RNA–Protein interactions for RNA: ENST00000560163.1

RABGGTA-214, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-214ENST00000560163 TNFSF8P32971 234 aa14.02□□□□□ -0.17
RABGGTA-214ENST00000560163 CCDC190Q86UF4 302 aa14.02□□□□□ -0.17
RABGGTA-214ENST00000560163 FXYD6Q9H0Q3 95 aa14.02□□□□□ -0.17
RABGGTA-214ENST00000560163 DKK2Q9UBU2 259 aa14.02□□□□□ -0.17
RABGGTA-214ENST00000560163 TMEM189A5PLL7 270 aa14.01□□□□□ -0.17
RABGGTA-214ENST00000560163 HELTA6NFD8 242 aa14.01□□□□□ -0.17
RABGGTA-214ENST00000560163 INS-IGF2F8WCM5 200 aa14.01□□□□□ -0.17
RABGGTA-214ENST00000560163 ELK1P19419 428 aa14.01□□□□□ -0.17
RABGGTA-214ENST00000560163 DHRS2Q13268 280 aa14.01□□□□□ -0.17
RABGGTA-214ENST00000560163 H2BFWTQ7Z2G1 175 aa14.01□□□□□ -0.17
RABGGTA-214ENST00000560163 S100ZQ8WXG8 99 aa14.01□□□□□ -0.17
RABGGTA-214ENST00000560163 RABL2AQ9UBK7 228 aaPredicted RBP14.01□□□□□ -0.17
RABGGTA-214ENST00000560163 ANAPC10Q9UM13 185 aa14.01□□□□□ -0.17
RABGGTA-214ENST00000560163 RABL2BQ9UNT1 228 aa14.01□□□□□ -0.17
RABGGTA-214ENST00000560163 SMIM9A6NGZ8 99 aa14□□□□□ -0.17
RABGGTA-214ENST00000560163 CLN5O75503 358 aa14□□□□□ -0.17
RABGGTA-214ENST00000560163 GLMPQ8WWB7 406 aa14□□□□□ -0.17
RABGGTA-214ENST00000560163 SOSTQ9BQB4 213 aa14□□□□□ -0.17
RABGGTA-214ENST00000560163 FNDC4Q9H6D8 234 aaPredicted RBP14□□□□□ -0.17
RABGGTA-214ENST00000560163 SCRT2Q9NQ03 307 aa14□□□□□ -0.17
RABGGTA-214ENST00000560163 IGKV1-17P01599 117 aa13.99□□□□□ -0.17
RABGGTA-214ENST00000560163 EMP1P54849 157 aa13.99□□□□□ -0.17
RABGGTA-214ENST00000560163 FAM3BP58499 235 aaPredicted RBP13.99□□□□□ -0.17
RABGGTA-214ENST00000560163 OXA1LQ15070 435 aa13.99□□□□□ -0.17
RABGGTA-214ENST00000560163 MLANAQ16655 118 aa13.99□□□□□ -0.17
RABGGTA-214ENST00000560163 SPINK9Q5DT21 86 aa13.99□□□□□ -0.17
RABGGTA-214ENST00000560163 SPANXN2Q5MJ10 180 aa13.99□□□□□ -0.17
RABGGTA-214ENST00000560163 C16orf54Q6UWD8 224 aa13.99□□□□□ -0.17
RABGGTA-214ENST00000560163 OR4X1Q8NH49 305 aa13.99□□□□□ -0.17
RABGGTA-214ENST00000560163 S100A16Q96FQ6 103 aaKnown RBP13.99□□□□□ -0.17
RABGGTA-214ENST00000560163 DIRAS2Q96HU8 199 aa13.99□□□□□ -0.17
RABGGTA-214ENST00000560163 NIPSNAP3BQ9BS92 247 aa13.99□□□□□ -0.17
RABGGTA-214ENST00000560163 SEPSECSQ9HD40 501 aaKnown RBP13.99□□□□□ -0.17
RABGGTA-214ENST00000560163 DIABLOQ9NR28 239 aa13.99□□□□□ -0.17
RABGGTA-214ENST00000560163 FAM90A26D6RGX4 464 aa13.98□□□□□ -0.17
RABGGTA-214ENST00000560163 PMP2P02689 132 aa13.98□□□□□ -0.17
RABGGTA-214ENST00000560163 NAT1P18440 290 aa13.98□□□□□ -0.17
RABGGTA-214ENST00000560163 SNCAP37840 140 aa13.98□□□□□ -0.17
RABGGTA-214ENST00000560163 FAM222AQ5U5X8 452 aa13.98□□□□□ -0.17
RABGGTA-214ENST00000560163 TMEM230Q96A57 120 aa13.98□□□□□ -0.17
RABGGTA-214ENST00000560163 V9GYH0 126 aa13.98□□□□□ -0.17
RABGGTA-214ENST00000560163 FAM25AB3EWG3 89 aa13.97□□□□□ -0.17
RABGGTA-214ENST00000560163 FAM25CB3EWG5 89 aa13.97□□□□□ -0.17
RABGGTA-214ENST00000560163 FAM25GB3EWG6 89 aa13.97□□□□□ -0.17
RABGGTA-214ENST00000560163 RNASE2P10153 161 aaKnown RBP13.97□□□□□ -0.17
RABGGTA-214ENST00000560163 EIF2B2P49770 351 aaKnown RBP13.97□□□□□ -0.17
RABGGTA-214ENST00000560163 AP2S1P53680 142 aaPredicted RBP13.97□□□□□ -0.17
RABGGTA-214ENST00000560163 IZUMO4Q1ZYL8 232 aa13.97□□□□□ -0.17
RABGGTA-214ENST00000560163 PHLDA2Q53GA4 152 aa13.97□□□□□ -0.17
RABGGTA-214ENST00000560163 MRGPRFQ96AM1 343 aa13.97□□□□□ -0.17
RABGGTA-214ENST00000560163 NARS2Q96I59 477 aaKnown RBP13.97□□□□□ -0.17
RABGGTA-214ENST00000560163 WDR12Q9GZL7 423 aaKnown RBP13.97□□□□□ -0.17
RABGGTA-214ENST00000560163 IFT46Q9NQC8 304 aa13.97□□□□□ -0.17
RABGGTA-214ENST00000560163 EXTL2Q9UBQ6 330 aa13.97□□□□□ -0.17
RABGGTA-214ENST00000560163 RFNGQ9Y644 331 aa13.97□□□□□ -0.17
RABGGTA-214ENST00000560163 TEX48A0A1B0GUV7 120 aa13.96□□□□□ -0.17
RABGGTA-214ENST00000560163 CORTO00230 105 aa13.96□□□□□ -0.17
RABGGTA-214ENST00000560163 HLA-DRB4P13762 266 aa13.96□□□□□ -0.17
RABGGTA-214ENST00000560163 TMEM88Q6PEY1 159 aa13.96□□□□□ -0.17
RABGGTA-214ENST00000560163 TBC1D26Q86UD7 250 aa13.96□□□□□ -0.17
RABGGTA-214ENST00000560163 LYSMD2Q8IV50 215 aa13.96□□□□□ -0.17
RABGGTA-214ENST00000560163 OR6F1Q8NGZ6 308 aa13.96□□□□□ -0.17
RABGGTA-214ENST00000560163 C15orf40Q8WUR7 153 aa13.96□□□□□ -0.17
RABGGTA-214ENST00000560163 HLA-DRB4X5D2U9 266 aa13.96□□□□□ -0.17
RABGGTA-214ENST00000560163 A0A0B4J293 547 aa13.95□□□□□ -0.18
RABGGTA-214ENST00000560163 P0C879 139 aa13.95□□□□□ -0.18
RABGGTA-214ENST00000560163 SNRPD3P62318 126 aaKnown RBP13.95□□□□□ -0.18
RABGGTA-214ENST00000560163 ZNF846Q147U1 533 aa13.95□□□□□ -0.18
RABGGTA-214ENST00000560163 TIGITQ495A1 244 aa13.95□□□□□ -0.18
RABGGTA-214ENST00000560163 C6orf223Q8N319 242 aa13.95□□□□□ -0.18
RABGGTA-214ENST00000560163 NBDYA0A0U1RRE5 68 aa13.94□□□□□ -0.18
RABGGTA-214ENST00000560163 FABP12A6NFH5 140 aa13.94□□□□□ -0.18
RABGGTA-214ENST00000560163 TAS2R46P59540 309 aa13.94□□□□□ -0.18
RABGGTA-214ENST00000560163 ZNF79Q15937 498 aa13.94□□□□□ -0.18
RABGGTA-214ENST00000560163 TMEM69Q5SWH9 247 aa13.94□□□□□ -0.18
RABGGTA-214ENST00000560163 GDF5OSQ5U4N7 250 aa13.94□□□□□ -0.18
RABGGTA-214ENST00000560163 OR5H2Q8NGV7 314 aa13.94□□□□□ -0.18
RABGGTA-214ENST00000560163 NRN1Q9NPD7 142 aa13.94□□□□□ -0.18
RABGGTA-214ENST00000560163 CTDSPLO15194 276 aa13.93□□□□□ -0.18
RABGGTA-214ENST00000560163 HNRNPCP07910 306 aaKnown RBP eCLIP13.93□□□□□ -0.18
RABGGTA-214ENST00000560163 HTN3P15516 51 aa13.93□□□□□ -0.18
RABGGTA-214ENST00000560163 SUB1P53999 127 aaKnown RBP eCLIP13.93□□□□□ -0.18
RABGGTA-214ENST00000560163 TAS2R20P59543 309 aa13.93□□□□□ -0.18
RABGGTA-214ENST00000560163 BSXQ3C1V8 233 aa13.93□□□□□ -0.18
RABGGTA-214ENST00000560163 LPCAT3Q6P1A2 487 aa13.93□□□□□ -0.18
RABGGTA-214ENST00000560163 ZNRF2Q8NHG8 242 aa13.93□□□□□ -0.18
RABGGTA-214ENST00000560163 DMBT1Q9UGM3 2413 aaPredicted RBP13.92□□□□□ -0.18
RABGGTA-214ENST00000560163 IGHV3OR16-12A0A075B7B8 117 aa13.92□□□□□ -0.18
RABGGTA-214ENST00000560163 TRAV30A0A087WSZ9 112 aa13.92□□□□□ -0.18
RABGGTA-214ENST00000560163 IGKV1-5P01602 117 aa13.92□□□□□ -0.18
RABGGTA-214ENST00000560163 OPRK1P41145 380 aa13.92□□□□□ -0.18
RABGGTA-214ENST00000560163 NKX2-1P43699 371 aaPredicted RBP13.92□□□□□ -0.18
RABGGTA-214ENST00000560163 MRPS10P82664 201 aaKnown RBP13.92□□□□□ -0.18
RABGGTA-214ENST00000560163 IL18Q14116 193 aa13.92□□□□□ -0.18
RABGGTA-214ENST00000560163 ZNF709Q8N972 641 aa13.92□□□□□ -0.18
RABGGTA-214ENST00000560163 CLUHP3Q96NS8 147 aa13.92□□□□□ -0.18
RABGGTA-214ENST00000560163 SRRQ9GZT4 340 aa13.92□□□□□ -0.18
RABGGTA-214ENST00000560163 TMED3Q9Y3Q3 217 aa13.92□□□□□ -0.18
RABGGTA-214ENST00000560163 BUB3O43684 328 aa13.91□□□□□ -0.18
RABGGTA-214ENST00000560163 IGLC1P0CG04 106 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms