RNA–Protein interactions for RNA: ENST00000561945.1

SPG7-205, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 411 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-205ENST00000561945 IGLC1P0CG04 106 aa10.51□□□□□ -0.73
SPG7-205ENST00000561945 HLA-DMBP28068 263 aa10.51□□□□□ -0.73
SPG7-205ENST00000561945 HOXA1P49639 335 aaPredicted RBP10.51□□□□□ -0.73
SPG7-205ENST00000561945 SPCS3P61009 180 aa10.51□□□□□ -0.73
SPG7-205ENST00000561945 YPEL3P61236 119 aaPredicted RBP10.51□□□□□ -0.73
SPG7-205ENST00000561945 CCDC71LQ8N9Z2 235 aa10.51□□□□□ -0.73
SPG7-205ENST00000561945 STXBP6Q8NFX7 210 aa10.51□□□□□ -0.73
SPG7-205ENST00000561945 OR52I2Q8NH67 350 aa10.51□□□□□ -0.73
SPG7-205ENST00000561945 ZFAND1Q8TCF1 268 aa10.51□□□□□ -0.73
SPG7-205ENST00000561945 GLMPQ8WWB7 406 aa10.51□□□□□ -0.73
SPG7-205ENST00000561945 RABL2AQ9UBK7 228 aaPredicted RBP10.51□□□□□ -0.73
SPG7-205ENST00000561945 RABL2BQ9UNT1 228 aa10.51□□□□□ -0.73
SPG7-205ENST00000561945 TRAV10A0A0B4J240 114 aa10.5□□□□□ -0.73
SPG7-205ENST00000561945 HELTA6NFD8 242 aa10.5□□□□□ -0.73
SPG7-205ENST00000561945 CTDSP2O14595 271 aa10.5□□□□□ -0.73
SPG7-205ENST00000561945 HTR2BP41595 481 aa10.5□□□□□ -0.73
SPG7-205ENST00000561945 AP2S1P53680 142 aaPredicted RBP10.5□□□□□ -0.73
SPG7-205ENST00000561945 TIGITQ495A1 244 aa10.5□□□□□ -0.73
SPG7-205ENST00000561945 C2orf83Q53S99 150 aa10.5□□□□□ -0.73
SPG7-205ENST00000561945 C16orf54Q6UWD8 224 aa10.5□□□□□ -0.73
SPG7-205ENST00000561945 Q6ZTC4 211 aa10.5□□□□□ -0.73
SPG7-205ENST00000561945 TMEM229BQ8NBD8 167 aa10.5□□□□□ -0.73
SPG7-205ENST00000561945 OR4D10Q8NGI6 311 aa10.5□□□□□ -0.73
SPG7-205ENST00000561945 OR1S2Q8NGQ3 325 aa10.5□□□□□ -0.73
SPG7-205ENST00000561945 OR13C8Q8NGS7 320 aa10.5□□□□□ -0.73
SPG7-205ENST00000561945 RNASEH2CQ8TDP1 164 aaKnown RBP10.5□□□□□ -0.73
SPG7-205ENST00000561945 TMEM230Q96A57 120 aa10.5□□□□□ -0.73
SPG7-205ENST00000561945 RRNAD1Q96FB5 475 aaKnown RBP10.5□□□□□ -0.73
SPG7-205ENST00000561945 ABHD1Q96SE0 405 aa10.5□□□□□ -0.73
SPG7-205ENST00000561945 RNF126Q9BV68 326 aa10.5□□□□□ -0.73
SPG7-205ENST00000561945 TMEM222Q9H0R3 208 aa10.5□□□□□ -0.73
SPG7-205ENST00000561945 COPZ2Q9P299 210 aa10.5□□□□□ -0.73
SPG7-205ENST00000561945 IGHV4-4A0A075B6R2 117 aa10.49□□□□□ -0.73
SPG7-205ENST00000561945 RPS10-NUDT3A0A1W2PQS6 291 aa10.49□□□□□ -0.73
SPG7-205ENST00000561945 KNCNA6PVL3 124 aa10.49□□□□□ -0.73
SPG7-205ENST00000561945 AMBPP02760 352 aa10.49□□□□□ -0.73
SPG7-205ENST00000561945 ZNF688P0C7X2 276 aa10.49□□□□□ -0.73
SPG7-205ENST00000561945 SLC25A4P12235 298 aa10.49□□□□□ -0.73
SPG7-205ENST00000561945 EIF2B2P49770 351 aaKnown RBP10.49□□□□□ -0.73
SPG7-205ENST00000561945 TRIM16LQ309B1 348 aa10.49□□□□□ -0.73
SPG7-205ENST00000561945 SP6Q3SY56 376 aa10.49□□□□□ -0.73
SPG7-205ENST00000561945 PRSS54Q6PEW0 395 aa10.49□□□□□ -0.73
SPG7-205ENST00000561945 GLYATL2Q8WU03 294 aa10.49□□□□□ -0.73
SPG7-205ENST00000561945 TMEM170AQ8WVE7 144 aa10.49□□□□□ -0.73
SPG7-205ENST00000561945 NARS2Q96I59 477 aaKnown RBP10.49□□□□□ -0.73
SPG7-205ENST00000561945 ENY2Q9NPA8 101 aa10.49□□□□□ -0.73
SPG7-205ENST00000561945 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.49□□□□□ -0.73
SPG7-205ENST00000561945 TAS2R19P59542 299 aa10.48□□□□□ -0.73
SPG7-205ENST00000561945 MRPS10P82664 201 aaKnown RBP10.48□□□□□ -0.73
SPG7-205ENST00000561945 SSBP1Q04837 148 aaKnown RBP10.48□□□□□ -0.73
SPG7-205ENST00000561945 SURF2Q15527 256 aaPredicted RBP10.48□□□□□ -0.73
SPG7-205ENST00000561945 ACTL10Q5JWF8 245 aa10.48□□□□□ -0.73
SPG7-205ENST00000561945 LINC00336Q6ZUF6 198 aa10.48□□□□□ -0.73
SPG7-205ENST00000561945 MCFD2Q8NI22 146 aa10.48□□□□□ -0.73
SPG7-205ENST00000561945 LHFPL5Q8TAF8 219 aa10.48□□□□□ -0.73
SPG7-205ENST00000561945 DIRAS2Q96HU8 199 aa10.48□□□□□ -0.73
SPG7-205ENST00000561945 RAB40CQ96S21 281 aa10.48□□□□□ -0.73
SPG7-205ENST00000561945 RTBDNQ9BSG5 229 aaPredicted RBP10.48□□□□□ -0.73
SPG7-205ENST00000561945 MIXL1Q9H2W2 232 aa10.48□□□□□ -0.73
SPG7-205ENST00000561945 RSL24D1Q9UHA3 163 aaKnown RBP10.48□□□□□ -0.73
SPG7-205ENST00000561945 TBC1D24Q9ULP9 559 aa10.48□□□□□ -0.73
SPG7-205ENST00000561945 HSPG2P98160 4391 aa10.47□□□□□ -0.73
SPG7-205ENST00000561945 TEX13DA0A0J9YY54 714 aaPredicted RBP10.47□□□□□ -0.73
SPG7-205ENST00000561945 A0A1B0GVY2 172 aa10.47□□□□□ -0.73
SPG7-205ENST00000561945 ZNF701M0R085 212 aaPredicted RBP10.47□□□□□ -0.73
SPG7-205ENST00000561945 BUB3O43684 328 aa10.47□□□□□ -0.73
SPG7-205ENST00000561945 HNRNPCP07910 306 aaKnown RBP eCLIP10.47□□□□□ -0.736e-15■□□□□ 8.5
SPG7-205ENST00000561945 DHRS2Q13268 280 aa10.47□□□□□ -0.73
SPG7-205ENST00000561945 USF2Q15853 346 aaPredicted RBP10.47□□□□□ -0.73
SPG7-205ENST00000561945 SELENOHQ8IZQ5 122 aaKnown RBP10.47□□□□□ -0.73
SPG7-205ENST00000561945 MARCH1Q8TCQ1 289 aa10.47□□□□□ -0.73
SPG7-205ENST00000561945 Q8WTZ3 238 aa10.47□□□□□ -0.73
SPG7-205ENST00000561945 RBPMSQ93062 196 aaKnown RBP10.47□□□□□ -0.73
SPG7-205ENST00000561945 SLIRPQ9GZT3 109 aaKnown RBP10.47□□□□□ -0.73
SPG7-205ENST00000561945 NDUFA13Q9P0J0 144 aa10.47□□□□□ -0.73
SPG7-205ENST00000561945 TMEM56-RWDD3S4R434 201 aa10.47□□□□□ -0.73
SPG7-205ENST00000561945 FAM90A26D6RGX4 464 aa10.46□□□□□ -0.73
SPG7-205ENST00000561945 GABARAPH6UMI1 98 aa10.46□□□□□ -0.73
SPG7-205ENST00000561945 RAB3DO95716 219 aa10.46□□□□□ -0.73
SPG7-205ENST00000561945 OR5AC1P0C628 307 aa10.46□□□□□ -0.73
SPG7-205ENST00000561945 RND2P52198 227 aa10.46□□□□□ -0.73
SPG7-205ENST00000561945 DHODHQ02127 395 aa10.46□□□□□ -0.73
SPG7-205ENST00000561945 IL18Q14116 193 aa10.46□□□□□ -0.73
SPG7-205ENST00000561945 C12orf74Q32Q52 190 aa10.46□□□□□ -0.73
SPG7-205ENST00000561945 RNASE12Q5GAN4 147 aaKnown RBP10.46□□□□□ -0.73
SPG7-205ENST00000561945 NMSQ5H8A3 153 aa10.46□□□□□ -0.73
SPG7-205ENST00000561945 STEAP1BQ6NZ63 245 aa10.46□□□□□ -0.73
SPG7-205ENST00000561945 SLC24A4Q8NFF2 622 aa10.46□□□□□ -0.73
SPG7-205ENST00000561945 NEU1Q99519 415 aa10.46□□□□□ -0.73
SPG7-205ENST00000561945 C1QTNF4Q9BXJ3 329 aa10.46□□□□□ -0.73
SPG7-205ENST00000561945 NAA60Q9H7X0 242 aa10.46□□□□□ -0.73
SPG7-205ENST00000561945 NRN1Q9NPD7 142 aa10.46□□□□□ -0.73
SPG7-205ENST00000561945 CACFD1Q9UGQ2 172 aa10.46□□□□□ -0.73
SPG7-205ENST00000561945 CELA1Q9UNI1 258 aa10.46□□□□□ -0.73
SPG7-205ENST00000561945 H3BMM0 161 aa10.45□□□□□ -0.74
SPG7-205ENST00000561945 NXPH3O95157 252 aa10.45□□□□□ -0.74
SPG7-205ENST00000561945 TOMM40O96008 361 aa10.45□□□□□ -0.74
SPG7-205ENST00000561945 OR10J1P30954 320 aa10.45□□□□□ -0.74
SPG7-205ENST00000561945 NUTF2P61970 127 aaKnown RBP10.45□□□□□ -0.74
SPG7-205ENST00000561945 MEF2DQ14814 521 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms