□ -0.3
CMTM3-204ENST00000562357 TMEM217Q8N7C4 229 aa13.17□□□□□ -0.3
CMTM3-204ENST00000562357 COQ8AQ8NI60 647 aa13.17□□□□□ -0.3
CMTM3-204ENST00000562357 RNF183Q96D59 192 aa13.17□□□□□ -0.3
CMTM3-204ENST00000562357 C7orf50Q9BRJ6 194 aaKnown RBP13.17□□□□□ -0.3
CMTM3-204ENST00000562357 ZNF124Q15973 351 aa13.16□□□□□ -0.3
CMTM3-204ENST00000562357 LEMD1Q68G75 181 aa13.16□□□□□ -0.3
CMTM3-204ENST00000562357 STHQ8IWL8 128 aa13.16□□□□□ -0.3
CMTM3-204ENST00000562357 OR51G1Q8NGK1 321 aa13.16□□□□□ -0.3
CMTM3-204ENST00000562357 LCE6AA0A183 80 aa13.15□□□□□ -0.3
CMTM3-204ENST00000562357 JTBO76095 146 aa13.15□□□□□ -0.3
CMTM3-204ENST00000562357 IFNA21P01568 189 aa13.15□□□□□ -0.3
CMTM3-204ENST00000562357 USF2Q15853 346 aaPredicted RBP13.15□□□□□ -0.3
CMTM3-204ENST00000562357 GGNBP1Q5YKI7 109 aa13.15□□□□□ -0.3
CMTM3-204ENST00000562357 LYG2Q86SG7 212 aa13.15□□□□□ -0.3
CMTM3-204ENST00000562357 A0A0J9YWU9 116 aa13.14□□□□□ -0.31
CMTM3-204ENST00000562357 C9orf170A2RU37 121 aa13.14□□□□□ -0.31
CMTM3-204ENST00000562357 K7EQG2 157 aa13.14□□□□□ -0.31
CMTM3-204ENST00000562357 WRBO00258 174 aa13.14□□□□□ -0.31
CMTM3-204ENST00000562357 SYNGR2O43760 224 aa13.14□□□□□ -0.31
CMTM3-204ENST00000562357 CA1P00915 261 aaPredicted RBP13.14□□□□□ -0.31
CMTM3-204ENST00000562357 PSG1P11464 419 aa13.14□□□□□ -0.31
CMTM3-204ENST00000562357 DHRS2Q13268 280 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms