RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 HIST1H2BKO60814 126 aa11.59□□□□□ -0.55
CSPG4P12-202ENST00000559989 HIST1H2BJP06899 126 aa11.59□□□□□ -0.55
CSPG4P12-202ENST00000559989 HIST1H2BOP23527 126 aa11.59□□□□□ -0.55
CSPG4P12-202ENST00000559989 HIST1H2BBP33778 126 aa11.59□□□□□ -0.55
CSPG4P12-202ENST00000559989 HIST1H2BDP58876 126 aa11.59□□□□□ -0.55
CSPG4P12-202ENST00000559989 HIST1H2BCP62807 126 aa11.59□□□□□ -0.55
CSPG4P12-202ENST00000559989 HIST2H2BEQ16778 126 aa11.59□□□□□ -0.55
CSPG4P12-202ENST00000559989 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.59□□□□□ -0.55
CSPG4P12-202ENST00000559989 FAM90A1Q86YD7 464 aa11.59□□□□□ -0.55
CSPG4P12-202ENST00000559989 HIST1H2BHQ93079 126 aa11.59□□□□□ -0.55
CSPG4P12-202ENST00000559989 HIST1H2BNQ99877 126 aa11.59□□□□□ -0.55
CSPG4P12-202ENST00000559989 HIST1H2BMQ99879 126 aa11.59□□□□□ -0.55
CSPG4P12-202ENST00000559989 D6R8Y8 96 aa11.59□□□□□ -0.55
CSPG4P12-202ENST00000559989 ATAD5Q96QE3 1844 aa11.59□□□□□ -0.55
CSPG4P12-202ENST00000559989 IL18BPO95998 194 aa11.59□□□□□ -0.55
CSPG4P12-202ENST00000559989 HAMPP81172 84 aa11.59□□□□□ -0.55
CSPG4P12-202ENST00000559989 SLC25A48Q6ZT89 311 aaKnown RBP11.59□□□□□ -0.55
CSPG4P12-202ENST00000559989 MPDZO75970 2070 aa11.59□□□□□ -0.55
CSPG4P12-202ENST00000559989 PAX8Q06710 450 aa11.59□□□□□ -0.55
CSPG4P12-202ENST00000559989 HIST1H2BLQ99880 126 aa11.59□□□□□ -0.55
CSPG4P12-202ENST00000559989 MYOFQ9NZM1 2061 aa11.59□□□□□ -0.55
CSPG4P12-202ENST00000559989 IGHV3-11P01762 117 aa11.59□□□□□ -0.55
CSPG4P12-202ENST00000559989 C1orf194Q5T5A4 169 aa11.59□□□□□ -0.55
CSPG4P12-202ENST00000559989 TM2D1Q9BX74 207 aa11.59□□□□□ -0.55
CSPG4P12-202ENST00000559989 IGHV3-73A0A0B4J1V6 119 aa11.58□□□□□ -0.56
CSPG4P12-202ENST00000559989 EREGO14944 169 aa11.58□□□□□ -0.56
CSPG4P12-202ENST00000559989 FAM219BQ5XKK7 198 aa11.58□□□□□ -0.56
CSPG4P12-202ENST00000559989 C8orf82Q6P1X6 216 aaPredicted RBP11.58□□□□□ -0.56
CSPG4P12-202ENST00000559989 SVIPQ8NHG7 77 aa11.58□□□□□ -0.56
CSPG4P12-202ENST00000559989 IGHG4P01861 327 aa11.58□□□□□ -0.56
CSPG4P12-202ENST00000559989 ZNF236Q9UL36 1845 aa11.58□□□□□ -0.56
CSPG4P12-202ENST00000559989 NSUN5P1Q3KNT7 163 aa11.58□□□□□ -0.56
CSPG4P12-202ENST00000559989 C7orf69Q9H7B7 122 aa11.58□□□□□ -0.56
CSPG4P12-202ENST00000559989 C3orf36Q3SXR2 165 aa11.58□□□□□ -0.56
CSPG4P12-202ENST00000559989 ZNF525Q8N782 197 aa11.58□□□□□ -0.56
CSPG4P12-202ENST00000559989 NAA38Q9BRA0 125 aaKnown RBP11.58□□□□□ -0.56
CSPG4P12-202ENST00000559989 SLC25A39Q9BZJ4 359 aaPredicted RBP11.58□□□□□ -0.56
CSPG4P12-202ENST00000559989 LINC00312Q9Y6C7 94 aa11.58□□□□□ -0.56
CSPG4P12-202ENST00000559989 IGLV1-36A0A0B4J1U3 117 aa11.58□□□□□ -0.56
CSPG4P12-202ENST00000559989 TRAV13-1A0A0B4J241 112 aa11.58□□□□□ -0.56
CSPG4P12-202ENST00000559989 LHBP01229 141 aa11.58□□□□□ -0.56
CSPG4P12-202ENST00000559989 TMEM242Q9NWH2 141 aa11.58□□□□□ -0.56
CSPG4P12-202ENST00000559989 NPIPB5A8MRT5 1133 aa11.57□□□□□ -0.56
CSPG4P12-202ENST00000559989 C17orf98A8MV24 154 aa11.57□□□□□ -0.56
CSPG4P12-202ENST00000559989 ZNF561-AS1K7EIQ3 104 aa11.57□□□□□ -0.56
CSPG4P12-202ENST00000559989 HEPN1Q6WQI6 88 aa11.57□□□□□ -0.56
CSPG4P12-202ENST00000559989 SCRT1Q9BWW7 348 aa11.57□□□□□ -0.56
CSPG4P12-202ENST00000559989 BRWD1Q9NSI6 2320 aa11.57□□□□□ -0.56
CSPG4P12-202ENST00000559989 TBX6O95947 436 aaPredicted RBP11.57□□□□□ -0.56
CSPG4P12-202ENST00000559989 CD160O95971 181 aa11.57□□□□□ -0.56
CSPG4P12-202ENST00000559989 ZNF474Q6S9Z5 364 aaPredicted RBP11.57□□□□□ -0.56
CSPG4P12-202ENST00000559989 IGHV3OR16-8A0A075B7F1 116 aa11.57□□□□□ -0.56
CSPG4P12-202ENST00000559989 CSTL1Q9H114 145 aa11.57□□□□□ -0.56
CSPG4P12-202ENST00000559989 RPUSD1Q9UJJ7 312 aaKnown RBP11.57□□□□□ -0.56
CSPG4P12-202ENST00000559989 TRGV1A0A0A0MS02 117 aa11.57□□□□□ -0.56
CSPG4P12-202ENST00000559989 UCP1P25874 307 aa11.57□□□□□ -0.56
CSPG4P12-202ENST00000559989 TCF15Q12870 199 aa11.57□□□□□ -0.56
CSPG4P12-202ENST00000559989 C18orf12Q96KH6 178 aa11.57□□□□□ -0.56
CSPG4P12-202ENST00000559989 hDV102S1A0JD36 115 aa11.56□□□□□ -0.56
CSPG4P12-202ENST00000559989 TMEM14DPA8MWL7 114 aa11.56□□□□□ -0.56
CSPG4P12-202ENST00000559989 A0A1W2PPV9 198 aa11.56□□□□□ -0.56
CSPG4P12-202ENST00000559989 NBL1P41271 181 aa11.56□□□□□ -0.56
CSPG4P12-202ENST00000559989 CRYBA2P53672 197 aa11.56□□□□□ -0.56
CSPG4P12-202ENST00000559989 C1QL4Q86Z23 238 aa11.56□□□□□ -0.56
CSPG4P12-202ENST00000559989 C9orf50Q5SZB4 431 aa11.56□□□□□ -0.56
CSPG4P12-202ENST00000559989 IMMP1LQ96LU5 166 aa11.56□□□□□ -0.56
CSPG4P12-202ENST00000559989 ATP6V0BQ99437 205 aa11.56□□□□□ -0.56
CSPG4P12-202ENST00000559989 HEATR5AQ86XA9 2040 aa11.56□□□□□ -0.56
CSPG4P12-202ENST00000559989 SEC61GP60059 68 aa11.56□□□□□ -0.56
CSPG4P12-202ENST00000559989 BAALCQ8WXS3 180 aa11.56□□□□□ -0.56
CSPG4P12-202ENST00000559989 DTX4Q9Y2E6 619 aa11.56□□□□□ -0.56
CSPG4P12-202ENST00000559989 SPAARA0A1B0GVQ0 90 aa11.55□□□□□ -0.56
CSPG4P12-202ENST00000559989 PPDPFLQ8WWR9 84 aa11.55□□□□□ -0.56
CSPG4P12-202ENST00000559989 PILRAQ9UKJ1 303 aa11.55□□□□□ -0.56
CSPG4P12-202ENST00000559989 GATA2P23769 480 aaPredicted RBP11.55□□□□□ -0.56
CSPG4P12-202ENST00000559989 IFITM3Q01628 133 aa11.55□□□□□ -0.56
CSPG4P12-202ENST00000559989 OCC1Q8TAD7 63 aa11.55□□□□□ -0.56
CSPG4P12-202ENST00000559989 NABP1Q96AH0 204 aa11.55□□□□□ -0.56
CSPG4P12-202ENST00000559989 F8W1H4 67 aa11.55□□□□□ -0.56
CSPG4P12-202ENST00000559989 SRXN1Q9BYN0 137 aa11.55□□□□□ -0.56
CSPG4P12-202ENST00000559989 CRIM1Q9NZV1 1036 aa11.55□□□□□ -0.56
CSPG4P12-202ENST00000559989 A0A1W2PPI3 338 aa11.55□□□□□ -0.56
CSPG4P12-202ENST00000559989 Q6ZT83 130 aa11.55□□□□□ -0.56
CSPG4P12-202ENST00000559989 HIST3H2BBQ8N257 126 aa11.55□□□□□ -0.56
CSPG4P12-202ENST00000559989 LRRK1Q38SD2 2015 aa11.55□□□□□ -0.56
CSPG4P12-202ENST00000559989 LY6G5BQ8NDX9 201 aa11.55□□□□□ -0.56
CSPG4P12-202ENST00000559989 SPXQ9BT56 116 aa11.54□□□□□ -0.56
CSPG4P12-202ENST00000559989 C1QTNF4Q9BXJ3 329 aa11.54□□□□□ -0.56
CSPG4P12-202ENST00000559989 DMRTC2Q8IXT2 367 aaPredicted RBP11.54□□□□□ -0.56
CSPG4P12-202ENST00000559989 PRCDQ00LT1 54 aa11.54□□□□□ -0.56
CSPG4P12-202ENST00000559989 DLEC1Q9Y238 1755 aa11.54□□□□□ -0.56
CSPG4P12-202ENST00000559989 AHCTF1Q8WYP5 2266 aa11.54□□□□□ -0.56
CSPG4P12-202ENST00000559989 WFDC12Q8WWY7 111 aa11.54□□□□□ -0.56
CSPG4P12-202ENST00000559989 C1orf159Q96HA4 380 aa11.54□□□□□ -0.56
CSPG4P12-202ENST00000559989 EFNB3Q15768 340 aa11.53□□□□□ -0.56
CSPG4P12-202ENST00000559989 ANKRD29Q8N6D5 301 aa11.53□□□□□ -0.56
CSPG4P12-202ENST00000559989 ARFGEF1Q9Y6D6 1849 aa11.53□□□□□ -0.56
CSPG4P12-202ENST00000559989 IGKV2-40A0A087WW87 121 aaPredicted RBP11.53□□□□□ -0.56
CSPG4P12-202ENST00000559989 YPEL1O60688 119 aa11.53□□□□□ -0.56
CSPG4P12-202ENST00000559989 FCN3O75636 299 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 170.8 ms