RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 CD5LO43866 347 aa14.16□□□□□ -0.14
SNX1-208ENST00000559844 CRYGCP07315 174 aa14.16□□□□□ -0.14
SNX1-208ENST00000559844 HOXB4P17483 251 aaPredicted RBP14.16□□□□□ -0.14
SNX1-208ENST00000559844 RAB5AP20339 215 aa14.16□□□□□ -0.14
SNX1-208ENST00000559844 LGALS4P56470 323 aa14.16□□□□□ -0.14
SNX1-208ENST00000559844 SELENOTP62341 195 aa14.16□□□□□ -0.14
SNX1-208ENST00000559844 MMDQ15546 238 aa14.16□□□□□ -0.14
SNX1-208ENST00000559844 LHFPL4Q7Z7J7 247 aa14.16□□□□□ -0.14
SNX1-208ENST00000559844 SRSF12Q8WXF0 261 aaKnown RBP14.16□□□□□ -0.14
SNX1-208ENST00000559844 NPIPB3Q92617 1050 aa14.16□□□□□ -0.14
SNX1-208ENST00000559844 YPEL4Q96NS1 127 aa14.16□□□□□ -0.14
SNX1-208ENST00000559844 TMEM167BQ9NRX6 74 aa14.16□□□□□ -0.14
SNX1-208ENST00000559844 ARL2-SNX15V9GYD0 113 aa14.16□□□□□ -0.14
SNX1-208ENST00000559844 TCRBV4S1A1TA0A5B7 111 aa14.15□□□□□ -0.14
SNX1-208ENST00000559844 TEX22C9J3V5 150 aa14.15□□□□□ -0.14
SNX1-208ENST00000559844 NDUFA3O95167 84 aa14.15□□□□□ -0.14
SNX1-208ENST00000559844 FOSL1P15407 271 aa14.15□□□□□ -0.14
SNX1-208ENST00000559844 AREGP15514 252 aa14.15□□□□□ -0.14
SNX1-208ENST00000559844 ATP5G3P48201 142 aa14.15□□□□□ -0.14
SNX1-208ENST00000559844 RAB5BP61020 215 aa14.15□□□□□ -0.14
SNX1-208ENST00000559844 MIR17HGQ75NE6 70 aa14.15□□□□□ -0.14
SNX1-208ENST00000559844 OR1L4Q8NGR5 311 aa14.15□□□□□ -0.14
SNX1-208ENST00000559844 OR2T10Q8NGZ9 312 aa14.15□□□□□ -0.14
SNX1-208ENST00000559844 MISP3Q96FF7 219 aa14.15□□□□□ -0.14
SNX1-208ENST00000559844 F11RQ9Y624 299 aaKnown RBP14.15□□□□□ -0.14
SNX1-208ENST00000559844 C1orf196B1AJZ1 125 aa14.14□□□□□ -0.15
SNX1-208ENST00000559844 TOX4O94842 621 aa14.14□□□□□ -0.15
SNX1-208ENST00000559844 PQLC2Q6ZP29 291 aa14.14□□□□□ -0.15
SNX1-208ENST00000559844 MALSU1Q96EH3 234 aa14.14□□□□□ -0.15
SNX1-208ENST00000559844 PFDN5Q99471 154 aa14.14□□□□□ -0.15
SNX1-208ENST00000559844 CLDN34H7C241 214 aa14.14□□□□□ -0.15
SNX1-208ENST00000559844 GATA2P23769 480 aaPredicted RBP14.14□□□□□ -0.15
SNX1-208ENST00000559844 ADIRFQ15847 76 aa14.14□□□□□ -0.15
SNX1-208ENST00000559844 EAF1Q96JC9 268 aaPredicted RBP14.14□□□□□ -0.15
SNX1-208ENST00000559844 TBL2Q9Y4P3 447 aaKnown RBP14.14□□□□□ -0.15
SNX1-208ENST00000559844 J3QLI3 93 aa14.13□□□□□ -0.15
SNX1-208ENST00000559844 CNIH1O95406 144 aa14.13□□□□□ -0.15
SNX1-208ENST00000559844 RND2P52198 227 aa14.13□□□□□ -0.15
SNX1-208ENST00000559844 BPIFB3P59826 476 aa14.13□□□□□ -0.15
SNX1-208ENST00000559844 TBX15Q96SF7 602 aa14.13□□□□□ -0.15
SNX1-208ENST00000559844 DNAJC4Q9NNZ3 241 aa14.13□□□□□ -0.15
SNX1-208ENST00000559844 YAE1D1Q9NRH1 226 aa14.13□□□□□ -0.15
SNX1-208ENST00000559844 TNCP24821 2201 aa14.13□□□□□ -0.15
SNX1-208ENST00000559844 SONP18583 2426 aaKnown RBP14.13□□□□□ -0.15
SNX1-208ENST00000559844 A0A1W2PRD5 423 aa14.13□□□□□ -0.15
SNX1-208ENST00000559844 A0A1W2PRF3 423 aa14.13□□□□□ -0.15
SNX1-208ENST00000559844 A0A1W2PRM7 423 aa14.13□□□□□ -0.15
SNX1-208ENST00000559844 FCN1O00602 326 aa14.13□□□□□ -0.15
SNX1-208ENST00000559844 LY6G6DO95868 133 aa14.13□□□□□ -0.15
SNX1-208ENST00000559844 RPL23P62829 140 aaKnown RBP14.13□□□□□ -0.15
SNX1-208ENST00000559844 SSX2Q16385 188 aa14.13□□□□□ -0.15
SNX1-208ENST00000559844 UHRF2Q96PU4 802 aa14.13□□□□□ -0.15
SNX1-208ENST00000559844 IGKV1D-37A0A075B6S9 117 aa14.12□□□□□ -0.15
SNX1-208ENST00000559844 COX7A2P2O60397 106 aa14.12□□□□□ -0.15
SNX1-208ENST00000559844 AVPP01185 164 aa14.12□□□□□ -0.15
SNX1-208ENST00000559844 C8orf88P0DMB2 117 aa14.12□□□□□ -0.15
SNX1-208ENST00000559844 MFAP2P55001 183 aa14.12□□□□□ -0.15
SNX1-208ENST00000559844 SSBP2P81877 361 aaPredicted RBP14.12□□□□□ -0.15
SNX1-208ENST00000559844 HES1Q14469 280 aa14.12□□□□□ -0.15
SNX1-208ENST00000559844 OR1L6Q8NGR2 347 aa14.12□□□□□ -0.15
SNX1-208ENST00000559844 TRGV9Q99603 122 aa14.12□□□□□ -0.15
SNX1-208ENST00000559844 SLC25A33Q9BSK2 321 aa14.12□□□□□ -0.15
SNX1-208ENST00000559844 DOK5Q9P104 306 aa14.12□□□□□ -0.15
SNX1-208ENST00000559844 SVEP1Q4LDE5 3571 aa14.12□□□□□ -0.15
SNX1-208ENST00000559844 PSMB11A5LHX3 300 aa14.11□□□□□ -0.15
SNX1-208ENST00000559844 NPPCP23582 126 aa14.11□□□□□ -0.15
SNX1-208ENST00000559844 UBE2E1P51965 193 aa14.11□□□□□ -0.15
SNX1-208ENST00000559844 ELOBQ15370 118 aa14.11□□□□□ -0.15
SNX1-208ENST00000559844 TMEM116Q8NCL8 245 aa14.11□□□□□ -0.15
SNX1-208ENST00000559844 TMEM37Q8WXS4 190 aa14.11□□□□□ -0.15
SNX1-208ENST00000559844 YTHDF2Q9Y5A9 579 aaKnown RBP14.11□□□□□ -0.15
SNX1-208ENST00000559844 BIN3Q9NQY0 253 aa14.11□□□□□ -0.15
SNX1-208ENST00000559844 TNFRSF19Q9NS68 423 aa14.11□□□□□ -0.15
SNX1-208ENST00000559844 NDUFB4O95168 129 aa14.1□□□□□ -0.15
SNX1-208ENST00000559844 KIAA0141Q14154 515 aaPredicted RBP14.1□□□□□ -0.15
SNX1-208ENST00000559844 EBI3Q14213 229 aa14.1□□□□□ -0.15
SNX1-208ENST00000559844 C5orf64Q2M2E5 130 aa14.1□□□□□ -0.15
SNX1-208ENST00000559844 C10orf113Q5VZT2 155 aa14.1□□□□□ -0.15
SNX1-208ENST00000559844 OR51G1Q8NGK1 321 aa14.1□□□□□ -0.15
SNX1-208ENST00000559844 OR4X1Q8NH49 305 aa14.1□□□□□ -0.15
SNX1-208ENST00000559844 MRPL36Q9P0J6 103 aaKnown RBP14.1□□□□□ -0.15
SNX1-208ENST00000559844 OR7C2O60412 319 aa14.09□□□□□ -0.15
SNX1-208ENST00000559844 APELAP0DMC3 54 aa14.09□□□□□ -0.15
SNX1-208ENST00000559844 FXYD3Q14802 87 aa14.09□□□□□ -0.15
SNX1-208ENST00000559844 Q8WTZ3 238 aa14.09□□□□□ -0.15
SNX1-208ENST00000559844 ANAPC16Q96DE5 110 aa14.09□□□□□ -0.15
SNX1-208ENST00000559844 GSX1Q9H4S2 264 aaPredicted RBP14.09□□□□□ -0.15
SNX1-208ENST00000559844 ELOA3CA0A087WX78 387 aaPredicted RBP14.09□□□□□ -0.15
SNX1-208ENST00000559844 TRAV40A0A0B4J280 105 aa14.09□□□□□ -0.15
SNX1-208ENST00000559844 IGHV3-48P01763 117 aa14.09□□□□□ -0.15
SNX1-208ENST00000559844 ZNF90Q03938 601 aa14.09□□□□□ -0.15
SNX1-208ENST00000559844 C1QL4Q86Z23 238 aa14.09□□□□□ -0.15
SNX1-208ENST00000559844 Q8N6K4 173 aa14.09□□□□□ -0.15
SNX1-208ENST00000559844 C11orf52Q96A22 123 aa14.09□□□□□ -0.15
SNX1-208ENST00000559844 HIVEP2P31629 2446 aa14.09□□□□□ -0.15
SNX1-208ENST00000559844 IGHV3OR16-10A0A075B7F0 116 aa14.08□□□□□ -0.16
SNX1-208ENST00000559844 CTRB1P17538 263 aa14.08□□□□□ -0.16
SNX1-208ENST00000559844 CTRB2Q6GPI1 263 aa14.08□□□□□ -0.16
SNX1-208ENST00000559844 ZNF343Q6P1L6 599 aa14.08□□□□□ -0.16
SNX1-208ENST00000559844 Q71RC1 249 aaPredicted RBP14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms