RNA–Protein interactions for RNA: ENST00000560986.1

HMG20A-212, Transcript of high mobility group 20A, humanhuman

TSL 2

Gene HMG20A, Length 747 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-212ENST00000560986 TREM1Q9NP99 234 aa4.52□□□□□ -1.69
HMG20A-212ENST00000560986 SLC39A9Q9NUM3 307 aa4.52□□□□□ -1.69
HMG20A-212ENST00000560986 ONECUT1Q9UBC0 465 aa4.52□□□□□ -1.69
HMG20A-212ENST00000560986 VAX2Q9UIW0 290 aa4.52□□□□□ -1.69
HMG20A-212ENST00000560986 HIVEP3Q5T1R4 2406 aa4.52□□□□□ -1.69
HMG20A-212ENST00000560986 PCNX1Q96RV3 2341 aa4.51□□□□□ -1.69
HMG20A-212ENST00000560986 KIAA2026Q5HYC2 2103 aa4.51□□□□□ -1.69
HMG20A-212ENST00000560986 A0A1W2PPE3 182 aa4.51□□□□□ -1.69
HMG20A-212ENST00000560986 A0A1W2PPV4 95 aa4.51□□□□□ -1.69
HMG20A-212ENST00000560986 MAP1LC3B2A6NCE7 125 aa4.51□□□□□ -1.69
HMG20A-212ENST00000560986 B4DSR2 109 aa4.51□□□□□ -1.69
HMG20A-212ENST00000560986 LYNX1G3V0Z9 82 aa4.51□□□□□ -1.69
HMG20A-212ENST00000560986 M0QZK8 103 aa4.51□□□□□ -1.69
HMG20A-212ENST00000560986 PDE6DO43924 150 aa4.51□□□□□ -1.69
HMG20A-212ENST00000560986 CLN5O75503 358 aa4.51□□□□□ -1.69
HMG20A-212ENST00000560986 CXorf1O96002 111 aa4.51□□□□□ -1.69
HMG20A-212ENST00000560986 CA2P00918 260 aa4.51□□□□□ -1.69
HMG20A-212ENST00000560986 IGHV4-39P01824 125 aa4.51□□□□□ -1.69
HMG20A-212ENST00000560986 CRYGCP07315 174 aa4.51□□□□□ -1.69
HMG20A-212ENST00000560986 LYNX1P0DP58 116 aa4.51□□□□□ -1.69
HMG20A-212ENST00000560986 BCL2P10415 239 aa4.51□□□□□ -1.69
HMG20A-212ENST00000560986 FCGR2BP31994 310 aaPredicted RBP4.51□□□□□ -1.69
HMG20A-212ENST00000560986 CDKN1AP38936 164 aa4.51□□□□□ -1.69
HMG20A-212ENST00000560986 CDC34P49427 236 aaPredicted RBP4.51□□□□□ -1.69
HMG20A-212ENST00000560986 FHITP49789 147 aa4.51□□□□□ -1.69
HMG20A-212ENST00000560986 RUNX1Q01196 453 aa4.51□□□□□ -1.69
HMG20A-212ENST00000560986 PAX8Q06710 450 aa4.51□□□□□ -1.69
HMG20A-212ENST00000560986 HNF4GQ14541 408 aa4.51□□□□□ -1.69
HMG20A-212ENST00000560986 HCP5Q6MZN7 132 aa4.51□□□□□ -1.69
HMG20A-212ENST00000560986 PQLC2Q6ZP29 291 aa4.51□□□□□ -1.69
HMG20A-212ENST00000560986 Q6ZSV7 163 aa4.51□□□□□ -1.69
HMG20A-212ENST00000560986 C16orf82Q7Z2V1 217 aa4.51□□□□□ -1.69
HMG20A-212ENST00000560986 VMO1Q7Z5L0 202 aa4.51□□□□□ -1.69
HMG20A-212ENST00000560986 SLC35E3Q7Z769 313 aa4.51□□□□□ -1.69
HMG20A-212ENST00000560986 VKORC1L1Q8N0U8 176 aa4.51□□□□□ -1.69
HMG20A-212ENST00000560986 RPP25LQ8N5L8 163 aaKnown RBP4.51□□□□□ -1.69
HMG20A-212ENST00000560986 Q8N6K4 173 aa4.51□□□□□ -1.69
HMG20A-212ENST00000560986 NRACQ8N912 160 aa4.51□□□□□ -1.69
HMG20A-212ENST00000560986 THAP8Q8NA92 274 aa4.51□□□□□ -1.69
HMG20A-212ENST00000560986 OR10G9Q8NGN4 311 aa4.51□□□□□ -1.69
HMG20A-212ENST00000560986 OR10G7Q8NGN6 311 aa4.51□□□□□ -1.69
HMG20A-212ENST00000560986 OR1L4Q8NGR5 311 aa4.51□□□□□ -1.69
HMG20A-212ENST00000560986 CLDND2Q8NHS1 167 aa4.51□□□□□ -1.69
HMG20A-212ENST00000560986 SFT2D1Q8WV19 159 aa4.51□□□□□ -1.69
HMG20A-212ENST00000560986 URB1-AS1Q96HZ7 61 aa4.51□□□□□ -1.69
HMG20A-212ENST00000560986 NARS2Q96I59 477 aaKnown RBP4.51□□□□□ -1.69
HMG20A-212ENST00000560986 LINC00052Q96N35 136 aa4.51□□□□□ -1.69
HMG20A-212ENST00000560986 SCRT1Q9BWW7 348 aa4.51□□□□□ -1.69
HMG20A-212ENST00000560986 GGTLC1Q9BX51 225 aa4.51□□□□□ -1.69
HMG20A-212ENST00000560986 BPESC1Q9GZL8 116 aa4.51□□□□□ -1.69
HMG20A-212ENST00000560986 MAP1LC3BQ9GZQ8 125 aa4.51□□□□□ -1.69
HMG20A-212ENST00000560986 EIF5A2Q9GZV4 153 aaKnown RBP4.51□□□□□ -1.69
HMG20A-212ENST00000560986 TMEM167BQ9NRX6 74 aa4.51□□□□□ -1.69
HMG20A-212ENST00000560986 TMEM242Q9NWH2 141 aa4.51□□□□□ -1.69
HMG20A-212ENST00000560986 THYN1Q9P016 225 aa4.51□□□□□ -1.69
HMG20A-212ENST00000560986 ZNF580Q9UK33 172 aa4.51□□□□□ -1.69
HMG20A-212ENST00000560986 ATRXP46100 2492 aa4.51□□□□□ -1.69
HMG20A-212ENST00000560986 TRAV30A0A087WSZ9 112 aa4.5□□□□□ -1.69
HMG20A-212ENST00000560986 A0A087WWC5 75 aa4.5□□□□□ -1.69
HMG20A-212ENST00000560986 TRAV3A0A0B4J244 114 aa4.5□□□□□ -1.69
HMG20A-212ENST00000560986 IGLC7A0M8Q6 106 aa4.5□□□□□ -1.69
HMG20A-212ENST00000560986 DNAJC9-AS1A6NH13 148 aa4.5□□□□□ -1.69
HMG20A-212ENST00000560986 KRTAP29-1A8MX34 341 aaPredicted RBP4.5□□□□□ -1.69
HMG20A-212ENST00000560986 F6UZH7 168 aa4.5□□□□□ -1.69
HMG20A-212ENST00000560986 TIMM23O14925 209 aa4.5□□□□□ -1.69
HMG20A-212ENST00000560986 AGPAT2O15120 278 aa4.5□□□□□ -1.69
HMG20A-212ENST00000560986 KALRNO60229 2985 aa4.5□□□□□ -1.69
HMG20A-212ENST00000560986 IGHV3-7P01780 117 aa4.5□□□□□ -1.69
HMG20A-212ENST00000560986 HLA-DRB1P01911 266 aa4.5□□□□□ -1.69
HMG20A-212ENST00000560986 APOC3P02656 99 aa4.5□□□□□ -1.69
HMG20A-212ENST00000560986 SFTA3P0C7M3 94 aa4.5□□□□□ -1.69
HMG20A-212ENST00000560986 STAG3L2P0CL84 134 aa4.5□□□□□ -1.69
HMG20A-212ENST00000560986 STAG3L3P0CL85 134 aa4.5□□□□□ -1.69
HMG20A-212ENST00000560986 HIST1H1BP16401 226 aaKnown RBP4.5□□□□□ -1.69
HMG20A-212ENST00000560986 CRIP2P52943 208 aaPredicted RBP4.5□□□□□ -1.69
HMG20A-212ENST00000560986 ATP5J2P56134 94 aa4.5□□□□□ -1.69
HMG20A-212ENST00000560986 LINC00205P59089 165 aa4.5□□□□□ -1.69
HMG20A-212ENST00000560986 PLP1P60201 277 aa4.5□□□□□ -1.69
HMG20A-212ENST00000560986 B2MP61769 119 aa4.5□□□□□ -1.69
HMG20A-212ENST00000560986 ARF6P62330 175 aa4.5□□□□□ -1.69
HMG20A-212ENST00000560986 MEF2BQ02080 365 aaPredicted RBP4.5□□□□□ -1.69
HMG20A-212ENST00000560986 AKR1C1Q04828 323 aa4.5□□□□□ -1.69
HMG20A-212ENST00000560986 MMDQ15546 238 aa4.5□□□□□ -1.69
HMG20A-212ENST00000560986 C5orf64Q2M2E5 130 aa4.5□□□□□ -1.69
HMG20A-212ENST00000560986 SOHLH1Q5JUK2 328 aa4.5□□□□□ -1.69
HMG20A-212ENST00000560986 FFAR4Q5NUL3 377 aa4.5□□□□□ -1.69
HMG20A-212ENST00000560986 UTF1Q5T230 341 aa4.5□□□□□ -1.69
HMG20A-212ENST00000560986 SLC16A13Q7RTY0 426 aa4.5□□□□□ -1.69
HMG20A-212ENST00000560986 MOB3BQ86TA1 216 aa4.5□□□□□ -1.69
HMG20A-212ENST00000560986 RPUSD4Q96CM3 377 aaKnown RBP4.5□□□□□ -1.69
HMG20A-212ENST00000560986 BTF3L4Q96K17 158 aa4.5□□□□□ -1.69
HMG20A-212ENST00000560986 TRGV9Q99603 122 aa4.5□□□□□ -1.69
HMG20A-212ENST00000560986 TXN2Q99757 166 aa4.5□□□□□ -1.69
HMG20A-212ENST00000560986 NIPSNAP3BQ9BS92 247 aa4.5□□□□□ -1.69
HMG20A-212ENST00000560986 RSG1Q9BU20 258 aa4.5□□□□□ -1.69
HMG20A-212ENST00000560986 METTL1Q9UBP6 276 aaKnown RBP4.5□□□□□ -1.69
HMG20A-212ENST00000560986 PITPNC1Q9UKF7 332 aa4.5□□□□□ -1.69
HMG20A-212ENST00000560986 F11RQ9Y624 299 aaKnown RBP4.5□□□□□ -1.69
HMG20A-212ENST00000560986 PXMP4Q9Y6I8 212 aa4.5□□□□□ -1.69
HMG20A-212ENST00000560986 TCRBV4S1A1TA0A5B7 111 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms