RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 MAP1LC3B2A6NCE7 125 aa11.19□□□□□ -0.62
COMMD4-205ENST00000562310 LINC01548A6NM66 108 aa11.19□□□□□ -0.62
COMMD4-205ENST00000562310 G3V318 75 aa11.19□□□□□ -0.62
COMMD4-205ENST00000562310 OR2J3O76001 311 aa11.19□□□□□ -0.62
COMMD4-205ENST00000562310 IGHV3-48P01763 117 aa11.19□□□□□ -0.62
COMMD4-205ENST00000562310 LINC00869P0C866 280 aa11.19□□□□□ -0.62
COMMD4-205ENST00000562310 RHOBP62745 196 aa11.19□□□□□ -0.62
COMMD4-205ENST00000562310 BLCAPP62952 87 aa11.19□□□□□ -0.62
COMMD4-205ENST00000562310 RHOGP84095 191 aa11.19□□□□□ -0.62
COMMD4-205ENST00000562310 FAM122CQ6P4D5 195 aa11.19□□□□□ -0.62
COMMD4-205ENST00000562310 UQCC3Q6UW78 93 aa11.19□□□□□ -0.62
COMMD4-205ENST00000562310 RPP25LQ8N5L8 163 aaKnown RBP11.19□□□□□ -0.62
COMMD4-205ENST00000562310 BPIFCQ8NFQ6 507 aa11.19□□□□□ -0.62
COMMD4-205ENST00000562310 SFT2D1Q8WV19 159 aa11.19□□□□□ -0.62
COMMD4-205ENST00000562310 ATP6V0BQ99437 205 aa11.19□□□□□ -0.62
COMMD4-205ENST00000562310 PFDN5Q99471 154 aa11.19□□□□□ -0.62
COMMD4-205ENST00000562310 MAP1LC3BQ9GZQ8 125 aa11.19□□□□□ -0.62
COMMD4-205ENST00000562310 ZNF355PQ9NSJ1 428 aa11.19□□□□□ -0.62
COMMD4-205ENST00000562310 C21orf62Q9NYP8 219 aa11.19□□□□□ -0.62
COMMD4-205ENST00000562310 CDC42EP3Q9UKI2 254 aa11.19□□□□□ -0.62
COMMD4-205ENST00000562310 IGHV3-21A0A0B4J1V1 117 aa11.18□□□□□ -0.62
COMMD4-205ENST00000562310 A0A1W2PPV4 95 aa11.18□□□□□ -0.62
COMMD4-205ENST00000562310 GNG7O60262 68 aa11.18□□□□□ -0.62
COMMD4-205ENST00000562310 NDUFB8O95169 186 aa11.18□□□□□ -0.62
COMMD4-205ENST00000562310 IGLC1P0CG04 106 aa11.18□□□□□ -0.62
COMMD4-205ENST00000562310 S100A1P23297 94 aa11.18□□□□□ -0.62
COMMD4-205ENST00000562310 ZNF726P1Q15940 193 aa11.18□□□□□ -0.62
COMMD4-205ENST00000562310 OR1L4Q8NGR5 311 aa11.18□□□□□ -0.62
COMMD4-205ENST00000562310 SLC25A22Q9H936 323 aa11.18□□□□□ -0.62
COMMD4-205ENST00000562310 TMEM89A2RUT3 159 aa11.17□□□□□ -0.62
COMMD4-205ENST00000562310 CLDN34H7C241 214 aa11.17□□□□□ -0.62
COMMD4-205ENST00000562310 SPSB3Q6PJ21 355 aa11.17□□□□□ -0.62
COMMD4-205ENST00000562310 GATAD1Q8WUU5 269 aa11.17□□□□□ -0.62
COMMD4-205ENST00000562310 RAB24Q969Q5 203 aa11.17□□□□□ -0.62
COMMD4-205ENST00000562310 EEF1AKMT3Q96AZ1 226 aa11.17□□□□□ -0.62
COMMD4-205ENST00000562310 CITED4Q96RK1 184 aa11.17□□□□□ -0.62
COMMD4-205ENST00000562310 PBDC1Q9BVG4 233 aa11.17□□□□□ -0.62
COMMD4-205ENST00000562310 MRPL32Q9BYC8 188 aaKnown RBP11.17□□□□□ -0.62
COMMD4-205ENST00000562310 TRBV7-1A0A0A6YYK4 115 aa11.16□□□□□ -0.62
COMMD4-205ENST00000562310 DNAJC9-AS1A6NH13 148 aa11.16□□□□□ -0.62
COMMD4-205ENST00000562310 COX7A2P2O60397 106 aa11.16□□□□□ -0.62
COMMD4-205ENST00000562310 LY6G6DO95868 133 aa11.16□□□□□ -0.62
COMMD4-205ENST00000562310 OR5G3P0C626 314 aa11.16□□□□□ -0.62
COMMD4-205ENST00000562310 CD99P14209 185 aa11.16□□□□□ -0.62
COMMD4-205ENST00000562310 SRD5A1P18405 259 aa11.16□□□□□ -0.62
COMMD4-205ENST00000562310 PPIFP30405 207 aaKnown RBP11.16□□□□□ -0.62
COMMD4-205ENST00000562310 PLP1P60201 277 aa11.16□□□□□ -0.62
COMMD4-205ENST00000562310 YPEL3P61236 119 aaPredicted RBP11.16□□□□□ -0.62
COMMD4-205ENST00000562310 RPL15P61313 204 aaKnown RBP11.16□□□□□ -0.62
COMMD4-205ENST00000562310 CFHR3Q02985 330 aa11.16□□□□□ -0.62
COMMD4-205ENST00000562310 ZNF90Q03938 601 aa11.16□□□□□ -0.62
COMMD4-205ENST00000562310 C15orf32Q32M92 178 aa11.16□□□□□ -0.62
COMMD4-205ENST00000562310 Q56UQ5 140 aa11.16□□□□□ -0.62
COMMD4-205ENST00000562310 LCN15Q6UWW0 184 aa11.16□□□□□ -0.62
COMMD4-205ENST00000562310 Q8N2B8 174 aa11.16□□□□□ -0.62
COMMD4-205ENST00000562310 ZNF502Q8TBZ5 544 aa11.16□□□□□ -0.62
COMMD4-205ENST00000562310 ZNF702PQ9H963 129 aa11.16□□□□□ -0.62
COMMD4-205ENST00000562310 TLN2Q9Y4G6 2542 aa11.15□□□□□ -0.62
COMMD4-205ENST00000562310 ELOA3CA0A087WX78 387 aaPredicted RBP11.15□□□□□ -0.62
COMMD4-205ENST00000562310 TOMM40O96008 361 aa11.15□□□□□ -0.62
COMMD4-205ENST00000562310 IFNA1P01562 189 aa11.15□□□□□ -0.62
COMMD4-205ENST00000562310 IGKV1-17P01599 117 aa11.15□□□□□ -0.62
COMMD4-205ENST00000562310 TRGV3P03979 118 aa11.15□□□□□ -0.62
COMMD4-205ENST00000562310 TAGLN2P37802 199 aaKnown RBP11.15□□□□□ -0.62
COMMD4-205ENST00000562310 PPT1P50897 306 aa11.15□□□□□ -0.62
COMMD4-205ENST00000562310 ATP5G2Q06055 141 aa11.15□□□□□ -0.62
COMMD4-205ENST00000562310 PMS2P11Q13670 270 aa11.15□□□□□ -0.62
COMMD4-205ENST00000562310 TIGITQ495A1 244 aa11.15□□□□□ -0.62
COMMD4-205ENST00000562310 GCSAMLQ5JQS6 135 aa11.15□□□□□ -0.62
COMMD4-205ENST00000562310 SSX7Q7RTT5 188 aa11.15□□□□□ -0.62
COMMD4-205ENST00000562310 ZNF418Q8TF45 676 aaPredicted RBP11.15□□□□□ -0.62
COMMD4-205ENST00000562310 USMG5Q96IX5 58 aa11.15□□□□□ -0.62
COMMD4-205ENST00000562310 NOL4LQ96MY1 436 aaPredicted RBP11.15□□□□□ -0.62
COMMD4-205ENST00000562310 FAM210AQ96ND0 272 aa11.15□□□□□ -0.62
COMMD4-205ENST00000562310 FUT9Q9Y231 359 aa11.15□□□□□ -0.62
COMMD4-205ENST00000562310 PSMB11A5LHX3 300 aa11.14□□□□□ -0.63
COMMD4-205ENST00000562310 IGLV1-40P01703 118 aa11.14□□□□□ -0.63
COMMD4-205ENST00000562310 RD3LP0DJH9 198 aa11.14□□□□□ -0.63
COMMD4-205ENST00000562310 GATA2P23769 480 aaPredicted RBP11.14□□□□□ -0.63
COMMD4-205ENST00000562310 TPPP2P59282 170 aa11.14□□□□□ -0.63
COMMD4-205ENST00000562310 TAS2R45P59539 299 aa11.14□□□□□ -0.63
COMMD4-205ENST00000562310 SLC35B1P78383 322 aa11.14□□□□□ -0.63
COMMD4-205ENST00000562310 FAM209BQ5JX69 171 aa11.14□□□□□ -0.63
COMMD4-205ENST00000562310 C10orf113Q5VZT2 155 aa11.14□□□□□ -0.63
COMMD4-205ENST00000562310 Q6ZS46 218 aa11.14□□□□□ -0.63
COMMD4-205ENST00000562310 S100A7AQ86SG5 101 aa11.14□□□□□ -0.63
COMMD4-205ENST00000562310 SMDT1Q9H4I9 107 aa11.14□□□□□ -0.63
COMMD4-205ENST00000562310 DNAJC4Q9NNZ3 241 aa11.14□□□□□ -0.63
COMMD4-205ENST00000562310 LINC00527Q9UJ94 153 aa11.14□□□□□ -0.63
COMMD4-205ENST00000562310 A0A0G2JLM5 398 aa11.13□□□□□ -0.63
COMMD4-205ENST00000562310 A0A1B0GV50 99 aa11.13□□□□□ -0.63
COMMD4-205ENST00000562310 F8W735 103 aaPredicted RBP11.13□□□□□ -0.63
COMMD4-205ENST00000562310 NUPL2O15504 423 aaKnown RBP11.13□□□□□ -0.63
COMMD4-205ENST00000562310 HYPMO75409 117 aa11.13□□□□□ -0.63
COMMD4-205ENST00000562310 CXorf1O96002 111 aa11.13□□□□□ -0.63
COMMD4-205ENST00000562310 IGHG4P01861 327 aa11.13□□□□□ -0.63
COMMD4-205ENST00000562310 STAG3L2P0CL84 134 aa11.13□□□□□ -0.63
COMMD4-205ENST00000562310 STAG3L3P0CL85 134 aa11.13□□□□□ -0.63
COMMD4-205ENST00000562310 PSG1P11464 419 aa11.13□□□□□ -0.63
COMMD4-205ENST00000562310 PSMB3P49720 205 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms