RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 ACSM6Q6P461 480 aa11.34□□□□□ -0.59
SNRPA1-207ENST00000559309 TREML4Q6UXN2 200 aa11.34□□□□□ -0.59
SNRPA1-207ENST00000559309 STX12Q86Y82 276 aa11.34□□□□□ -0.59
SNRPA1-207ENST00000559309 LINC00482Q8N8I6 264 aa11.34□□□□□ -0.59
SNRPA1-207ENST00000559309 OR4F17Q8NGA8 305 aa11.34□□□□□ -0.59
SNRPA1-207ENST00000559309 DCUN1D4Q92564 292 aa11.34□□□□□ -0.59
SNRPA1-207ENST00000559309 NPIPB3Q92617 1050 aa11.34□□□□□ -0.59
SNRPA1-207ENST00000559309 OR4F4Q96R69 305 aa11.34□□□□□ -0.59
SNRPA1-207ENST00000559309 TRAV30A0A087WSZ9 112 aa11.33□□□□□ -0.6
SNRPA1-207ENST00000559309 ANKRD34BA5PLL1 514 aa11.33□□□□□ -0.6
SNRPA1-207ENST00000559309 NUDT19A8MXV4 375 aa11.33□□□□□ -0.6
SNRPA1-207ENST00000559309 SMLR1H3BR10 107 aa11.33□□□□□ -0.6
SNRPA1-207ENST00000559309 GGCTO75223 188 aaKnown RBP11.33□□□□□ -0.6
SNRPA1-207ENST00000559309 TSPAN15O95858 294 aa11.33□□□□□ -0.6
SNRPA1-207ENST00000559309 HOXD3P31249 432 aaPredicted RBP11.33□□□□□ -0.6
SNRPA1-207ENST00000559309 ARL3P36405 182 aa11.33□□□□□ -0.6
SNRPA1-207ENST00000559309 YPEL3P61236 119 aaPredicted RBP11.33□□□□□ -0.6
SNRPA1-207ENST00000559309 CD300CQ08708 224 aa11.33□□□□□ -0.6
SNRPA1-207ENST00000559309 AKAP14Q86UN6 197 aa11.33□□□□□ -0.6
SNRPA1-207ENST00000559309 OR1S2Q8NGQ3 325 aa11.33□□□□□ -0.6
SNRPA1-207ENST00000559309 NPVFQ9HCQ7 196 aa11.33□□□□□ -0.6
SNRPA1-207ENST00000559309 A8MWP6 167 aa11.32□□□□□ -0.6
SNRPA1-207ENST00000559309 M0QZ24 198 aa11.32□□□□□ -0.6
SNRPA1-207ENST00000559309 LGALS9O00182 355 aa11.32□□□□□ -0.6
SNRPA1-207ENST00000559309 C1QBP02746 253 aa11.32□□□□□ -0.6
SNRPA1-207ENST00000559309 ZP3P21754 424 aa11.32□□□□□ -0.6
SNRPA1-207ENST00000559309 HBG1P69891 147 aa11.32□□□□□ -0.6
SNRPA1-207ENST00000559309 HBG2P69892 147 aa11.32□□□□□ -0.6
SNRPA1-207ENST00000559309 LCE2DQ5TA82 110 aaPredicted RBP11.32□□□□□ -0.6
SNRPA1-207ENST00000559309 REC114Q7Z4M0 266 aa11.32□□□□□ -0.6
SNRPA1-207ENST00000559309 ZNF546Q86UE3 836 aa11.32□□□□□ -0.6
SNRPA1-207ENST00000559309 OR5C1Q8NGR4 320 aa11.32□□□□□ -0.6
SNRPA1-207ENST00000559309 SLC35E1Q96K37 410 aa11.32□□□□□ -0.6
SNRPA1-207ENST00000559309 DUX3Q96PT4 197 aa11.32□□□□□ -0.6
SNRPA1-207ENST00000559309 TRGV9Q99603 122 aa11.32□□□□□ -0.6
SNRPA1-207ENST00000559309 ZFAND3Q9H8U3 227 aa11.32□□□□□ -0.6
SNRPA1-207ENST00000559309 WDR83OSQ9Y284 106 aa11.32□□□□□ -0.6
SNRPA1-207ENST00000559309 NDUFA4O00483 81 aa11.31□□□□□ -0.6
SNRPA1-207ENST00000559309 GNG7O60262 68 aa11.31□□□□□ -0.6
SNRPA1-207ENST00000559309 OR2C1O95371 312 aa11.31□□□□□ -0.6
SNRPA1-207ENST00000559309 OR10J1P30954 320 aa11.31□□□□□ -0.6
SNRPA1-207ENST00000559309 ZNF345Q14585 488 aa11.31□□□□□ -0.6
SNRPA1-207ENST00000559309 Q56UQ5 140 aa11.31□□□□□ -0.6
SNRPA1-207ENST00000559309 PRR31Q5SQ13 230 aa11.31□□□□□ -0.6
SNRPA1-207ENST00000559309 IL34Q6ZMJ4 242 aa11.31□□□□□ -0.6
SNRPA1-207ENST00000559309 TMEM217Q8N7C4 229 aa11.31□□□□□ -0.6
SNRPA1-207ENST00000559309 DLX4Q92988 240 aaPredicted RBP11.31□□□□□ -0.6
SNRPA1-207ENST00000559309 ACY3Q96HD9 319 aa11.31□□□□□ -0.6
SNRPA1-207ENST00000559309 TMEM147Q9BVK8 224 aa11.31□□□□□ -0.6
SNRPA1-207ENST00000559309 PARD6GQ9BYG4 376 aaPredicted RBP11.31□□□□□ -0.6
SNRPA1-207ENST00000559309 PAIP2BQ9ULR5 123 aaKnown RBP11.31□□□□□ -0.6
SNRPA1-207ENST00000559309 WNK1Q9H4A3 2382 aa11.31□□□□□ -0.6
SNRPA1-207ENST00000559309 DNAH3Q8TD57 4116 aa11.3□□□□□ -0.6
SNRPA1-207ENST00000559309 NUPL2O15504 423 aaKnown RBP11.3□□□□□ -0.6
SNRPA1-207ENST00000559309 SLURP1P55000 103 aa11.3□□□□□ -0.6
SNRPA1-207ENST00000559309 TIGITQ495A1 244 aa11.3□□□□□ -0.6
SNRPA1-207ENST00000559309 ZNF600Q6ZNG1 722 aa11.3□□□□□ -0.6
SNRPA1-207ENST00000559309 C1QL4Q86Z23 238 aa11.3□□□□□ -0.6
SNRPA1-207ENST00000559309 TMEM190Q8WZ59 177 aa11.3□□□□□ -0.6
SNRPA1-207ENST00000559309 WFDC1Q9HC57 220 aa11.3□□□□□ -0.6
SNRPA1-207ENST00000559309 UQCC1Q9NVA1 299 aa11.3□□□□□ -0.6
SNRPA1-207ENST00000559309 FXYD6-FXYD2A0A087WZ82 144 aa11.29□□□□□ -0.6
SNRPA1-207ENST00000559309 TOMM40O96008 361 aa11.29□□□□□ -0.6
SNRPA1-207ENST00000559309 ELLP55199 621 aaPredicted RBP11.29□□□□□ -0.6
SNRPA1-207ENST00000559309 ZNF90Q03938 601 aa11.29□□□□□ -0.6
SNRPA1-207ENST00000559309 TEPPQ6URK8 271 aa11.29□□□□□ -0.6
SNRPA1-207ENST00000559309 UNQ9165/PRO28630Q6UXU0 137 aa11.29□□□□□ -0.6
SNRPA1-207ENST00000559309 TMEM182Q6ZP80 229 aaPredicted RBP11.29□□□□□ -0.6
SNRPA1-207ENST00000559309 KCNRGQ8N5I3 272 aa11.29□□□□□ -0.6
SNRPA1-207ENST00000559309 UBAC2Q8NBM4 344 aa11.29□□□□□ -0.6
SNRPA1-207ENST00000559309 SIGLEC8Q9NYZ4 499 aa11.29□□□□□ -0.6
SNRPA1-207ENST00000559309 WI2-2373I1.2A0A1W2PRP0 233 aa11.28□□□□□ -0.6
SNRPA1-207ENST00000559309 K7EMT4 169 aa11.28□□□□□ -0.6
SNRPA1-207ENST00000559309 C8orf88P0DMB2 117 aa11.28□□□□□ -0.6
SNRPA1-207ENST00000559309 CXCL2P19875 107 aa11.28□□□□□ -0.6
SNRPA1-207ENST00000559309 PLP1P60201 277 aa11.28□□□□□ -0.6
SNRPA1-207ENST00000559309 RELQ04864 619 aaPredicted RBP11.28□□□□□ -0.6
SNRPA1-207ENST00000559309 OR2F1Q13607 317 aa11.28□□□□□ -0.6
SNRPA1-207ENST00000559309 RPEL1Q2QD12 228 aa11.28□□□□□ -0.6
SNRPA1-207ENST00000559309 TOMM20LQ6UXN7 152 aa11.28□□□□□ -0.6
SNRPA1-207ENST00000559309 ADAMTSL5Q6ZMM2 481 aa11.28□□□□□ -0.6
SNRPA1-207ENST00000559309 DPF1Q92782 380 aa11.28□□□□□ -0.6
SNRPA1-207ENST00000559309 MGST2Q99735 147 aa11.28□□□□□ -0.6
SNRPA1-207ENST00000559309 ATP5SQ99766 215 aa11.28□□□□□ -0.6
SNRPA1-207ENST00000559309 ZC4H2Q9NQZ6 224 aa11.28□□□□□ -0.6
SNRPA1-207ENST00000559309 FBXL17Q9UF56 701 aa11.28□□□□□ -0.6
SNRPA1-207ENST00000559309 SLC45A2Q9UMX9 530 aa11.28□□□□□ -0.6
SNRPA1-207ENST00000559309 TGP01266 2768 aa11.28□□□□□ -0.6
SNRPA1-207ENST00000559309 TMEM213A2RRL7 107 aa11.27□□□□□ -0.61
SNRPA1-207ENST00000559309 ARPC5O15511 151 aa11.27□□□□□ -0.61
SNRPA1-207ENST00000559309 MPDU1O75352 247 aa11.27□□□□□ -0.61
SNRPA1-207ENST00000559309 PSG1P11464 419 aa11.27□□□□□ -0.61
SNRPA1-207ENST00000559309 PRR20EP86478 221 aa11.27□□□□□ -0.61
SNRPA1-207ENST00000559309 PRR20CP86479 221 aa11.27□□□□□ -0.61
SNRPA1-207ENST00000559309 PRR20DP86480 221 aa11.27□□□□□ -0.61
SNRPA1-207ENST00000559309 PRR20BP86481 221 aa11.27□□□□□ -0.61
SNRPA1-207ENST00000559309 PRR20AP86496 221 aa11.27□□□□□ -0.61
SNRPA1-207ENST00000559309 AKR1C1Q04828 323 aa11.27□□□□□ -0.61
SNRPA1-207ENST00000559309 LILRB2Q8N423 598 aa11.27□□□□□ -0.61
SNRPA1-207ENST00000559309 INO80EQ8NBZ0 244 aaPredicted RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms