RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 NPVFQ9HCQ7 196 aa7.22□□□□□ -1.25
HERC1-206ENST00000559996 C21orf62Q9NYP8 219 aa7.22□□□□□ -1.25
HERC1-206ENST00000559996 THYN1Q9P016 225 aa7.22□□□□□ -1.25
HERC1-206ENST00000559996 WDR83OSQ9Y284 106 aa7.22□□□□□ -1.25
HERC1-206ENST00000559996 ATRQ13535 2644 aa7.21□□□□□ -1.25
HERC1-206ENST00000559996 TRBV7-1A0A0A6YYK4 115 aa7.21□□□□□ -1.26
HERC1-206ENST00000559996 A0A0D9SG52 128 aa7.21□□□□□ -1.26
HERC1-206ENST00000559996 A0A0G2JLM5 398 aa7.21□□□□□ -1.26
HERC1-206ENST00000559996 BMPR1BO00238 502 aa7.21□□□□□ -1.26
HERC1-206ENST00000559996 RND2P52198 227 aa7.21□□□□□ -1.26
HERC1-206ENST00000559996 MFAP4P55083 255 aa7.21□□□□□ -1.26
HERC1-206ENST00000559996 CLINT1Q14677 625 aa7.21□□□□□ -1.26
HERC1-206ENST00000559996 RPL7L1Q6DKI1 246 aaKnown RBP7.21□□□□□ -1.26
HERC1-206ENST00000559996 ETFRF1Q6IPR1 90 aa7.21□□□□□ -1.26
HERC1-206ENST00000559996 CLEC19AQ6UXS0 136 aa7.21□□□□□ -1.26
HERC1-206ENST00000559996 STX12Q86Y82 276 aa7.21□□□□□ -1.26
HERC1-206ENST00000559996 OR4X2Q8NGF9 303 aa7.21□□□□□ -1.26
HERC1-206ENST00000559996 OR1S2Q8NGQ3 325 aa7.21□□□□□ -1.26
HERC1-206ENST00000559996 PPP1R14BQ96C90 147 aa7.21□□□□□ -1.26
HERC1-206ENST00000559996 MGST2Q99735 147 aa7.21□□□□□ -1.26
HERC1-206ENST00000559996 MDFIQ99750 246 aa7.21□□□□□ -1.26
HERC1-206ENST00000559996 ATP5SQ99766 215 aa7.21□□□□□ -1.26
HERC1-206ENST00000559996 TMEM147Q9BVK8 224 aa7.21□□□□□ -1.26
HERC1-206ENST00000559996 PARD6GQ9BYG4 376 aaPredicted RBP7.21□□□□□ -1.26
HERC1-206ENST00000559996 WDR61Q9GZS3 305 aaKnown RBP7.21□□□□□ -1.26
HERC1-206ENST00000559996 TENM1Q9UKZ4 2725 aa7.2□□□□□ -1.26
HERC1-206ENST00000559996 RPS10-NUDT3A0A1W2PQS6 291 aa7.2□□□□□ -1.26
HERC1-206ENST00000559996 TCRBV4S1A1TA0A5B7 111 aa7.2□□□□□ -1.26
HERC1-206ENST00000559996 OR2T8A6NH00 312 aa7.2□□□□□ -1.26
HERC1-206ENST00000559996 PPP5D1E7EU14 171 aa7.2□□□□□ -1.26
HERC1-206ENST00000559996 LGALS1P09382 135 aaKnown RBP7.2□□□□□ -1.26
HERC1-206ENST00000559996 LINC00869P0C866 280 aa7.2□□□□□ -1.26
HERC1-206ENST00000559996 HBG1P69891 147 aa7.2□□□□□ -1.26
HERC1-206ENST00000559996 HBG2P69892 147 aa7.2□□□□□ -1.26
HERC1-206ENST00000559996 ZNF90Q03938 601 aa7.2□□□□□ -1.26
HERC1-206ENST00000559996 OPCMLQ14982 345 aa7.2□□□□□ -1.26
HERC1-206ENST00000559996 TIGITQ495A1 244 aa7.2□□□□□ -1.26
HERC1-206ENST00000559996 ACSM6Q6P461 480 aa7.2□□□□□ -1.26
HERC1-206ENST00000559996 EEF1AKMT3Q96AZ1 226 aa7.2□□□□□ -1.26
HERC1-206ENST00000559996 OR5B12Q96R08 314 aa7.2□□□□□ -1.26
HERC1-206ENST00000559996 TRGV9Q99603 122 aa7.2□□□□□ -1.26
HERC1-206ENST00000559996 ARL6Q9H0F7 186 aa7.2□□□□□ -1.26
HERC1-206ENST00000559996 UQCC1Q9NVA1 299 aa7.2□□□□□ -1.26
HERC1-206ENST00000559996 SLC45A2Q9UMX9 530 aa7.2□□□□□ -1.26
HERC1-206ENST00000559996 TSSC4Q9Y5U2 329 aaPredicted RBP7.2□□□□□ -1.26
HERC1-206ENST00000559996 IGHV4OR15-8A0A075B7B6 117 aa7.19□□□□□ -1.26
HERC1-206ENST00000559996 A0A087WW49 117 aa7.19□□□□□ -1.26
HERC1-206ENST00000559996 ANKRD34BA5PLL1 514 aa7.19□□□□□ -1.26
HERC1-206ENST00000559996 TAAR5O14804 337 aa7.19□□□□□ -1.26
HERC1-206ENST00000559996 AGPAT2O15120 278 aa7.19□□□□□ -1.26
HERC1-206ENST00000559996 CYB5BO43169 146 aa7.19□□□□□ -1.26
HERC1-206ENST00000559996 TGOLN2O43493 480 aa7.19□□□□□ -1.26
HERC1-206ENST00000559996 BCL2L11O43521 198 aa7.19□□□□□ -1.26
HERC1-206ENST00000559996 SCAF4O95104 1147 aaKnown RBP7.19□□□□□ -1.26
HERC1-206ENST00000559996 GATA2P23769 480 aaPredicted RBP7.19□□□□□ -1.26
HERC1-206ENST00000559996 GPR183P32249 361 aa7.19□□□□□ -1.26
HERC1-206ENST00000559996 NUP62P37198 522 aaPredicted RBP7.19□□□□□ -1.26
HERC1-206ENST00000559996 NPBWR1P48145 328 aa7.19□□□□□ -1.26
HERC1-206ENST00000559996 TEPPQ6URK8 271 aa7.19□□□□□ -1.26
HERC1-206ENST00000559996 BTNL8Q6UX41 500 aa7.19□□□□□ -1.26
HERC1-206ENST00000559996 LILRB2Q8N423 598 aa7.19□□□□□ -1.26
HERC1-206ENST00000559996 UBAC2Q8NBM4 344 aa7.19□□□□□ -1.26
HERC1-206ENST00000559996 C4orf3Q8WVX3 66 aa7.19□□□□□ -1.26
HERC1-206ENST00000559996 TMEM158Q8WZ71 300 aa7.19□□□□□ -1.26
HERC1-206ENST00000559996 ACY3Q96HD9 319 aa7.19□□□□□ -1.26
HERC1-206ENST00000559996 RAX2Q96IS3 184 aa7.19□□□□□ -1.26
HERC1-206ENST00000559996 SLC35E1Q96K37 410 aa7.19□□□□□ -1.26
HERC1-206ENST00000559996 ARPC5LQ9BPX5 153 aa7.19□□□□□ -1.26
HERC1-206ENST00000559996 ZNF747Q9BV97 191 aa7.19□□□□□ -1.26
HERC1-206ENST00000559996 KRTAP9-2Q9BYQ4 174 aa7.19□□□□□ -1.26
HERC1-206ENST00000559996 ZC4H2Q9NQZ6 224 aa7.19□□□□□ -1.26
HERC1-206ENST00000559996 PEF1Q9UBV8 284 aaKnown RBP7.19□□□□□ -1.26
HERC1-206ENST00000559996 WI2-2373I1.2A0A1W2PRP0 233 aa7.18□□□□□ -1.26
HERC1-206ENST00000559996 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.18□□□□□ -1.26
HERC1-206ENST00000559996 DFFBO76075 338 aa7.18□□□□□ -1.26
HERC1-206ENST00000559996 OR2C1O95371 312 aa7.18□□□□□ -1.26
HERC1-206ENST00000559996 HSPB1P04792 205 aaKnown RBP7.18□□□□□ -1.26
HERC1-206ENST00000559996 OR10J1P30954 320 aa7.18□□□□□ -1.26
HERC1-206ENST00000559996 YPEL3P61236 119 aaPredicted RBP7.18□□□□□ -1.26
HERC1-206ENST00000559996 FHL3Q13643 280 aa7.18□□□□□ -1.26
HERC1-206ENST00000559996 DEFB136Q30KP8 78 aa7.18□□□□□ -1.26
HERC1-206ENST00000559996 Q56UQ5 140 aa7.18□□□□□ -1.26
HERC1-206ENST00000559996 PATE2Q6UY27 113 aa7.18□□□□□ -1.26
HERC1-206ENST00000559996 C8orf86Q6ZUL3 223 aa7.18□□□□□ -1.26
HERC1-206ENST00000559996 NDUFA11Q86Y39 141 aa7.18□□□□□ -1.26
HERC1-206ENST00000559996 STPG3Q8N7X2 389 aa7.18□□□□□ -1.26
HERC1-206ENST00000559996 DUX3Q96PT4 197 aa7.18□□□□□ -1.26
HERC1-206ENST00000559996 GINS3Q9BRX5 216 aa7.18□□□□□ -1.26
HERC1-206ENST00000559996 RSG1Q9BU20 258 aa7.18□□□□□ -1.26
HERC1-206ENST00000559996 GGTLC1Q9BX51 225 aa7.18□□□□□ -1.26
HERC1-206ENST00000559996 NPCDR1Q9BY65 106 aa7.18□□□□□ -1.26
HERC1-206ENST00000559996 TRAV30A0A087WSZ9 112 aa7.17□□□□□ -1.26
HERC1-206ENST00000559996 IGHV3-35A0A0C4DH35 117 aa7.17□□□□□ -1.26
HERC1-206ENST00000559996 UBE2L5PA0A1B0GUS4 154 aa7.17□□□□□ -1.26
HERC1-206ENST00000559996 SMCO3A2RU48 225 aa7.17□□□□□ -1.26
HERC1-206ENST00000559996 GNG7O60262 68 aa7.17□□□□□ -1.26
HERC1-206ENST00000559996 JTBO76095 146 aa7.17□□□□□ -1.26
HERC1-206ENST00000559996 YIF1AO95070 293 aa7.17□□□□□ -1.26
HERC1-206ENST00000559996 TOMM40O96008 361 aa7.17□□□□□ -1.26
HERC1-206ENST00000559996 CFDP00746 253 aaPredicted RBP7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms