RNA–Protein interactions for RNA: ENST00000560801.5

TRPM1-212, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 1 (best)

Gene TRPM1, Length 4,454 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-212ENST00000560801 C9JCJ5 164 aa7.71□□□□□ -1.18
TRPM1-212ENST00000560801 H3BUA1 57 aa7.71□□□□□ -1.18
TRPM1-212ENST00000560801 CTRB1P17538 263 aa7.71□□□□□ -1.18
TRPM1-212ENST00000560801 RAB5CP51148 216 aa7.71□□□□□ -1.18
TRPM1-212ENST00000560801 PRR31Q5SQ13 230 aa7.71□□□□□ -1.18
TRPM1-212ENST00000560801 CTRB2Q6GPI1 263 aa7.71□□□□□ -1.18
TRPM1-212ENST00000560801 OR5AN1Q8NGI8 311 aa7.71□□□□□ -1.18
TRPM1-212ENST00000560801 SRSF8Q9BRL6 282 aaKnown RBP7.71□□□□□ -1.18
TRPM1-212ENST00000560801 ZNF581Q9P0T4 197 aa7.71□□□□□ -1.18
TRPM1-212ENST00000560801 A0A1B0GWJ7 208 aa7.71□□□□□ -1.18
TRPM1-212ENST00000560801 C8orf88P0DMB2 117 aa7.71□□□□□ -1.18
TRPM1-212ENST00000560801 MMP9P14780 707 aa7.71□□□□□ -1.18
TRPM1-212ENST00000560801 TMEM187Q14656 261 aa7.71□□□□□ -1.18
TRPM1-212ENST00000560801 ZNF833PQ6ZTB9 187 aa7.71□□□□□ -1.18
TRPM1-212ENST00000560801 TMEM252Q8N6L7 170 aa7.71□□□□□ -1.18
TRPM1-212ENST00000560801 C5orf17Q8NAS9 161 aa7.71□□□□□ -1.18
TRPM1-212ENST00000560801 PQLC2Q6ZP29 291 aa7.7□□□□□ -1.18
TRPM1-212ENST00000560801 C5orf24Q7Z6I8 188 aa7.7□□□□□ -1.18
TRPM1-212ENST00000560801 SLC50A1Q9BRV3 221 aa7.7□□□□□ -1.18
TRPM1-212ENST00000560801 ZNF727A8MUV8 499 aa7.7□□□□□ -1.18
TRPM1-212ENST00000560801 TMEM262E9PQX1 116 aa7.7□□□□□ -1.18
TRPM1-212ENST00000560801 LINC00205P59089 165 aa7.7□□□□□ -1.18
TRPM1-212ENST00000560801 SRSF1Q07955 248 aaKnown RBP eCLIP7.7□□□□□ -1.18
TRPM1-212ENST00000560801 OR51M1Q9H341 326 aa7.7□□□□□ -1.18
TRPM1-212ENST00000560801 MRPL27Q9P0M9 148 aaKnown RBP7.7□□□□□ -1.18
TRPM1-212ENST00000560801 TRGV4A0A0C4DH28 118 aa7.7□□□□□ -1.18
TRPM1-212ENST00000560801 LINC00473A8K010 186 aa7.7□□□□□ -1.18
TRPM1-212ENST00000560801 F8W036 122 aa7.7□□□□□ -1.18
TRPM1-212ENST00000560801 CA1P00915 261 aaPredicted RBP7.7□□□□□ -1.18
TRPM1-212ENST00000560801 GNG4P50150 75 aa7.7□□□□□ -1.18
TRPM1-212ENST00000560801 FBLN7Q53RD9 439 aa7.7□□□□□ -1.18
TRPM1-212ENST00000560801 TMUB2Q71RG4 321 aa7.7□□□□□ -1.18
TRPM1-212ENST00000560801 WFDC12Q8WWY7 111 aa7.7□□□□□ -1.18
TRPM1-212ENST00000560801 PHLDA3Q9Y5J5 127 aa7.7□□□□□ -1.18
TRPM1-212ENST00000560801 CHD9Q3L8U1 2897 aa7.7□□□□□ -1.18
TRPM1-212ENST00000560801 IGKV1D-8A0A087WSZ0 117 aa7.7□□□□□ -1.18
TRPM1-212ENST00000560801 SHISA3A0PJX4 238 aa7.7□□□□□ -1.18
TRPM1-212ENST00000560801 SLURP1P55000 103 aa7.7□□□□□ -1.18
TRPM1-212ENST00000560801 AMMECR1LQ6DCA0 310 aa7.7□□□□□ -1.18
TRPM1-212ENST00000560801 LAIR2Q6ISS4 152 aa7.7□□□□□ -1.18
TRPM1-212ENST00000560801 VN1R17PQ8TDU5 208 aa7.7□□□□□ -1.18
TRPM1-212ENST00000560801 SMIM8Q96KF7 97 aa7.7□□□□□ -1.18
TRPM1-212ENST00000560801 NDUFB8O95169 186 aa7.69□□□□□ -1.18
TRPM1-212ENST00000560801 CXorf1O96002 111 aa7.69□□□□□ -1.18
TRPM1-212ENST00000560801 IL6RP08887 468 aaPredicted RBP7.69□□□□□ -1.18
TRPM1-212ENST00000560801 ICAM4Q14773 271 aa7.69□□□□□ -1.18
TRPM1-212ENST00000560801 LINC01006Q8NI28 216 aa7.69□□□□□ -1.18
TRPM1-212ENST00000560801 LYRM2Q9NU23 88 aaPredicted RBP7.69□□□□□ -1.18
TRPM1-212ENST00000560801 CHD3Q12873 2000 aaKnown RBP7.69□□□□□ -1.18
TRPM1-212ENST00000560801 A6NDX4 124 aa7.69□□□□□ -1.18
TRPM1-212ENST00000560801 CD74P04233 296 aa7.69□□□□□ -1.18
TRPM1-212ENST00000560801 LEPP41159 167 aa7.69□□□□□ -1.18
TRPM1-212ENST00000560801 BTF3L4Q96K17 158 aa7.69□□□□□ -1.18
TRPM1-212ENST00000560801 TXN2Q99757 166 aa7.69□□□□□ -1.18
TRPM1-212ENST00000560801 UBE2L6O14933 153 aa7.69□□□□□ -1.18
TRPM1-212ENST00000560801 M6PRP20645 277 aa7.69□□□□□ -1.18
TRPM1-212ENST00000560801 ERVFC1-1P60608 527 aa7.69□□□□□ -1.18
TRPM1-212ENST00000560801 TOR2AQ5JU69 321 aa7.69□□□□□ -1.18
TRPM1-212ENST00000560801 SMIM7Q9BQ49 75 aa7.69□□□□□ -1.18
TRPM1-212ENST00000560801 TMEM160Q9NX00 188 aa7.69□□□□□ -1.18
TRPM1-212ENST00000560801 NDUFA6P56556 154 aa7.68□□□□□ -1.18
TRPM1-212ENST00000560801 EML6Q6ZMW3 1958 aa7.68□□□□□ -1.18
TRPM1-212ENST00000560801 I3L521 148 aa7.68□□□□□ -1.18
TRPM1-212ENST00000560801 SMAGPQ0VAQ4 97 aa7.68□□□□□ -1.18
TRPM1-212ENST00000560801 C8orf31Q8N9H6 132 aa7.68□□□□□ -1.18
TRPM1-212ENST00000560801 BOLA1Q9Y3E2 137 aa7.68□□□□□ -1.18
TRPM1-212ENST00000560801 SMLR1H3BR10 107 aa7.68□□□□□ -1.18
TRPM1-212ENST00000560801 FCN3O75636 299 aa7.68□□□□□ -1.18
TRPM1-212ENST00000560801 DEFB130BP0DP73 79 aa7.68□□□□□ -1.18
TRPM1-212ENST00000560801 DEFB130AP0DP74 79 aa7.68□□□□□ -1.18
TRPM1-212ENST00000560801 FOLR2P14207 255 aa7.68□□□□□ -1.18
TRPM1-212ENST00000560801 RAB5AP20339 215 aa7.68□□□□□ -1.18
TRPM1-212ENST00000560801 FGF8P55075 233 aaPredicted RBP7.68□□□□□ -1.18
TRPM1-212ENST00000560801 FAM74A4Q5TZK3 123 aa7.68□□□□□ -1.18
TRPM1-212ENST00000560801 ALX4Q9H161 411 aaPredicted RBP7.68□□□□□ -1.18
TRPM1-212ENST00000560801 FAM90A9PA6NNJ1 464 aa7.68□□□□□ -1.18
TRPM1-212ENST00000560801 C15orf65H3BRN8 121 aa7.68□□□□□ -1.18
TRPM1-212ENST00000560801 MT-ND4LP03901 98 aa7.68□□□□□ -1.18
TRPM1-212ENST00000560801 DAD1P61803 113 aa7.68□□□□□ -1.18
TRPM1-212ENST00000560801 GALNT14Q96FL9 552 aa7.68□□□□□ -1.18
TRPM1-212ENST00000560801 XCL2Q9UBD3 114 aa7.68□□□□□ -1.18
TRPM1-212ENST00000560801 ZNF256Q9Y2P7 627 aaPredicted RBP7.68□□□□□ -1.18
TRPM1-212ENST00000560801 IGSF23A1L1A6 192 aa7.67□□□□□ -1.18
TRPM1-212ENST00000560801 ZNF705GA8MUZ8 300 aaPredicted RBP7.67□□□□□ -1.18
TRPM1-212ENST00000560801 PSCAO43653 123 aa7.67□□□□□ -1.18
TRPM1-212ENST00000560801 FSTL3O95633 263 aa7.67□□□□□ -1.18
TRPM1-212ENST00000560801 IGLL1P15814 213 aa7.67□□□□□ -1.18
TRPM1-212ENST00000560801 TMEM144Q7Z5S9 345 aa7.67□□□□□ -1.18
TRPM1-212ENST00000560801 C5orf56Q8N8D9 126 aa7.67□□□□□ -1.18
TRPM1-212ENST00000560801 PIFOQ8TCI5 191 aa7.67□□□□□ -1.18
TRPM1-212ENST00000560801 PRR25Q96S07 402 aa7.67□□□□□ -1.18
TRPM1-212ENST00000560801 NKX6-2Q9C056 277 aaPredicted RBP7.67□□□□□ -1.18
TRPM1-212ENST00000560801 KLK5Q9Y337 293 aaPredicted RBP7.67□□□□□ -1.18
TRPM1-212ENST00000560801 MAST4O15021 2626 aa7.67□□□□□ -1.18
TRPM1-212ENST00000560801 TRAV3A0A0B4J244 114 aa7.67□□□□□ -1.18
TRPM1-212ENST00000560801 RNASE4P34096 147 aaKnown RBP7.67□□□□□ -1.18
TRPM1-212ENST00000560801 NKX2-5P52952 324 aaPredicted RBP7.67□□□□□ -1.18
TRPM1-212ENST00000560801 BAGE2Q86Y30 109 aa7.67□□□□□ -1.18
TRPM1-212ENST00000560801 GATCO43716 136 aaKnown RBP7.67□□□□□ -1.18
TRPM1-212ENST00000560801 INSP01308 110 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms