RNA–Protein interactions for RNA: ENST00000561960.5

NSMCE1-202, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-202ENST00000561960 NAT1P18440 290 aa8.27□□□□□ -1.09
NSMCE1-202ENST00000561960 S100GP29377 79 aa8.27□□□□□ -1.09
NSMCE1-202ENST00000561960 OR10J1P30954 320 aa8.27□□□□□ -1.09
NSMCE1-202ENST00000561960 FUSP35637 526 aaKnown RBP eCLIP8.27□□□□□ -1.09
NSMCE1-202ENST00000561960 TRIM16LQ309B1 348 aa8.27□□□□□ -1.09
NSMCE1-202ENST00000561960 SOHLH1Q5JUK2 328 aa8.27□□□□□ -1.09
NSMCE1-202ENST00000561960 SIGLEC15Q6ZMC9 328 aa8.27□□□□□ -1.09
NSMCE1-202ENST00000561960 OR4X1Q8NH49 305 aa8.27□□□□□ -1.09
NSMCE1-202ENST00000561960 RNASE11Q8TAA1 199 aaKnown RBP8.27□□□□□ -1.09
NSMCE1-202ENST00000561960 ACY3Q96HD9 319 aa8.27□□□□□ -1.09
NSMCE1-202ENST00000561960 PDCD10Q9BUL8 212 aa8.27□□□□□ -1.09
NSMCE1-202ENST00000561960 PBDC1Q9BVG4 233 aa8.27□□□□□ -1.09
NSMCE1-202ENST00000561960 ENY2Q9NPA8 101 aa8.27□□□□□ -1.09
NSMCE1-202ENST00000561960 SCRT2Q9NQ03 307 aa8.27□□□□□ -1.09
NSMCE1-202ENST00000561960 YTHDF2Q9Y5A9 579 aaKnown RBP8.27□□□□□ -1.09
NSMCE1-202ENST00000561960 LOC102723971A0A1B0GUV8 181 aa8.26□□□□□ -1.09
NSMCE1-202ENST00000561960 ZNF705FA8MVS1 300 aaPredicted RBP8.26□□□□□ -1.09
NSMCE1-202ENST00000561960 P0C879 139 aa8.26□□□□□ -1.09
NSMCE1-202ENST00000561960 IGLC1P0CG04 106 aa8.26□□□□□ -1.09
NSMCE1-202ENST00000561960 ZNF705DP0CH99 300 aaPredicted RBP8.26□□□□□ -1.09
NSMCE1-202ENST00000561960 ZNF705BP0CI00 300 aaPredicted RBP8.26□□□□□ -1.09
NSMCE1-202ENST00000561960 HLA-DRB4P13762 266 aa8.26□□□□□ -1.09
NSMCE1-202ENST00000561960 RPS19P39019 145 aaKnown RBP8.26□□□□□ -1.09
NSMCE1-202ENST00000561960 PIGPP57054 158 aa8.26□□□□□ -1.09
NSMCE1-202ENST00000561960 SNRPD3P62318 126 aaKnown RBP8.26□□□□□ -1.09
NSMCE1-202ENST00000561960 FCN2Q15485 313 aa8.26□□□□□ -1.09
NSMCE1-202ENST00000561960 ZNF705AQ6ZN79 300 aaPredicted RBP8.26□□□□□ -1.09
NSMCE1-202ENST00000561960 ZNF709Q8N972 641 aa8.26□□□□□ -1.09
NSMCE1-202ENST00000561960 OR51G1Q8NGK1 321 aa8.26□□□□□ -1.09
NSMCE1-202ENST00000561960 C7orf50Q9BRJ6 194 aaKnown RBP8.26□□□□□ -1.09
NSMCE1-202ENST00000561960 C1QTNF4Q9BXJ3 329 aa8.26□□□□□ -1.09
NSMCE1-202ENST00000561960 YTHDF1Q9BYJ9 559 aaKnown RBP8.26□□□□□ -1.09
NSMCE1-202ENST00000561960 NRN1Q9NPD7 142 aa8.26□□□□□ -1.09
NSMCE1-202ENST00000561960 RFNGQ9Y644 331 aa8.26□□□□□ -1.09
NSMCE1-202ENST00000561960 U3KQE9 123 aa8.26□□□□□ -1.09
NSMCE1-202ENST00000561960 HLA-DRB4X5D2U9 266 aa8.26□□□□□ -1.09
NSMCE1-202ENST00000561960 RPS10-NUDT3A0A1W2PQS6 291 aa8.25□□□□□ -1.09
NSMCE1-202ENST00000561960 NUDT3O95989 172 aa8.25□□□□□ -1.09
NSMCE1-202ENST00000561960 SUB1P53999 127 aaKnown RBP eCLIP8.25□□□□□ -1.09
NSMCE1-202ENST00000561960 SCAND1P57086 179 aa8.25□□□□□ -1.09
NSMCE1-202ENST00000561960 DAD1P61803 113 aa8.25□□□□□ -1.09
NSMCE1-202ENST00000561960 NUTF2P61970 127 aaKnown RBP8.25□□□□□ -1.09
NSMCE1-202ENST00000561960 DLK1P80370 383 aa8.25□□□□□ -1.09
NSMCE1-202ENST00000561960 MEF2DQ14814 521 aa8.25□□□□□ -1.09
NSMCE1-202ENST00000561960 PRSS54Q6PEW0 395 aa8.25□□□□□ -1.09
NSMCE1-202ENST00000561960 CADM3Q8N126 398 aa8.25□□□□□ -1.09
NSMCE1-202ENST00000561960 C1orf158Q8N1D5 194 aa8.25□□□□□ -1.09
NSMCE1-202ENST00000561960 Q8WTZ3 238 aa8.25□□□□□ -1.09
NSMCE1-202ENST00000561960 NPIPB3Q92617 1050 aa8.25□□□□□ -1.09
NSMCE1-202ENST00000561960 ATG101Q9BSB4 218 aa8.25□□□□□ -1.09
NSMCE1-202ENST00000561960 PRR13Q9NZ81 148 aa8.25□□□□□ -1.09
NSMCE1-202ENST00000561960 COMMD3Q9UBI1 195 aa8.25□□□□□ -1.09
NSMCE1-202ENST00000561960 TMED3Q9Y3Q3 217 aa8.25□□□□□ -1.09
NSMCE1-202ENST00000561960 EIF2B2P49770 351 aaKnown RBP8.24□□□□□ -1.09
NSMCE1-202ENST00000561960 SPATA12Q7Z6I5 190 aa8.24□□□□□ -1.09
NSMCE1-202ENST00000561960 OR4D10Q8NGI6 311 aa8.24□□□□□ -1.09
NSMCE1-202ENST00000561960 GPX8Q8TED1 209 aa8.24□□□□□ -1.09
NSMCE1-202ENST00000561960 TMEM170AQ8WVE7 144 aa8.24□□□□□ -1.09
NSMCE1-202ENST00000561960 FCGR1BQ92637 280 aa8.24□□□□□ -1.09
NSMCE1-202ENST00000561960 HEYLQ9NQ87 328 aaPredicted RBP8.24□□□□□ -1.09
NSMCE1-202ENST00000561960 C3orf85A0A1B0GTC6 90 aa8.23□□□□□ -1.09
NSMCE1-202ENST00000561960 ZNF705GA8MUZ8 300 aaPredicted RBP8.23□□□□□ -1.09
NSMCE1-202ENST00000561960 CDK2AP2O75956 126 aa8.23□□□□□ -1.09
NSMCE1-202ENST00000561960 DEFB130BP0DP73 79 aa8.23□□□□□ -1.09
NSMCE1-202ENST00000561960 DEFB130AP0DP74 79 aa8.23□□□□□ -1.09
NSMCE1-202ENST00000561960 ELK1P19419 428 aa8.23□□□□□ -1.09
NSMCE1-202ENST00000561960 RORCP51449 518 aa8.23□□□□□ -1.09
NSMCE1-202ENST00000561960 FAM78BQ5VT40 261 aa8.23□□□□□ -1.09
NSMCE1-202ENST00000561960 FAAP20Q6NZ36 180 aa8.23□□□□□ -1.09
NSMCE1-202ENST00000561960 LPCAT3Q6P1A2 487 aa8.23□□□□□ -1.09
NSMCE1-202ENST00000561960 ARRDC1Q8N5I2 433 aa8.23□□□□□ -1.09
NSMCE1-202ENST00000561960 OR1S2Q8NGQ3 325 aa8.23□□□□□ -1.09
NSMCE1-202ENST00000561960 COQ8AQ8NI60 647 aa8.23□□□□□ -1.09
NSMCE1-202ENST00000561960 LHFPL5Q8TAF8 219 aa8.23□□□□□ -1.09
NSMCE1-202ENST00000561960 GPR146Q96CH1 333 aa8.23□□□□□ -1.09
NSMCE1-202ENST00000561960 C20orf173Q96LM9 149 aa8.23□□□□□ -1.09
NSMCE1-202ENST00000561960 VCX3BQ9H321 246 aa8.23□□□□□ -1.09
NSMCE1-202ENST00000561960 RAB26Q9ULW5 256 aa8.23□□□□□ -1.09
NSMCE1-202ENST00000561960 FAT1Q14517 4588 aa8.23□□□□□ -1.09
NSMCE1-202ENST00000561960 MYCBP2O75592 4640 aa8.23□□□□□ -1.09
NSMCE1-202ENST00000561960 VPS13BQ7Z7G8 4022 aa8.22□□□□□ -1.09
NSMCE1-202ENST00000561960 NBDYA0A0U1RRE5 68 aa8.22□□□□□ -1.09
NSMCE1-202ENST00000561960 CEBPZOSA8MTT3 80 aa8.22□□□□□ -1.09
NSMCE1-202ENST00000561960 CORTO00230 105 aa8.22□□□□□ -1.09
NSMCE1-202ENST00000561960 BUB3O43684 328 aa8.22□□□□□ -1.09
NSMCE1-202ENST00000561960 HPGDSO60760 199 aa8.22□□□□□ -1.09
NSMCE1-202ENST00000561960 HBE1P02100 147 aa8.22□□□□□ -1.09
NSMCE1-202ENST00000561960 PSG1P11464 419 aa8.22□□□□□ -1.09
NSMCE1-202ENST00000561960 RCVRNP35243 200 aa8.22□□□□□ -1.09
NSMCE1-202ENST00000561960 KRTAP10-2P60368 255 aa8.22□□□□□ -1.09
NSMCE1-202ENST00000561960 BSXQ3C1V8 233 aa8.22□□□□□ -1.09
NSMCE1-202ENST00000561960 RNF212Q495C1 297 aa8.22□□□□□ -1.09
NSMCE1-202ENST00000561960 SCGB2B2Q4G0G5 96 aa8.22□□□□□ -1.09
NSMCE1-202ENST00000561960 IGFL4Q6B9Z1 124 aa8.22□□□□□ -1.09
NSMCE1-202ENST00000561960 Q8N1X5 172 aa8.22□□□□□ -1.09
NSMCE1-202ENST00000561960 C6orf223Q8N319 242 aa8.22□□□□□ -1.09
NSMCE1-202ENST00000561960 RRNAD1Q96FB5 475 aaKnown RBP8.22□□□□□ -1.09
NSMCE1-202ENST00000561960 UHRF2Q96PU4 802 aa8.22□□□□□ -1.09
NSMCE1-202ENST00000561960 SAV1Q9H4B6 383 aaPredicted RBP8.22□□□□□ -1.09
NSMCE1-202ENST00000561960 KLK11Q9UBX7 282 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms