RNA–Protein interactions for RNA: ENST00000559347.1

SPG11-216, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 716 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-216ENST00000559347 C4orf48Q5BLP8 95 aa8.14□□□□□ -1.11
SPG11-216ENST00000559347 FAM90A2PQ658T7 463 aa8.14□□□□□ -1.11
SPG11-216ENST00000559347 PRSS54Q6PEW0 395 aa8.14□□□□□ -1.11
SPG11-216ENST00000559347 OR1S1Q8NH92 325 aa8.14□□□□□ -1.11
SPG11-216ENST00000559347 RBKSQ9H477 322 aa8.14□□□□□ -1.11
SPG11-216ENST00000559347 VSIRQ9H7M9 311 aa8.14□□□□□ -1.11
SPG11-216ENST00000559347 SACSQ9NZJ4 4579 aa8.13□□□□□ -1.11
SPG11-216ENST00000559347 TRAV30A0A087WSZ9 112 aa8.13□□□□□ -1.11
SPG11-216ENST00000559347 LOC102724200A0A096LPH7 203 aaPredicted RBP8.13□□□□□ -1.11
SPG11-216ENST00000559347 NAP1L6A6NFF2 107 aa8.13□□□□□ -1.11
SPG11-216ENST00000559347 PITX3O75364 302 aa8.13□□□□□ -1.11
SPG11-216ENST00000559347 NDUFB6O95139 128 aa8.13□□□□□ -1.11
SPG11-216ENST00000559347 SFT2D2O95562 160 aa8.13□□□□□ -1.11
SPG11-216ENST00000559347 APOHP02749 345 aaPredicted RBP8.13□□□□□ -1.11
SPG11-216ENST00000559347 IGLC1P0CG04 106 aa8.13□□□□□ -1.11
SPG11-216ENST00000559347 SLC25A6P12236 298 aa8.13□□□□□ -1.11
SPG11-216ENST00000559347 IL7P13232 177 aa8.13□□□□□ -1.11
SPG11-216ENST00000559347 BMI1P35226 326 aa8.13□□□□□ -1.11
SPG11-216ENST00000559347 INPP1P49441 399 aa8.13□□□□□ -1.11
SPG11-216ENST00000559347 UBE2MP61081 183 aaKnown RBP8.13□□□□□ -1.11
SPG11-216ENST00000559347 TIGITQ495A1 244 aa8.13□□□□□ -1.11
SPG11-216ENST00000559347 CASC10Q5T4H9 136 aa8.13□□□□□ -1.11
SPG11-216ENST00000559347 NDUFA13Q9P0J0 144 aa8.13□□□□□ -1.11
SPG11-216ENST00000559347 U3KQ87 197 aa8.13□□□□□ -1.11
SPG11-216ENST00000559347 RYR2Q92736 4967 aa8.12□□□□□ -1.11
SPG11-216ENST00000559347 IGKV3-7A0A075B6H7 116 aa8.12□□□□□ -1.11
SPG11-216ENST00000559347 FAM90A26D6RGX4 464 aa8.12□□□□□ -1.11
SPG11-216ENST00000559347 IFNA10P01566 189 aa8.12□□□□□ -1.11
SPG11-216ENST00000559347 CD5P06127 495 aa8.12□□□□□ -1.11
SPG11-216ENST00000559347 OR10J1P30954 320 aa8.12□□□□□ -1.11
SPG11-216ENST00000559347 ETFRF1Q6IPR1 90 aa8.12□□□□□ -1.11
SPG11-216ENST00000559347 TCF24Q7RTU0 167 aa8.12□□□□□ -1.11
SPG11-216ENST00000559347 NOXA1Q86UR1 476 aa8.12□□□□□ -1.11
SPG11-216ENST00000559347 LILRB2Q8N423 598 aa8.12□□□□□ -1.11
SPG11-216ENST00000559347 OR1S2Q8NGQ3 325 aa8.12□□□□□ -1.11
SPG11-216ENST00000559347 MAP6D1Q9H9H5 199 aa8.12□□□□□ -1.11
SPG11-216ENST00000559347 TMED3Q9Y3Q3 217 aa8.12□□□□□ -1.11
SPG11-216ENST00000559347 IGHV3-66A0A0C4DH42 116 aa8.11□□□□□ -1.11
SPG11-216ENST00000559347 LYL1P12980 280 aa8.11□□□□□ -1.11
SPG11-216ENST00000559347 NPPCP23582 126 aa8.11□□□□□ -1.11
SPG11-216ENST00000559347 CRYBB3P26998 211 aa8.11□□□□□ -1.11
SPG11-216ENST00000559347 TFPI2P48307 235 aa8.11□□□□□ -1.11
SPG11-216ENST00000559347 YPEL3P61236 119 aaPredicted RBP8.11□□□□□ -1.11
SPG11-216ENST00000559347 ZNF124Q15973 351 aa8.11□□□□□ -1.11
SPG11-216ENST00000559347 GBGT1Q8N5D6 347 aa8.11□□□□□ -1.11
SPG11-216ENST00000559347 ACY3Q96HD9 319 aa8.11□□□□□ -1.11
SPG11-216ENST00000559347 METTL26Q96S19 204 aa8.11□□□□□ -1.11
SPG11-216ENST00000559347 C7orf50Q9BRJ6 194 aaKnown RBP8.11□□□□□ -1.11
SPG11-216ENST00000559347 MS4A6AQ9H2W1 248 aa8.11□□□□□ -1.11
SPG11-216ENST00000559347 TMEM231Q9H6L2 316 aa8.11□□□□□ -1.11
SPG11-216ENST00000559347 FLVCR2Q9UPI3 526 aa8.11□□□□□ -1.11
SPG11-216ENST00000559347 TRAV2A0A0B4J234 112 aa8.1□□□□□ -1.11
SPG11-216ENST00000559347 LINC00854A0A1B0GVQ3 168 aa8.1□□□□□ -1.11
SPG11-216ENST00000559347 C9orf170A2RU37 121 aa8.1□□□□□ -1.11
SPG11-216ENST00000559347 DFFBO76075 338 aa8.1□□□□□ -1.11
SPG11-216ENST00000559347 TOMM40O96008 361 aa8.1□□□□□ -1.11
SPG11-216ENST00000559347 HOXB5P09067 269 aa8.1□□□□□ -1.11
SPG11-216ENST00000559347 IAPPP10997 89 aa8.1□□□□□ -1.11
SPG11-216ENST00000559347 P2RY1P47900 373 aa8.1□□□□□ -1.11
SPG11-216ENST00000559347 APOC4P55056 127 aa8.1□□□□□ -1.11
SPG11-216ENST00000559347 ATP5IP56385 69 aaPredicted RBP8.1□□□□□ -1.11
SPG11-216ENST00000559347 DHRS2Q13268 280 aa8.1□□□□□ -1.11
SPG11-216ENST00000559347 GGNBP1Q5YKI7 109 aa8.1□□□□□ -1.11
SPG11-216ENST00000559347 APRG1Q8IVJ8 170 aa8.1□□□□□ -1.11
SPG11-216ENST00000559347 NPIPB3Q92617 1050 aa8.1□□□□□ -1.11
SPG11-216ENST00000559347 OVOL2Q9BRP0 275 aa8.1□□□□□ -1.11
SPG11-216ENST00000559347 ALMS1Q8TCU4 4167 aa8.09□□□□□ -1.11
SPG11-216ENST00000559347 KIR2DL5BA0A0G2JN68 375 aa8.09□□□□□ -1.11
SPG11-216ENST00000559347 KIR2DL5BA0A0G2JPC4 375 aa8.09□□□□□ -1.11
SPG11-216ENST00000559347 A0A1W2PS18 150 aa8.09□□□□□ -1.11
SPG11-216ENST00000559347 CENPXA8MT69 81 aa8.09□□□□□ -1.11
SPG11-216ENST00000559347 ADAP1O75689 374 aa8.09□□□□□ -1.11
SPG11-216ENST00000559347 IFNA4P05014 189 aa8.09□□□□□ -1.11
SPG11-216ENST00000559347 IL4P05112 153 aa8.09□□□□□ -1.11
SPG11-216ENST00000559347 HNRNPCP07910 306 aaKnown RBP eCLIP8.09□□□□□ -1.11
SPG11-216ENST00000559347 OR4E1P0C645 316 aa8.09□□□□□ -1.11
SPG11-216ENST00000559347 PAFAH1B2P68402 229 aa8.09□□□□□ -1.11
SPG11-216ENST00000559347 USF2Q15853 346 aaPredicted RBP8.09□□□□□ -1.11
SPG11-216ENST00000559347 DEFB135Q30KP9 77 aa8.09□□□□□ -1.11
SPG11-216ENST00000559347 LYG2Q86SG7 212 aa8.09□□□□□ -1.11
SPG11-216ENST00000559347 KIR2DL5AQ8N109 375 aa8.09□□□□□ -1.11
SPG11-216ENST00000559347 FAM24BQ8N5W8 94 aa8.09□□□□□ -1.11
SPG11-216ENST00000559347 KIR2DL5BQ8NHK3 375 aa8.09□□□□□ -1.11
SPG11-216ENST00000559347 Q8WTZ3 238 aa8.09□□□□□ -1.11
SPG11-216ENST00000559347 NARS2Q96I59 477 aaKnown RBP8.09□□□□□ -1.11
SPG11-216ENST00000559347 U3KQE9 123 aa8.09□□□□□ -1.11
SPG11-216ENST00000559347 DNAH1Q9P2D7 4330 aa8.08□□□□□ -1.12
SPG11-216ENST00000559347 IGKV1D-37A0A075B6S9 117 aa8.08□□□□□ -1.12
SPG11-216ENST00000559347 MPTX1A8MV57 137 aa8.08□□□□□ -1.12
SPG11-216ENST00000559347 PRSS46E5RG02 174 aa8.08□□□□□ -1.12
SPG11-216ENST00000559347 PLA2G10O15496 165 aa8.08□□□□□ -1.12
SPG11-216ENST00000559347 SYNGR2O43760 224 aa8.08□□□□□ -1.12
SPG11-216ENST00000559347 MED6O75586 246 aa8.08□□□□□ -1.12
SPG11-216ENST00000559347 RPL35AP18077 110 aaKnown RBP8.08□□□□□ -1.12
SPG11-216ENST00000559347 ANXA7P20073 488 aaKnown RBP8.08□□□□□ -1.12
SPG11-216ENST00000559347 RPL11P62913 178 aaKnown RBP8.08□□□□□ -1.12
SPG11-216ENST00000559347 GAMTQ14353 236 aa8.08□□□□□ -1.12
SPG11-216ENST00000559347 ZFAND6Q6FIF0 208 aa8.08□□□□□ -1.12
SPG11-216ENST00000559347 Q6ZWC4 215 aa8.08□□□□□ -1.12
SPG11-216ENST00000559347 GLMPQ8WWB7 406 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms