RNA–Protein interactions for RNA: ENST00000561749.1

SMPD3-202, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 2

Gene SMPD3, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-202ENST00000561749 C8orf88P0DMB2 117 aa17.66■□□□□ 0.42
SMPD3-202ENST00000561749 OR10J1P30954 320 aa17.66■□□□□ 0.42
SMPD3-202ENST00000561749 RPP30P78346 268 aaKnown RBP17.66■□□□□ 0.42
SMPD3-202ENST00000561749 GSG1LQ6UXU4 331 aa17.66■□□□□ 0.42
SMPD3-202ENST00000561749 TMEM116Q8NCL8 245 aa17.66■□□□□ 0.42
SMPD3-202ENST00000561749 OR2K2Q8NGT1 345 aa17.66■□□□□ 0.42
SMPD3-202ENST00000561749 WDR89Q96FK6 387 aaPredicted RBP17.66■□□□□ 0.42
SMPD3-202ENST00000561749 C2orf50Q96LR7 162 aa17.66■□□□□ 0.42
SMPD3-202ENST00000561749 RCL1Q9Y2P8 373 aaKnown RBP17.66■□□□□ 0.42
SMPD3-202ENST00000561749 STRAPQ9Y3F4 350 aaKnown RBP17.66■□□□□ 0.42
SMPD3-202ENST00000561749 TRAV30A0A087WSZ9 112 aa17.65■□□□□ 0.42
SMPD3-202ENST00000561749 SCGB2A1O75556 95 aa17.65■□□□□ 0.42
SMPD3-202ENST00000561749 PAX9P55771 341 aa17.65■□□□□ 0.42
SMPD3-202ENST00000561749 GUCA2BQ16661 112 aa17.65■□□□□ 0.42
SMPD3-202ENST00000561749 TMEM61Q8N0U2 210 aa17.65■□□□□ 0.42
SMPD3-202ENST00000561749 OR1S2Q8NGQ3 325 aa17.65■□□□□ 0.42
SMPD3-202ENST00000561749 SLC35E1Q96K37 410 aa17.65■□□□□ 0.42
SMPD3-202ENST00000561749 ZFAND3Q9H8U3 227 aa17.65■□□□□ 0.42
SMPD3-202ENST00000561749 LSM5Q9Y4Y9 91 aaKnown RBP17.65■□□□□ 0.42
SMPD3-202ENST00000561749 IGHV3OR16-13A0A075B7E8 117 aa17.64■□□□□ 0.41
SMPD3-202ENST00000561749 IGHV3-74A0A0B4J1X5 117 aa17.64■□□□□ 0.41
SMPD3-202ENST00000561749 SNRPGP15A8MWD9 76 aa17.64■□□□□ 0.41
SMPD3-202ENST00000561749 K7EMT4 169 aa17.64■□□□□ 0.41
SMPD3-202ENST00000561749 GOSR2O14653 212 aa17.64■□□□□ 0.41
SMPD3-202ENST00000561749 SIX6O95475 246 aa17.64■□□□□ 0.41
SMPD3-202ENST00000561749 GPX4P36969 197 aaPredicted RBP17.64■□□□□ 0.41
SMPD3-202ENST00000561749 SMIM8Q96KF7 97 aa17.64■□□□□ 0.41
SMPD3-202ENST00000561749 LSM4Q9Y4Z0 139 aaKnown RBP17.64■□□□□ 0.41
SMPD3-202ENST00000561749 SCAF4O95104 1147 aaKnown RBP17.63■□□□□ 0.41
SMPD3-202ENST00000561749 GAMTQ14353 236 aa17.63■□□□□ 0.41
SMPD3-202ENST00000561749 IGHV7-4-1A0A0J9YVY3 117 aa17.62■□□□□ 0.41
SMPD3-202ENST00000561749 ZNF785A8K8V0 405 aa17.62■□□□□ 0.41
SMPD3-202ENST00000561749 PRSS46E5RG02 174 aa17.62■□□□□ 0.41
SMPD3-202ENST00000561749 K7EPK0 472 aa17.62■□□□□ 0.41
SMPD3-202ENST00000561749 CCNKO75909 580 aa17.62■□□□□ 0.41
SMPD3-202ENST00000561749 RAB40CQ96S21 281 aa17.62■□□□□ 0.41
SMPD3-202ENST00000561749 GINS3Q9BRX5 216 aa17.62■□□□□ 0.41
SMPD3-202ENST00000561749 SMPXQ9UHP9 88 aa17.62■□□□□ 0.41
SMPD3-202ENST00000561749 TRAV14DV4A0A0A6YYC5 116 aa17.61■□□□□ 0.41
SMPD3-202ENST00000561749 PTTG1O95997 202 aa17.61■□□□□ 0.41
SMPD3-202ENST00000561749 S100A10P60903 97 aa17.61■□□□□ 0.41
SMPD3-202ENST00000561749 DCTN2Q13561 401 aaKnown RBP17.61■□□□□ 0.41
SMPD3-202ENST00000561749 OR8G2PQ6IF36 304 aa17.61■□□□□ 0.41
SMPD3-202ENST00000561749 RHPN1-AS1Q9BWJ2 59 aa17.61■□□□□ 0.41
SMPD3-202ENST00000561749 ZFP92A6NM28 416 aa17.6■□□□□ 0.41
SMPD3-202ENST00000561749 L7N2F9 121 aa17.6■□□□□ 0.41
SMPD3-202ENST00000561749 METTL15P1P0C7V9 234 aa17.6■□□□□ 0.41
SMPD3-202ENST00000561749 VAMP2P63027 116 aa17.6■□□□□ 0.41
SMPD3-202ENST00000561749 Q8N1Y9 231 aa17.6■□□□□ 0.41
SMPD3-202ENST00000561749 SMAD5-AS1Q9Y6J3 95 aa17.6■□□□□ 0.41
SMPD3-202ENST00000561749 IGHV3-66A0A0C4DH42 116 aa17.59■□□□□ 0.41
SMPD3-202ENST00000561749 C7orf66A4D0T2 115 aa17.59■□□□□ 0.41
SMPD3-202ENST00000561749 CHEK1O14757 476 aa17.59■□□□□ 0.41
SMPD3-202ENST00000561749 SSNA1O43805 119 aa17.59■□□□□ 0.41
SMPD3-202ENST00000561749 APOHP02749 345 aaPredicted RBP17.59■□□□□ 0.41
SMPD3-202ENST00000561749 YPEL3P61236 119 aaPredicted RBP17.59■□□□□ 0.41
SMPD3-202ENST00000561749 RAB32Q13637 225 aa17.59■□□□□ 0.41
SMPD3-202ENST00000561749 RBPMS2Q6ZRY4 209 aaKnown RBP17.59■□□□□ 0.41
SMPD3-202ENST00000561749 ACOT7LQ6ZUV0 252 aa17.59■□□□□ 0.41
SMPD3-202ENST00000561749 Q8WTZ3 238 aa17.59■□□□□ 0.41
SMPD3-202ENST00000561749 PRKDCP78527 4128 aaKnown RBP17.58■□□□□ 0.4
SMPD3-202ENST00000561749 IGKV1D-37A0A075B6S9 117 aa17.58■□□□□ 0.4
SMPD3-202ENST00000561749 PMS2P5A8MQ11 134 aa17.58■□□□□ 0.4
SMPD3-202ENST00000561749 TSC22D2O75157 780 aa17.58■□□□□ 0.4
SMPD3-202ENST00000561749 TAS2R30P59541 319 aa17.58■□□□□ 0.4
SMPD3-202ENST00000561749 CD81P60033 236 aa17.58■□□□□ 0.4
SMPD3-202ENST00000561749 IL15RAQ13261 267 aa17.58■□□□□ 0.4
SMPD3-202ENST00000561749 TMEM14EPQ6UXP3 125 aa17.58■□□□□ 0.4
SMPD3-202ENST00000561749 GTSCR1Q86UQ5 136 aa17.58■□□□□ 0.4
SMPD3-202ENST00000561749 ST8SIA2Q92186 375 aa17.58■□□□□ 0.4
SMPD3-202ENST00000561749 RNF2Q99496 336 aa17.58■□□□□ 0.4
SMPD3-202ENST00000561749 TOMM40O96008 361 aa17.57■□□□□ 0.4
SMPD3-202ENST00000561749 CD7P09564 240 aa17.57■□□□□ 0.4
SMPD3-202ENST00000561749 RD3LP0DJH9 198 aa17.57■□□□□ 0.4
SMPD3-202ENST00000561749 RRAS2P62070 204 aaPredicted RBP17.57■□□□□ 0.4
SMPD3-202ENST00000561749 ZNF90Q03938 601 aa17.57■□□□□ 0.4
SMPD3-202ENST00000561749 SMCO3A2RU48 225 aa17.56■□□□□ 0.4
SMPD3-202ENST00000561749 IL4P05112 153 aa17.56■□□□□ 0.4
SMPD3-202ENST00000561749 PSG1P11464 419 aa17.56■□□□□ 0.4
SMPD3-202ENST00000561749 NPPCP23582 126 aa17.56■□□□□ 0.4
SMPD3-202ENST00000561749 BCAP31P51572 246 aa17.56■□□□□ 0.4
SMPD3-202ENST00000561749 AKR1C1Q04828 323 aa17.56■□□□□ 0.4
SMPD3-202ENST00000561749 OR2F1Q13607 317 aa17.56■□□□□ 0.4
SMPD3-202ENST00000561749 METTL26Q96S19 204 aa17.56■□□□□ 0.4
SMPD3-202ENST00000561749 NEURL2Q9BR09 285 aa17.56■□□□□ 0.4
SMPD3-202ENST00000561749 C11orf1Q9H5F2 150 aa17.56■□□□□ 0.4
SMPD3-202ENST00000561749 ALG5Q9Y673 324 aa17.56■□□□□ 0.4
SMPD3-202ENST00000561749 IGKV3-7A0A075B6H7 116 aa17.55■□□□□ 0.4
SMPD3-202ENST00000561749 IGKV1OR2-108A0A075B7D4 117 aa17.55■□□□□ 0.4
SMPD3-202ENST00000561749 TRAV25A0A0B4J276 109 aa17.55■□□□□ 0.4
SMPD3-202ENST00000561749 USF2Q15853 346 aaPredicted RBP17.55■□□□□ 0.4
SMPD3-202ENST00000561749 LAMTOR1Q6IAA8 161 aa17.55■□□□□ 0.4
SMPD3-202ENST00000561749 LILRB2Q8N423 598 aa17.55■□□□□ 0.4
SMPD3-202ENST00000561749 WFDC10AQ9H1F0 79 aa17.55■□□□□ 0.4
SMPD3-202ENST00000561749 FAM24AA6NFZ4 105 aa17.54■□□□□ 0.4
SMPD3-202ENST00000561749 CAV2P51636 162 aa17.54■□□□□ 0.4
SMPD3-202ENST00000561749 ARL16Q0P5N6 197 aa17.54■□□□□ 0.4
SMPD3-202ENST00000561749 THAP8Q8NA92 274 aa17.54■□□□□ 0.4
SMPD3-202ENST00000561749 OR51G1Q8NGK1 321 aa17.54■□□□□ 0.4
SMPD3-202ENST00000561749 MGAT4CQ9UBM8 478 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms