RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 TMEM231Q9H6L2 316 aa12.69□□□□□ -0.38
CDC42BPB-208ENST00000561271 SHPKQ9UHJ6 478 aa12.69□□□□□ -0.38
CDC42BPB-208ENST00000561271 IGLC1P0CG04 106 aa12.68□□□□□ -0.38
CDC42BPB-208ENST00000561271 ANXA3P12429 323 aa12.68□□□□□ -0.38
CDC42BPB-208ENST00000561271 NPPCP23582 126 aa12.68□□□□□ -0.38
CDC42BPB-208ENST00000561271 S100A5P33763 92 aa12.68□□□□□ -0.38
CDC42BPB-208ENST00000561271 CCR6P51684 374 aa12.68□□□□□ -0.38
CDC42BPB-208ENST00000561271 PAFAH1B2P68402 229 aa12.68□□□□□ -0.38
CDC42BPB-208ENST00000561271 EWSR1Q01844 656 aaKnown RBP eCLIP12.68□□□□□ -0.38
CDC42BPB-208ENST00000561271 TNFRSF9Q07011 255 aa12.68□□□□□ -0.38
CDC42BPB-208ENST00000561271 SMCO1Q147U7 214 aa12.68□□□□□ -0.38
CDC42BPB-208ENST00000561271 LYG2Q86SG7 212 aa12.68□□□□□ -0.38
CDC42BPB-208ENST00000561271 LGI3Q8N145 548 aa12.68□□□□□ -0.38
CDC42BPB-208ENST00000561271 RNASEH2CQ8TDP1 164 aaKnown RBP12.68□□□□□ -0.38
CDC42BPB-208ENST00000561271 PLECQ15149 4684 aaKnown RBP12.68□□□□□ -0.38
CDC42BPB-208ENST00000561271 TRAV30A0A087WSZ9 112 aa12.67□□□□□ -0.38
CDC42BPB-208ENST00000561271 DNASE2O00115 360 aaPredicted RBP12.67□□□□□ -0.38
CDC42BPB-208ENST00000561271 CD5P06127 495 aa12.67□□□□□ -0.38
CDC42BPB-208ENST00000561271 SLC25A4P12235 298 aa12.67□□□□□ -0.38
CDC42BPB-208ENST00000561271 OR10J1P30954 320 aa12.67□□□□□ -0.38
CDC42BPB-208ENST00000561271 P2RY1P47900 373 aa12.67□□□□□ -0.38
CDC42BPB-208ENST00000561271 AP3S2P59780 193 aa12.67□□□□□ -0.38
CDC42BPB-208ENST00000561271 SRPXP78539 464 aa12.67□□□□□ -0.38
CDC42BPB-208ENST00000561271 PMS2P11Q13670 270 aa12.67□□□□□ -0.38
CDC42BPB-208ENST00000561271 LEMD1Q68G75 181 aa12.67□□□□□ -0.38
CDC42BPB-208ENST00000561271 STXBP6Q8NFX7 210 aa12.67□□□□□ -0.38
CDC42BPB-208ENST00000561271 OR1S2Q8NGQ3 325 aa12.67□□□□□ -0.38
CDC42BPB-208ENST00000561271 RNF183Q96D59 192 aa12.67□□□□□ -0.38
CDC42BPB-208ENST00000561271 ACY3Q96HD9 319 aa12.67□□□□□ -0.38
CDC42BPB-208ENST00000561271 RBKSQ9H477 322 aa12.67□□□□□ -0.38
CDC42BPB-208ENST00000561271 HSPB7Q9UBY9 170 aa12.67□□□□□ -0.38
CDC42BPB-208ENST00000561271 RABAC1Q9UI14 185 aa12.67□□□□□ -0.38
CDC42BPB-208ENST00000561271 A0A1W2PS18 150 aa12.66□□□□□ -0.38
CDC42BPB-208ENST00000561271 IFNA10P01566 189 aa12.66□□□□□ -0.38
CDC42BPB-208ENST00000561271 CRYBB3P26998 211 aa12.66□□□□□ -0.38
CDC42BPB-208ENST00000561271 CMC4P56277 68 aaPredicted RBP12.66□□□□□ -0.38
CDC42BPB-208ENST00000561271 DEFB131AP59861 70 aa12.66□□□□□ -0.38
CDC42BPB-208ENST00000561271 RBMS2Q15434 407 aaKnown RBP12.66□□□□□ -0.38
CDC42BPB-208ENST00000561271 CCDC190Q86UF4 302 aa12.66□□□□□ -0.38
CDC42BPB-208ENST00000561271 OR1S1Q8NH92 325 aa12.66□□□□□ -0.38
CDC42BPB-208ENST00000561271 DTD1Q8TEA8 209 aa12.66□□□□□ -0.38
CDC42BPB-208ENST00000561271 VAMP1P23763 118 aa12.65□□□□□ -0.38
CDC42BPB-208ENST00000561271 CACFD1Q9UGQ2 172 aa12.65□□□□□ -0.38
CDC42BPB-208ENST00000561271 TRAV2A0A0B4J234 112 aa12.64□□□□□ -0.39
CDC42BPB-208ENST00000561271 CXorf65A6NEN9 183 aa12.64□□□□□ -0.39
CDC42BPB-208ENST00000561271 MPTX1A8MV57 137 aa12.64□□□□□ -0.39
CDC42BPB-208ENST00000561271 JTBO76095 146 aa12.64□□□□□ -0.39
CDC42BPB-208ENST00000561271 USF2Q15853 346 aaPredicted RBP12.64□□□□□ -0.39
CDC42BPB-208ENST00000561271 TMEM128Q5BJH2 165 aa12.64□□□□□ -0.39
CDC42BPB-208ENST00000561271 ETFRF1Q6IPR1 90 aa12.64□□□□□ -0.39
CDC42BPB-208ENST00000561271 NPIPB3Q92617 1050 aa12.64□□□□□ -0.39
CDC42BPB-208ENST00000561271 NARS2Q96I59 477 aaKnown RBP12.64□□□□□ -0.39
CDC42BPB-208ENST00000561271 CSTL1Q9H114 145 aa12.64□□□□□ -0.39
CDC42BPB-208ENST00000561271 K7EQG2 157 aa12.63□□□□□ -0.39
CDC42BPB-208ENST00000561271 IL4P05112 153 aa12.63□□□□□ -0.39
CDC42BPB-208ENST00000561271 HNRNPCP07910 306 aaKnown RBP eCLIP12.63□□□□□ -0.39
CDC42BPB-208ENST00000561271 YPEL3P61236 119 aaPredicted RBP12.63□□□□□ -0.39
CDC42BPB-208ENST00000561271 NOXA1Q86UR1 476 aa12.63□□□□□ -0.39
CDC42BPB-208ENST00000561271 Q8WTZ3 238 aa12.63□□□□□ -0.39
CDC42BPB-208ENST00000561271 GRAMD2BQ96HH9 432 aa12.63□□□□□ -0.39
CDC42BPB-208ENST00000561271 SRRQ9GZT4 340 aa12.63□□□□□ -0.39
CDC42BPB-208ENST00000561271 U3KQE9 123 aa12.63□□□□□ -0.39
CDC42BPB-208ENST00000561271 DUXBA0A1W2PPF3 345 aa12.62□□□□□ -0.39
CDC42BPB-208ENST00000561271 CA1P00915 261 aaPredicted RBP12.62□□□□□ -0.39
CDC42BPB-208ENST00000561271 ZNF688P0C7X2 276 aa12.62□□□□□ -0.39
CDC42BPB-208ENST00000561271 PPP1R1AQ13522 171 aa12.62□□□□□ -0.39
CDC42BPB-208ENST00000561271 SPANXN2Q5MJ10 180 aa12.62□□□□□ -0.39
CDC42BPB-208ENST00000561271 GLMPQ8WWB7 406 aa12.62□□□□□ -0.39
CDC42BPB-208ENST00000561271 U3KQ87 197 aa12.62□□□□□ -0.39
CDC42BPB-208ENST00000561271 ZNF701M0R085 212 aaPredicted RBP12.61□□□□□ -0.39
CDC42BPB-208ENST00000561271 PITX3O75364 302 aa12.61□□□□□ -0.39
CDC42BPB-208ENST00000561271 TOMM40O96008 361 aa12.61□□□□□ -0.39
CDC42BPB-208ENST00000561271 IFNA4P05014 189 aa12.61□□□□□ -0.39
CDC42BPB-208ENST00000561271 IAPPP10997 89 aa12.61□□□□□ -0.39
CDC42BPB-208ENST00000561271 CENPSQ8N2Z9 138 aa12.61□□□□□ -0.39
CDC42BPB-208ENST00000561271 DCANP1Q8TF63 244 aa12.61□□□□□ -0.39
CDC42BPB-208ENST00000561271 SLC25A21Q9BQT8 299 aaPredicted RBP12.61□□□□□ -0.39
CDC42BPB-208ENST00000561271 PIGBOS1A0A0B4J2F0 54 aa12.6□□□□□ -0.39
CDC42BPB-208ENST00000561271 SFT2D2O95562 160 aa12.6□□□□□ -0.39
CDC42BPB-208ENST00000561271 PSG1P11464 419 aa12.6□□□□□ -0.39
CDC42BPB-208ENST00000561271 C16orf54Q6UWD8 224 aa12.6□□□□□ -0.39
CDC42BPB-208ENST00000561271 STHQ8IWL8 128 aa12.6□□□□□ -0.39
CDC42BPB-208ENST00000561271 LRTM2Q8N967 370 aa12.6□□□□□ -0.39
CDC42BPB-208ENST00000561271 GATAD1Q8WUU5 269 aa12.6□□□□□ -0.39
CDC42BPB-208ENST00000561271 DEDD2Q8WXF8 326 aa12.6□□□□□ -0.39
CDC42BPB-208ENST00000561271 NUPR2A6NF83 97 aa12.59□□□□□ -0.39
CDC42BPB-208ENST00000561271 HELTA6NFD8 242 aa12.59□□□□□ -0.39
CDC42BPB-208ENST00000561271 KNCNA6PVL3 124 aa12.59□□□□□ -0.39
CDC42BPB-208ENST00000561271 RD3LP0DJH9 198 aa12.59□□□□□ -0.39
CDC42BPB-208ENST00000561271 EIF2B2P49770 351 aaKnown RBP12.59□□□□□ -0.39
CDC42BPB-208ENST00000561271 DHRS2Q13268 280 aa12.59□□□□□ -0.39
CDC42BPB-208ENST00000561271 OR51G1Q8NGK1 321 aa12.59□□□□□ -0.39
CDC42BPB-208ENST00000561271 OR11H2Q8NH07 326 aa12.59□□□□□ -0.39
CDC42BPB-208ENST00000561271 RNF125Q96EQ8 232 aa12.59□□□□□ -0.39
CDC42BPB-208ENST00000561271 SLC35E1Q96K37 410 aa12.59□□□□□ -0.39
CDC42BPB-208ENST00000561271 RARRES2Q99969 163 aa12.59□□□□□ -0.39
CDC42BPB-208ENST00000561271 IGKV1D-37A0A075B6S9 117 aa12.58□□□□□ -0.4
CDC42BPB-208ENST00000561271 ZFP92A6NM28 416 aa12.58□□□□□ -0.4
CDC42BPB-208ENST00000561271 HOXB5P09067 269 aa12.58□□□□□ -0.4
CDC42BPB-208ENST00000561271 INPP1P49441 399 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms