RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 SCGB2A1O75556 95 aa8.08□□□□□ -1.12
TPM1-221ENST00000559831 JTBO76095 146 aa8.08□□□□□ -1.12
TPM1-221ENST00000559831 CLEC3BP05452 202 aa8.08□□□□□ -1.12
TPM1-221ENST00000559831 CAMLGP49069 296 aa8.08□□□□□ -1.12
TPM1-221ENST00000559831 EIF5AP63241 154 aaKnown RBP8.08□□□□□ -1.12
TPM1-221ENST00000559831 RAB31Q13636 194 aa8.08□□□□□ -1.12
TPM1-221ENST00000559831 C18orf65Q6ZTR6 163 aa8.08□□□□□ -1.12
TPM1-221ENST00000559831 SLC51BQ86UW2 128 aa8.08□□□□□ -1.12
TPM1-221ENST00000559831 ZNF709Q8N972 641 aa8.08□□□□□ -1.12
TPM1-221ENST00000559831 THAP8Q8NA92 274 aa8.08□□□□□ -1.12
TPM1-221ENST00000559831 TMEM116Q8NCL8 245 aa8.08□□□□□ -1.12
TPM1-221ENST00000559831 MYOZ3Q8TDC0 251 aa8.08□□□□□ -1.12
TPM1-221ENST00000559831 MGST2Q99735 147 aa8.08□□□□□ -1.12
TPM1-221ENST00000559831 TXN2Q99757 166 aa8.08□□□□□ -1.12
TPM1-221ENST00000559831 RSG1Q9BU20 258 aa8.08□□□□□ -1.12
TPM1-221ENST00000559831 NPCDR1Q9BY65 106 aa8.08□□□□□ -1.12
TPM1-221ENST00000559831 IGKV1D-37A0A075B6S9 117 aa8.07□□□□□ -1.12
TPM1-221ENST00000559831 TRAV30A0A087WSZ9 112 aa8.07□□□□□ -1.12
TPM1-221ENST00000559831 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.07□□□□□ -1.12
TPM1-221ENST00000559831 C17orf112F2Z3M2 114 aa8.07□□□□□ -1.12
TPM1-221ENST00000559831 AGPAT2O15120 278 aa8.07□□□□□ -1.12
TPM1-221ENST00000559831 NUPL2O15504 423 aaKnown RBP8.07□□□□□ -1.12
TPM1-221ENST00000559831 TGOLN2O43493 480 aa8.07□□□□□ -1.12
TPM1-221ENST00000559831 TRBV12-3P01733 135 aa8.07□□□□□ -1.12
TPM1-221ENST00000559831 LGALS1P09382 135 aaKnown RBP8.07□□□□□ -1.12
TPM1-221ENST00000559831 IGLC1P0CG04 106 aa8.07□□□□□ -1.12
TPM1-221ENST00000559831 TPT1P13693 172 aaKnown RBP8.07□□□□□ -1.12
TPM1-221ENST00000559831 ATP6V0CP27449 155 aa8.07□□□□□ -1.12
TPM1-221ENST00000559831 FCGR2BP31994 310 aaPredicted RBP8.07□□□□□ -1.12
TPM1-221ENST00000559831 ARL3P36405 182 aa8.07□□□□□ -1.12
TPM1-221ENST00000559831 KRTAP10-3P60369 221 aa8.07□□□□□ -1.12
TPM1-221ENST00000559831 ZNF90Q03938 601 aa8.07□□□□□ -1.12
TPM1-221ENST00000559831 AWAT1Q58HT5 328 aa8.07□□□□□ -1.12
TPM1-221ENST00000559831 MIC13Q5XKP0 118 aa8.07□□□□□ -1.12
TPM1-221ENST00000559831 ZNF343Q6P1L6 599 aa8.07□□□□□ -1.12
TPM1-221ENST00000559831 CYP2G1PQ6ZSU1 146 aa8.07□□□□□ -1.12
TPM1-221ENST00000559831 KLHL30-AS1Q8NEE0 82 aa8.07□□□□□ -1.12
TPM1-221ENST00000559831 ST8SIA2Q92186 375 aa8.07□□□□□ -1.12
TPM1-221ENST00000559831 UBE2E2Q96LR5 201 aa8.07□□□□□ -1.12
TPM1-221ENST00000559831 TRGV9Q99603 122 aa8.07□□□□□ -1.12
TPM1-221ENST00000559831 CITED2Q99967 270 aaPredicted RBP8.07□□□□□ -1.12
TPM1-221ENST00000559831 GINS3Q9BRX5 216 aa8.07□□□□□ -1.12
TPM1-221ENST00000559831 CHRDL1Q9BU40 450 aa8.07□□□□□ -1.12
TPM1-221ENST00000559831 C19orf24Q9BVV8 132 aa8.07□□□□□ -1.12
TPM1-221ENST00000559831 PARD6GQ9BYG4 376 aaPredicted RBP8.07□□□□□ -1.12
TPM1-221ENST00000559831 SH3BGRL3Q9H299 93 aa8.07□□□□□ -1.12
TPM1-221ENST00000559831 GAR1Q9NY12 217 aaKnown RBP8.07□□□□□ -1.12
TPM1-221ENST00000559831 LSM4Q9Y4Z0 139 aaKnown RBP8.07□□□□□ -1.12
TPM1-221ENST00000559831 RFNGQ9Y644 331 aa8.07□□□□□ -1.12
TPM1-221ENST00000559831 IGHV3-35A0A0C4DH35 117 aa8.06□□□□□ -1.12
TPM1-221ENST00000559831 MPDU1O75352 247 aa8.06□□□□□ -1.12
TPM1-221ENST00000559831 GATA2P23769 480 aaPredicted RBP8.06□□□□□ -1.12
TPM1-221ENST00000559831 ELLP55199 621 aaPredicted RBP8.06□□□□□ -1.12
TPM1-221ENST00000559831 ZNF616Q08AN1 781 aa8.06□□□□□ -1.12
TPM1-221ENST00000559831 BAP18Q8IXM2 172 aa8.06□□□□□ -1.12
TPM1-221ENST00000559831 BPIFCQ8NFQ6 507 aa8.06□□□□□ -1.12
TPM1-221ENST00000559831 STOML3Q8TAV4 291 aa8.06□□□□□ -1.12
TPM1-221ENST00000559831 WFDC12Q8WWY7 111 aa8.06□□□□□ -1.12
TPM1-221ENST00000559831 GGTLC1Q9BX51 225 aa8.06□□□□□ -1.12
TPM1-221ENST00000559831 ARV1Q9H2C2 271 aa8.06□□□□□ -1.12
TPM1-221ENST00000559831 SLC25A32Q9H2D1 315 aa8.06□□□□□ -1.12
TPM1-221ENST00000559831 PEF1Q9UBV8 284 aaKnown RBP8.06□□□□□ -1.12
TPM1-221ENST00000559831 TSSC4Q9Y5U2 329 aaPredicted RBP8.06□□□□□ -1.12
TPM1-221ENST00000559831 PXMP4Q9Y6I8 212 aa8.06□□□□□ -1.12
TPM1-221ENST00000559831 NF1P21359 2839 aa8.06□□□□□ -1.12
TPM1-221ENST00000559831 BMPR1BO00238 502 aa8.05□□□□□ -1.12
TPM1-221ENST00000559831 IGKV1-17P01599 117 aa8.05□□□□□ -1.12
TPM1-221ENST00000559831 FABP1P07148 127 aa8.05□□□□□ -1.12
TPM1-221ENST00000559831 CTSGP08311 255 aa8.05□□□□□ -1.12
TPM1-221ENST00000559831 ADMP35318 185 aa8.05□□□□□ -1.12
TPM1-221ENST00000559831 CDX1P47902 265 aaPredicted RBP8.05□□□□□ -1.12
TPM1-221ENST00000559831 DEFB136Q30KP8 78 aa8.05□□□□□ -1.12
TPM1-221ENST00000559831 NSUN5P1Q3KNT7 163 aa8.05□□□□□ -1.12
TPM1-221ENST00000559831 FAM209BQ5JX69 171 aa8.05□□□□□ -1.12
TPM1-221ENST00000559831 FFAR4Q5NUL3 377 aa8.05□□□□□ -1.12
TPM1-221ENST00000559831 SPSB3Q6PJ21 355 aa8.05□□□□□ -1.12
TPM1-221ENST00000559831 TMEM182Q6ZP80 229 aaPredicted RBP8.05□□□□□ -1.12
TPM1-221ENST00000559831 C8orf86Q6ZUL3 223 aa8.05□□□□□ -1.12
TPM1-221ENST00000559831 STPG3Q8N7X2 389 aa8.05□□□□□ -1.12
TPM1-221ENST00000559831 OR2G3Q8NGZ4 309 aa8.05□□□□□ -1.12
TPM1-221ENST00000559831 C4orf3Q8WVX3 66 aa8.05□□□□□ -1.12
TPM1-221ENST00000559831 TMED6Q8WW62 240 aa8.05□□□□□ -1.12
TPM1-221ENST00000559831 GNPNAT1Q96EK6 184 aaPredicted RBP8.05□□□□□ -1.12
TPM1-221ENST00000559831 KCNIP2Q9NS61 270 aa8.05□□□□□ -1.12
TPM1-221ENST00000559831 SLC45A2Q9UMX9 530 aa8.05□□□□□ -1.12
TPM1-221ENST00000559831 TIMM9Q9Y5J7 89 aa8.05□□□□□ -1.12
TPM1-221ENST00000559831 SETD2Q9BYW2 2564 aaPredicted RBP8.05□□□□□ -1.12
TPM1-221ENST00000559831 IGHV4OR15-8A0A075B7B6 117 aa8.04□□□□□ -1.12
TPM1-221ENST00000559831 A0A087WW49 117 aa8.04□□□□□ -1.12
TPM1-221ENST00000559831 GGCTO75223 188 aaKnown RBP8.04□□□□□ -1.12
TPM1-221ENST00000559831 YIF1AO95070 293 aa8.04□□□□□ -1.12
TPM1-221ENST00000559831 OR2C1O95371 312 aa8.04□□□□□ -1.12
TPM1-221ENST00000559831 TSPAN15O95858 294 aa8.04□□□□□ -1.12
TPM1-221ENST00000559831 TOMM40O96008 361 aa8.04□□□□□ -1.12
TPM1-221ENST00000559831 HSPB1P04792 205 aaKnown RBP8.04□□□□□ -1.12
TPM1-221ENST00000559831 LINC00869P0C866 280 aa8.04□□□□□ -1.12
TPM1-221ENST00000559831 RD3LP0DJH9 198 aa8.04□□□□□ -1.12
TPM1-221ENST00000559831 PSG1P11464 419 aa8.04□□□□□ -1.12
TPM1-221ENST00000559831 RPL29P47914 159 aaKnown RBP8.04□□□□□ -1.12
TPM1-221ENST00000559831 YPEL3P61236 119 aaPredicted RBP8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms