RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 DENND4BO75064 1496 aaPredicted RBP1.11□□□□□ -2.23
GABPB1-209ENST00000559100 CUL9Q8IWT3 2517 aa1.11□□□□□ -2.23
GABPB1-209ENST00000559100 SLX4Q8IY92 1834 aa1.1□□□□□ -2.23
GABPB1-209ENST00000559100 TOPBP1Q92547 1522 aa1.1□□□□□ -2.23
GABPB1-209ENST00000559100 KIF24Q5T7B8 1368 aa1.1□□□□□ -2.23
GABPB1-209ENST00000559100 NYNRINQ9P2P1 1898 aaKnown RBP1.1□□□□□ -2.23
GABPB1-209ENST00000559100 RIC1Q4ADV7 1423 aa1.1□□□□□ -2.23
GABPB1-209ENST00000559100 TRGV10A0A0A0MS01 117 aa1.1□□□□□ -2.23
GABPB1-209ENST00000559100 GNG14A0A1W2PPG7 69 aa1.1□□□□□ -2.23
GABPB1-209ENST00000559100 FUOMA2VDF0 154 aa1.1□□□□□ -2.23
GABPB1-209ENST00000559100 MAP1LC3B2A6NCE7 125 aa1.1□□□□□ -2.23
GABPB1-209ENST00000559100 ZNF705FA8MVS1 300 aaPredicted RBP1.1□□□□□ -2.23
GABPB1-209ENST00000559100 GPR31O00270 319 aa1.1□□□□□ -2.23
GABPB1-209ENST00000559100 MFSD11O43934 449 aa1.1□□□□□ -2.23
GABPB1-209ENST00000559100 GGCTO75223 188 aaKnown RBP1.1□□□□□ -2.23
GABPB1-209ENST00000559100 ZNF737O75373 536 aa1.1□□□□□ -2.23
GABPB1-209ENST00000559100 NAPSAO96009 420 aa1.1□□□□□ -2.23
GABPB1-209ENST00000559100 IFNA14P01570 189 aa1.1□□□□□ -2.23
GABPB1-209ENST00000559100 CRPP02741 224 aa1.1□□□□□ -2.23
GABPB1-209ENST00000559100 GPX1P07203 203 aa1.1□□□□□ -2.23
GABPB1-209ENST00000559100 MGST1P10620 155 aaKnown RBP1.1□□□□□ -2.23
GABPB1-209ENST00000559100 FKBP2P26885 142 aaKnown RBP1.1□□□□□ -2.23
GABPB1-209ENST00000559100 FUSP35637 526 aaKnown RBP eCLIP1.1□□□□□ -2.23
GABPB1-209ENST00000559100 GLRXP35754 106 aa1.1□□□□□ -2.23
GABPB1-209ENST00000559100 UBE2BP63146 152 aa1.1□□□□□ -2.23
GABPB1-209ENST00000559100 MYL5Q02045 173 aa1.1□□□□□ -2.23
GABPB1-209ENST00000559100 ELOBQ15370 118 aa1.1□□□□□ -2.23
GABPB1-209ENST00000559100 DCUN1D2Q6PH85 259 aa1.1□□□□□ -2.23
GABPB1-209ENST00000559100 PP632Q6XCG6 107 aa1.1□□□□□ -2.23
GABPB1-209ENST00000559100 DEFB128Q7Z7B8 93 aa1.1□□□□□ -2.23
GABPB1-209ENST00000559100 AKAP14Q86UN6 197 aa1.1□□□□□ -2.23
GABPB1-209ENST00000559100 RPS19BP1Q86WX3 136 aaKnown RBP1.1□□□□□ -2.23
GABPB1-209ENST00000559100 C10orf126Q8N4M7 172 aa1.1□□□□□ -2.23
GABPB1-209ENST00000559100 OR4D11Q8NGI4 311 aa1.1□□□□□ -2.23
GABPB1-209ENST00000559100 OR2T10Q8NGZ9 312 aa1.1□□□□□ -2.23
GABPB1-209ENST00000559100 PPTC7Q8NI37 304 aa1.1□□□□□ -2.23
GABPB1-209ENST00000559100 GRPEL2Q8TAA5 225 aa1.1□□□□□ -2.23
GABPB1-209ENST00000559100 AQP3Q92482 292 aa1.1□□□□□ -2.23
GABPB1-209ENST00000559100 SLAMF6Q96DU3 332 aa1.1□□□□□ -2.23
GABPB1-209ENST00000559100 YPEL2Q96QA6 119 aa1.1□□□□□ -2.23
GABPB1-209ENST00000559100 SLC50A1Q9BRV3 221 aa1.1□□□□□ -2.23
GABPB1-209ENST00000559100 MAP1LC3BQ9GZQ8 125 aa1.1□□□□□ -2.23
GABPB1-209ENST00000559100 PBOV1Q9GZY1 135 aa1.1□□□□□ -2.23
GABPB1-209ENST00000559100 CXCL16Q9H2A7 254 aa1.1□□□□□ -2.23
GABPB1-209ENST00000559100 TMEM106BQ9NUM4 274 aa1.1□□□□□ -2.23
GABPB1-209ENST00000559100 TAS2R4Q9NYW5 299 aa1.1□□□□□ -2.23
GABPB1-209ENST00000559100 SLC35A3Q9Y2D2 325 aa1.1□□□□□ -2.23
GABPB1-209ENST00000559100 MAST2Q6P0Q8 1798 aa1.1□□□□□ -2.23
GABPB1-209ENST00000559100 NEO1Q92859 1461 aa1.1□□□□□ -2.23
GABPB1-209ENST00000559100 TONSLQ96HA7 1378 aa1.09□□□□□ -2.23
GABPB1-209ENST00000559100 IGKV1D-42A0A075B6H8 117 aa1.09□□□□□ -2.23
GABPB1-209ENST00000559100 MEIKINA0A087WXM9 373 aa1.09□□□□□ -2.23
GABPB1-209ENST00000559100 TRAV1-1A0A0B4J248 108 aa1.09□□□□□ -2.23
GABPB1-209ENST00000559100 C7orf71A4D174 169 aa1.09□□□□□ -2.23
GABPB1-209ENST00000559100 TMEM212A6NML5 194 aa1.09□□□□□ -2.23
GABPB1-209ENST00000559100 H3BQV1 296 aa1.09□□□□□ -2.23
GABPB1-209ENST00000559100 C19orf84I3L1E1 186 aa1.09□□□□□ -2.23
GABPB1-209ENST00000559100 NDUFB3O43676 98 aa1.09□□□□□ -2.23
GABPB1-209ENST00000559100 OR2T1O43869 369 aa1.09□□□□□ -2.23
GABPB1-209ENST00000559100 SHBGP04278 402 aa1.09□□□□□ -2.23
GABPB1-209ENST00000559100 COX6A1P12074 109 aa1.09□□□□□ -2.23
GABPB1-209ENST00000559100 OGNP20774 298 aaKnown RBP1.09□□□□□ -2.23
GABPB1-209ENST00000559100 S100GP29377 79 aa1.09□□□□□ -2.23
GABPB1-209ENST00000559100 NNATQ16517 81 aa1.09□□□□□ -2.23
GABPB1-209ENST00000559100 RNASE10Q5GAN6 216 aaKnown RBP1.09□□□□□ -2.23
GABPB1-209ENST00000559100 SPANXN5Q5MJ07 72 aa1.09□□□□□ -2.23
GABPB1-209ENST00000559100 BRMS1LQ5PSV4 323 aa1.09□□□□□ -2.23
GABPB1-209ENST00000559100 EIF5AL1Q6IS14 154 aaKnown RBP1.09□□□□□ -2.23
GABPB1-209ENST00000559100 SLC30A7Q8NEW0 376 aa1.09□□□□□ -2.23
GABPB1-209ENST00000559100 OR13D1Q8NGV5 346 aa1.09□□□□□ -2.23
GABPB1-209ENST00000559100 PRADC1Q9BSG0 188 aa1.09□□□□□ -2.23
GABPB1-209ENST00000559100 C6orf62Q9GZU0 229 aaPredicted RBP1.09□□□□□ -2.23
GABPB1-209ENST00000559100 MIXL1Q9H2W2 232 aa1.09□□□□□ -2.23
GABPB1-209ENST00000559100 RNF122Q9H9V4 155 aa1.09□□□□□ -2.23
GABPB1-209ENST00000559100 SCAF11Q99590 1463 aaKnown RBP1.09□□□□□ -2.24
GABPB1-209ENST00000559100 WDR90Q96KV7 1748 aa1.09□□□□□ -2.24
GABPB1-209ENST00000559100 SYNMO15061 1565 aa1.08□□□□□ -2.24
GABPB1-209ENST00000559100 SCN9AQ15858 1988 aa1.08□□□□□ -2.24
GABPB1-209ENST00000559100 UHRF1BP1Q6BDS2 1440 aa1.08□□□□□ -2.24
GABPB1-209ENST00000559100 YTHDC2Q9H6S0 1430 aaKnown RBP1.08□□□□□ -2.24
GABPB1-209ENST00000559100 CCDC88AQ3V6T2 1871 aa1.08□□□□□ -2.24
GABPB1-209ENST00000559100 TRAV14DV4A0A0A6YYC5 116 aa1.08□□□□□ -2.24
GABPB1-209ENST00000559100 TRAV3A0A0B4J244 114 aa1.08□□□□□ -2.24
GABPB1-209ENST00000559100 IGKV1-9A0A0C4DH69 117 aa1.08□□□□□ -2.24
GABPB1-209ENST00000559100 IBA57-AS1B1ANH7 110 aa1.08□□□□□ -2.24
GABPB1-209ENST00000559100 TSTD3H0UI37 97 aa1.08□□□□□ -2.24
GABPB1-209ENST00000559100 TMEM256-PLSCR3K7ERE1 68 aa1.08□□□□□ -2.24
GABPB1-209ENST00000559100 PROSCO94903 275 aa1.08□□□□□ -2.24
GABPB1-209ENST00000559100 C1QCP02747 245 aa1.08□□□□□ -2.24
GABPB1-209ENST00000559100 ASAH2BP0C7U1 165 aa1.08□□□□□ -2.24
GABPB1-209ENST00000559100 AKR1C3P42330 323 aa1.08□□□□□ -2.24
GABPB1-209ENST00000559100 TMBIM6P55061 237 aa1.08□□□□□ -2.24
GABPB1-209ENST00000559100 DYNLT1P63172 113 aa1.08□□□□□ -2.24
GABPB1-209ENST00000559100 RHOGP84095 191 aa1.08□□□□□ -2.24
GABPB1-209ENST00000559100 TFAMQ00059 246 aaKnown RBP1.08□□□□□ -2.24
GABPB1-209ENST00000559100 LTC4SQ16873 150 aa1.08□□□□□ -2.24
GABPB1-209ENST00000559100 C22orf39Q6P5X5 142 aa1.08□□□□□ -2.24
GABPB1-209ENST00000559100 SOSTDC1Q6X4U4 206 aa1.08□□□□□ -2.24
GABPB1-209ENST00000559100 Q6ZQT0 140 aa1.08□□□□□ -2.24
GABPB1-209ENST00000559100 COA5Q86WW8 74 aa1.08□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms