RNA–Protein interactions for RNA: ENST00000561400.1

HERC1-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-214ENST00000561400 SOX21Q9Y651 276 aaPredicted RBP9.4□□□□□ -0.9
HERC1-214ENST00000561400 FN1P02751 2386 aaKnown RBP9.4□□□□□ -0.9
HERC1-214ENST00000561400 IGKV1D-13A0A0B4J2D9 117 aa9.4□□□□□ -0.91
HERC1-214ENST00000561400 IGKV1-13P0DP09 117 aa9.4□□□□□ -0.91
HERC1-214ENST00000561400 AADACP22760 399 aa9.4□□□□□ -0.91
HERC1-214ENST00000561400 SAA4P35542 130 aa9.4□□□□□ -0.91
HERC1-214ENST00000561400 Q6ZN92 141 aa9.4□□□□□ -0.91
HERC1-214ENST00000561400 Q6ZRG5 221 aa9.4□□□□□ -0.91
HERC1-214ENST00000561400 ODF3L1Q8IXM7 274 aa9.4□□□□□ -0.91
HERC1-214ENST00000561400 LINC00311Q8N616 119 aa9.4□□□□□ -0.91
HERC1-214ENST00000561400 AJUBAQ96IF1 538 aa9.4□□□□□ -0.91
HERC1-214ENST00000561400 ABHD14BQ96IU4 210 aa9.4□□□□□ -0.91
HERC1-214ENST00000561400 PSMG3Q9BT73 122 aaPredicted RBP9.4□□□□□ -0.91
HERC1-214ENST00000561400 RSG1Q9BU20 258 aa9.4□□□□□ -0.91
HERC1-214ENST00000561400 EIF5A2Q9GZV4 153 aaKnown RBP9.4□□□□□ -0.91
HERC1-214ENST00000561400 IFI27L2Q9H2X8 130 aa9.4□□□□□ -0.91
HERC1-214ENST00000561400 SRD5A3Q9H8P0 318 aa9.4□□□□□ -0.91
HERC1-214ENST00000561400 TMEM160Q9NX00 188 aa9.4□□□□□ -0.91
HERC1-214ENST00000561400 BUB1B-PAK6H3BSN5 160 aa9.39□□□□□ -0.91
HERC1-214ENST00000561400 NPFFO15130 113 aa9.39□□□□□ -0.91
HERC1-214ENST00000561400 PPYP01298 95 aa9.39□□□□□ -0.91
HERC1-214ENST00000561400 AMY2AP04746 511 aa9.39□□□□□ -0.91
HERC1-214ENST00000561400 CTRLP40313 264 aa9.39□□□□□ -0.91
HERC1-214ENST00000561400 RPL23AP62750 156 aaKnown RBP9.39□□□□□ -0.91
HERC1-214ENST00000561400 OR52E5Q8NH55 327 aa9.39□□□□□ -0.91
HERC1-214ENST00000561400 IMMP2LQ96T52 175 aa9.39□□□□□ -0.91
HERC1-214ENST00000561400 SLC25A21Q9BQT8 299 aaPredicted RBP9.39□□□□□ -0.91
HERC1-214ENST00000561400 VPREB3Q9UKI3 123 aa9.39□□□□□ -0.91
HERC1-214ENST00000561400 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.39□□□□□ -0.91
HERC1-214ENST00000561400 H0Y980 276 aa9.39□□□□□ -0.91
HERC1-214ENST00000561400 H3BQ15 152 aa9.39□□□□□ -0.91
HERC1-214ENST00000561400 RAB29O14966 203 aa9.39□□□□□ -0.91
HERC1-214ENST00000561400 IGLC1P0CG04 106 aa9.39□□□□□ -0.91
HERC1-214ENST00000561400 DIAPH2-AS1Q14236 149 aa9.39□□□□□ -0.91
HERC1-214ENST00000561400 AMMECR1LQ6DCA0 310 aa9.39□□□□□ -0.91
HERC1-214ENST00000561400 BCL6BQ8N143 479 aaPredicted RBP9.39□□□□□ -0.91
HERC1-214ENST00000561400 LGI3Q8N145 548 aa9.39□□□□□ -0.91
HERC1-214ENST00000561400 QTRT1Q9BXR0 403 aaKnown RBP9.39□□□□□ -0.91
HERC1-214ENST00000561400 TMEM242Q9NWH2 141 aa9.39□□□□□ -0.91
HERC1-214ENST00000561400 THYN1Q9P016 225 aa9.39□□□□□ -0.91
HERC1-214ENST00000561400 A0A1B0GW64 132 aa9.38□□□□□ -0.91
HERC1-214ENST00000561400 IGLC7A0M8Q6 106 aa9.38□□□□□ -0.91
HERC1-214ENST00000561400 INAFM1C9JVW0 142 aa9.38□□□□□ -0.91
HERC1-214ENST00000561400 PROP1O75360 226 aa9.38□□□□□ -0.91
HERC1-214ENST00000561400 HTR1DP28221 377 aa9.38□□□□□ -0.91
HERC1-214ENST00000561400 FXYD4P59646 89 aa9.38□□□□□ -0.91
HERC1-214ENST00000561400 LRRC37A5PQ49AS3 106 aa9.38□□□□□ -0.91
HERC1-214ENST00000561400 MIDNQ504T8 468 aa9.38□□□□□ -0.91
HERC1-214ENST00000561400 LHFPL1Q86WI0 220 aa9.38□□□□□ -0.91
HERC1-214ENST00000561400 NECAP1Q8NC96 275 aa9.38□□□□□ -0.91
HERC1-214ENST00000561400 ST6GALNAC6Q969X2 333 aa9.38□□□□□ -0.91
HERC1-214ENST00000561400 CUBNO60494 3623 aa9.38□□□□□ -0.91
HERC1-214ENST00000561400 LY6LH3BQJ8 138 aa9.37□□□□□ -0.91
HERC1-214ENST00000561400 HYPMO75409 117 aa9.37□□□□□ -0.91
HERC1-214ENST00000561400 IGLC2P0DOY2 106 aa9.37□□□□□ -0.91
HERC1-214ENST00000561400 IGLC3P0DOY3 106 aa9.37□□□□□ -0.91
HERC1-214ENST00000561400 LGALS4P56470 323 aa9.37□□□□□ -0.91
HERC1-214ENST00000561400 DYNAPQ8N1N2 210 aa9.37□□□□□ -0.91
HERC1-214ENST00000561400 CTDSP1Q9GZU7 261 aa9.37□□□□□ -0.91
HERC1-214ENST00000561400 OR2D2Q9H210 308 aa9.37□□□□□ -0.91
HERC1-214ENST00000561400 DPM3Q9P2X0 92 aa9.37□□□□□ -0.91
HERC1-214ENST00000561400 SAA2-SAA4A0A096LPE2 208 aa9.37□□□□□ -0.91
HERC1-214ENST00000561400 SLC17A3O00476 420 aa9.37□□□□□ -0.91
HERC1-214ENST00000561400 TAX1BP3O14907 124 aa9.37□□□□□ -0.91
HERC1-214ENST00000561400 IGLV2-14P01704 120 aa9.37□□□□□ -0.91
HERC1-214ENST00000561400 SAA2P0DJI9 122 aaPredicted RBP9.37□□□□□ -0.91
HERC1-214ENST00000561400 ZNF137PP52743 207 aa9.37□□□□□ -0.91
HERC1-214ENST00000561400 HSD52Q0P140 79 aa9.37□□□□□ -0.91
HERC1-214ENST00000561400 DERL1Q9BUN8 251 aa9.37□□□□□ -0.91
HERC1-214ENST00000561400 HILPDAQ9Y5L2 63 aa9.37□□□□□ -0.91
HERC1-214ENST00000561400 NIPBLQ6KC79 2804 aaeCLIP9.37□□□□□ -0.911e-6■■■■□ 19.4
HERC1-214ENST00000561400 B4DEV8 164 aa9.36□□□□□ -0.91
HERC1-214ENST00000561400 FAUP35544 74 aaKnown RBP9.36□□□□□ -0.91
HERC1-214ENST00000561400 REG1BP48304 166 aa9.36□□□□□ -0.91
HERC1-214ENST00000561400 HERV-K104P61576 105 aa9.36□□□□□ -0.91
HERC1-214ENST00000561400 RUNX1Q01196 453 aa9.36□□□□□ -0.91
HERC1-214ENST00000561400 TMEM267Q0VDI3 215 aaPredicted RBP9.36□□□□□ -0.91
HERC1-214ENST00000561400 ZNF266Q14584 549 aa9.36□□□□□ -0.91
HERC1-214ENST00000561400 CD300EQ496F6 205 aaPredicted RBP9.36□□□□□ -0.91
HERC1-214ENST00000561400 RPL39P5Q59GN2 51 aa9.36□□□□□ -0.91
HERC1-214ENST00000561400 MINOS1Q5TGZ0 78 aa9.36□□□□□ -0.91
HERC1-214ENST00000561400 TCTEX1D1Q8N7M0 179 aa9.36□□□□□ -0.91
HERC1-214ENST00000561400 TMEM170AQ8WVE7 144 aa9.36□□□□□ -0.91
HERC1-214ENST00000561400 CCL28Q9NRJ3 127 aa9.36□□□□□ -0.91
HERC1-214ENST00000561400 MRPL16Q9NX20 251 aaKnown RBP9.36□□□□□ -0.91
HERC1-214ENST00000561400 MINOS1-NBL1R4GNA1 71 aa9.36□□□□□ -0.91
HERC1-214ENST00000561400 PET100P0DJ07 73 aa9.36□□□□□ -0.91
HERC1-214ENST00000561400 SRP14P37108 136 aaKnown RBP9.36□□□□□ -0.91
HERC1-214ENST00000561400 C9orf139Q6ZV77 190 aa9.36□□□□□ -0.91
HERC1-214ENST00000561400 TEX29Q8N6K0 151 aa9.36□□□□□ -0.91
HERC1-214ENST00000561400 ERG28Q9UKR5 140 aa9.36□□□□□ -0.91
HERC1-214ENST00000561400 AMMECR1Q9Y4X0 333 aaPredicted RBP9.36□□□□□ -0.91
HERC1-214ENST00000561400 MDFIC2A0A1B0GVS7 189 aa9.35□□□□□ -0.91
HERC1-214ENST00000561400 F2RP25116 425 aa9.35□□□□□ -0.91
HERC1-214ENST00000561400 TSPOP30536 169 aa9.35□□□□□ -0.91
HERC1-214ENST00000561400 LINC00205P59089 165 aa9.35□□□□□ -0.91
HERC1-214ENST00000561400 TMEM41BQ5BJD5 291 aa9.35□□□□□ -0.91
HERC1-214ENST00000561400 SPATA31B1PQ5VZV4 182 aa9.35□□□□□ -0.91
HERC1-214ENST00000561400 ZNF833PQ6ZTB9 187 aa9.35□□□□□ -0.91
HERC1-214ENST00000561400 DRAM1Q8N682 238 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms