RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 OR1P1Q8NH06 330 aa4.04□□□□□ -1.76
SPG11-220ENST00000559933 ACY3Q96HD9 319 aa4.04□□□□□ -1.76
SPG11-220ENST00000559933 ZNF414Q96IQ9 312 aa4.04□□□□□ -1.76
SPG11-220ENST00000559933 AQP10Q96PS8 301 aa4.04□□□□□ -1.76
SPG11-220ENST00000559933 DUX3Q96PT4 197 aa4.04□□□□□ -1.76
SPG11-220ENST00000559933 CIB3Q96Q77 187 aaPredicted RBP4.04□□□□□ -1.76
SPG11-220ENST00000559933 SH3BGRL3Q9H299 93 aa4.04□□□□□ -1.76
SPG11-220ENST00000559933 GNB4Q9HAV0 340 aa4.04□□□□□ -1.76
SPG11-220ENST00000559933 C11orf21Q9P2W6 132 aa4.04□□□□□ -1.76
SPG11-220ENST00000559933 SELENOKQ9Y6D0 94 aa4.04□□□□□ -1.76
SPG11-220ENST00000559933 IGKV1D-37A0A075B6S9 117 aa4.03□□□□□ -1.76
SPG11-220ENST00000559933 IGKV1OR2-108A0A075B7D4 117 aa4.03□□□□□ -1.76
SPG11-220ENST00000559933 IGHV3OR16-8A0A075B7F1 116 aa4.03□□□□□ -1.76
SPG11-220ENST00000559933 TRBV9A0A0B4J1U6 114 aa4.03□□□□□ -1.76
SPG11-220ENST00000559933 PIGBOS1A0A0B4J2F0 54 aa4.03□□□□□ -1.76
SPG11-220ENST00000559933 OR2T8A6NH00 312 aa4.03□□□□□ -1.76
SPG11-220ENST00000559933 PPP5D1E7EU14 171 aa4.03□□□□□ -1.76
SPG11-220ENST00000559933 INS-IGF2F8WCM5 200 aa4.03□□□□□ -1.76
SPG11-220ENST00000559933 BCL2L11O43521 198 aa4.03□□□□□ -1.76
SPG11-220ENST00000559933 NDUFA7O95182 113 aa4.03□□□□□ -1.76
SPG11-220ENST00000559933 EDN2P20800 178 aa4.03□□□□□ -1.76
SPG11-220ENST00000559933 GATA2P23769 480 aaPredicted RBP4.03□□□□□ -1.76
SPG11-220ENST00000559933 PSMB8P28062 276 aa4.03□□□□□ -1.76
SPG11-220ENST00000559933 GPR183P32249 361 aa4.03□□□□□ -1.76
SPG11-220ENST00000559933 HTR2BP41595 481 aa4.03□□□□□ -1.76
SPG11-220ENST00000559933 RND2P52198 227 aa4.03□□□□□ -1.76
SPG11-220ENST00000559933 TAS2R30P59541 319 aa4.03□□□□□ -1.76
SPG11-220ENST00000559933 AKR1C1Q04828 323 aa4.03□□□□□ -1.76
SPG11-220ENST00000559933 CD69Q07108 199 aa4.03□□□□□ -1.76
SPG11-220ENST00000559933 EXOSC2Q13868 293 aaKnown RBP4.03□□□□□ -1.76
SPG11-220ENST00000559933 KIAA0141Q14154 515 aaPredicted RBP4.03□□□□□ -1.76
SPG11-220ENST00000559933 GAMTQ14353 236 aa4.03□□□□□ -1.76
SPG11-220ENST00000559933 DEFB136Q30KP8 78 aa4.03□□□□□ -1.76
SPG11-220ENST00000559933 C15orf32Q32M92 178 aa4.03□□□□□ -1.76
SPG11-220ENST00000559933 AKIRIN2Q53H80 203 aa4.03□□□□□ -1.76
SPG11-220ENST00000559933 PVRIGQ6DKI7 326 aa4.03□□□□□ -1.76
SPG11-220ENST00000559933 ACSM6Q6P461 480 aa4.03□□□□□ -1.76
SPG11-220ENST00000559933 TMEM65Q6PI78 240 aa4.03□□□□□ -1.76
SPG11-220ENST00000559933 TMEM182Q6ZP80 229 aaPredicted RBP4.03□□□□□ -1.76
SPG11-220ENST00000559933 TMUB2Q71RG4 321 aa4.03□□□□□ -1.76
SPG11-220ENST00000559933 CENPVQ7Z7K6 275 aaPredicted RBP4.03□□□□□ -1.76
SPG11-220ENST00000559933 STX12Q86Y82 276 aa4.03□□□□□ -1.76
SPG11-220ENST00000559933 KCNRGQ8N5I3 272 aa4.03□□□□□ -1.76
SPG11-220ENST00000559933 HSD17B11Q8NBQ5 300 aa4.03□□□□□ -1.76
SPG11-220ENST00000559933 ZNF114Q8NC26 417 aa4.03□□□□□ -1.76
SPG11-220ENST00000559933 OR1S2Q8NGQ3 325 aa4.03□□□□□ -1.76
SPG11-220ENST00000559933 WIPF2Q8TF74 440 aaPredicted RBP4.03□□□□□ -1.76
SPG11-220ENST00000559933 SCARB1Q8WTV0 552 aa4.03□□□□□ -1.76
SPG11-220ENST00000559933 ASB13Q8WXK3 278 aa4.03□□□□□ -1.76
SPG11-220ENST00000559933 RSG1Q9BU20 258 aa4.03□□□□□ -1.76
SPG11-220ENST00000559933 ARL6Q9H0F7 186 aa4.03□□□□□ -1.76
SPG11-220ENST00000559933 C16orf95Q9H693 158 aa4.03□□□□□ -1.76
SPG11-220ENST00000559933 CYTL1Q9NRR1 136 aa4.03□□□□□ -1.76
SPG11-220ENST00000559933 U3KQ87 197 aa4.03□□□□□ -1.76
SPG11-220ENST00000559933 ATRQ13535 2644 aa4.03□□□□□ -1.76
SPG11-220ENST00000559933 CFDP00746 253 aaPredicted RBP4.02□□□□□ -1.77
SPG11-220ENST00000559933 IGHG4P01861 327 aa4.02□□□□□ -1.77
SPG11-220ENST00000559933 FGF7P21781 194 aa4.02□□□□□ -1.77
SPG11-220ENST00000559933 NUP62P37198 522 aaPredicted RBP4.02□□□□□ -1.77
SPG11-220ENST00000559933 RAB9AP51151 201 aa4.02□□□□□ -1.77
SPG11-220ENST00000559933 ELLP55199 621 aaPredicted RBP4.02□□□□□ -1.77
SPG11-220ENST00000559933 PROK1P58294 105 aa4.02□□□□□ -1.77
SPG11-220ENST00000559933 DLK1P80370 383 aa4.02□□□□□ -1.77
SPG11-220ENST00000559933 ZNF90Q03938 601 aa4.02□□□□□ -1.77
SPG11-220ENST00000559933 BAXQ07812 192 aa4.02□□□□□ -1.77
SPG11-220ENST00000559933 OR2F1Q13607 317 aa4.02□□□□□ -1.77
SPG11-220ENST00000559933 OPCMLQ14982 345 aa4.02□□□□□ -1.77
SPG11-220ENST00000559933 TIGITQ495A1 244 aa4.02□□□□□ -1.77
SPG11-220ENST00000559933 Q56UQ5 140 aa4.02□□□□□ -1.77
SPG11-220ENST00000559933 FAM74A1Q5RGS3 127 aa4.02□□□□□ -1.77
SPG11-220ENST00000559933 CLEC19AQ6UXS0 136 aa4.02□□□□□ -1.77
SPG11-220ENST00000559933 INO80EQ8NBZ0 244 aaPredicted RBP4.02□□□□□ -1.77
SPG11-220ENST00000559933 OR5AU1Q8NGC0 362 aa4.02□□□□□ -1.77
SPG11-220ENST00000559933 OR10P1Q8NGE3 313 aa4.02□□□□□ -1.77
SPG11-220ENST00000559933 ZNF502Q8TBZ5 544 aa4.02□□□□□ -1.77
SPG11-220ENST00000559933 RNASEH2CQ8TDP1 164 aaKnown RBP4.02□□□□□ -1.77
SPG11-220ENST00000559933 PCNPQ8WW12 178 aaKnown RBP4.02□□□□□ -1.77
SPG11-220ENST00000559933 ST8SIA2Q92186 375 aa4.02□□□□□ -1.77
SPG11-220ENST00000559933 NPIPB3Q92617 1050 aa4.02□□□□□ -1.77
SPG11-220ENST00000559933 HYLS1Q96M11 299 aa4.02□□□□□ -1.77
SPG11-220ENST00000559933 MGST2Q99735 147 aa4.02□□□□□ -1.77
SPG11-220ENST00000559933 ATP5SQ99766 215 aa4.02□□□□□ -1.77
SPG11-220ENST00000559933 CITED2Q99967 270 aaPredicted RBP4.02□□□□□ -1.77
SPG11-220ENST00000559933 SRSF8Q9BRL6 282 aaKnown RBP4.02□□□□□ -1.77
SPG11-220ENST00000559933 CHRDL1Q9BU40 450 aa4.02□□□□□ -1.77
SPG11-220ENST00000559933 TMEM147Q9BVK8 224 aa4.02□□□□□ -1.77
SPG11-220ENST00000559933 SLC25A31Q9H0C2 315 aa4.02□□□□□ -1.77
SPG11-220ENST00000559933 VSIRQ9H7M9 311 aa4.02□□□□□ -1.77
SPG11-220ENST00000559933 ZFP57Q9NU63 452 aa4.02□□□□□ -1.77
SPG11-220ENST00000559933 IGHV4OR15-8A0A075B7B6 117 aa4.01□□□□□ -1.77
SPG11-220ENST00000559933 A0A087WW49 117 aa4.01□□□□□ -1.77
SPG11-220ENST00000559933 KANTRA0A1W2PQU2 76 aa4.01□□□□□ -1.77
SPG11-220ENST00000559933 CLPSL1A2RUU4 121 aa4.01□□□□□ -1.77
SPG11-220ENST00000559933 HMSDA8MTL9 139 aa4.01□□□□□ -1.77
SPG11-220ENST00000559933 BMPR1BO00238 502 aa4.01□□□□□ -1.77
SPG11-220ENST00000559933 IGKV1-17P01599 117 aa4.01□□□□□ -1.77
SPG11-220ENST00000559933 IGLC1P0CG04 106 aa4.01□□□□□ -1.77
SPG11-220ENST00000559933 OR10J1P30954 320 aa4.01□□□□□ -1.77
SPG11-220ENST00000559933 S100A11P31949 105 aa4.01□□□□□ -1.77
SPG11-220ENST00000559933 SUB1P53999 127 aaKnown RBP eCLIP4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms