RNA–Protein interactions for RNA: ENST00000558970.2

GABPB1-208, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5

Gene GABPB1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-208ENST00000558970 RAP2BP61225 183 aa9.52□□□□□ -0.89
GABPB1-208ENST00000558970 EWSR1Q01844 656 aaKnown RBP eCLIP9.52□□□□□ -0.89
GABPB1-208ENST00000558970 NHLH2Q02577 135 aa9.52□□□□□ -0.89
GABPB1-208ENST00000558970 OR4X1Q8NH49 305 aa9.52□□□□□ -0.89
GABPB1-208ENST00000558970 RCC1LQ96I51 464 aaKnown RBP9.52□□□□□ -0.89
GABPB1-208ENST00000558970 TXN2Q99757 166 aa9.52□□□□□ -0.89
GABPB1-208ENST00000558970 C20orf24Q9BUV8 137 aa9.52□□□□□ -0.89
GABPB1-208ENST00000558970 SMIM3Q9BZL3 60 aa9.52□□□□□ -0.89
GABPB1-208ENST00000558970 UBE2L5PA0A1B0GUS4 154 aa9.51□□□□□ -0.89
GABPB1-208ENST00000558970 IGLL1P15814 213 aa9.51□□□□□ -0.89
GABPB1-208ENST00000558970 GPX4P36969 197 aaPredicted RBP9.51□□□□□ -0.89
GABPB1-208ENST00000558970 P2RY1P47900 373 aa9.51□□□□□ -0.89
GABPB1-208ENST00000558970 SULT1A1P50225 295 aa9.51□□□□□ -0.89
GABPB1-208ENST00000558970 SPSB3Q6PJ21 355 aa9.51□□□□□ -0.89
GABPB1-208ENST00000558970 UNQ9165/PRO28630Q6UXU0 137 aa9.51□□□□□ -0.89
GABPB1-208ENST00000558970 GAR1Q9NY12 217 aaKnown RBP9.51□□□□□ -0.89
GABPB1-208ENST00000558970 PKD1L1Q8TDX9 2849 aa9.5□□□□□ -0.89
GABPB1-208ENST00000558970 SAP30O75446 220 aa9.5□□□□□ -0.89
GABPB1-208ENST00000558970 IGLC1P0CG04 106 aa9.5□□□□□ -0.89
GABPB1-208ENST00000558970 RPL12P30050 165 aaKnown RBP9.5□□□□□ -0.89
GABPB1-208ENST00000558970 FCGR2BP31994 310 aaPredicted RBP9.5□□□□□ -0.89
GABPB1-208ENST00000558970 ZNF90Q03938 601 aa9.5□□□□□ -0.89
GABPB1-208ENST00000558970 OR2F1Q13607 317 aa9.5□□□□□ -0.89
GABPB1-208ENST00000558970 KLF5Q13887 457 aaPredicted RBP9.5□□□□□ -0.89
GABPB1-208ENST00000558970 CLINT1Q14677 625 aa9.5□□□□□ -0.89
GABPB1-208ENST00000558970 FAM106AQ4KMX7 169 aa9.5□□□□□ -0.89
GABPB1-208ENST00000558970 PRR31Q5SQ13 230 aa9.5□□□□□ -0.89
GABPB1-208ENST00000558970 C1QL4Q86Z23 238 aa9.5□□□□□ -0.89
GABPB1-208ENST00000558970 TMEM116Q8NCL8 245 aa9.5□□□□□ -0.89
GABPB1-208ENST00000558970 OR5C1Q8NGR4 320 aa9.5□□□□□ -0.89
GABPB1-208ENST00000558970 CACNG8Q8WXS5 425 aa9.5□□□□□ -0.89
GABPB1-208ENST00000558970 SLC25A31Q9H0C2 315 aa9.5□□□□□ -0.89
GABPB1-208ENST00000558970 PUS1Q9Y606 427 aaKnown RBP eCLIP9.5□□□□□ -0.89
GABPB1-208ENST00000558970 TRRAPQ9Y4A5 3859 aa9.5□□□□□ -0.89
GABPB1-208ENST00000558970 CMYA5Q8N3K9 4069 aa9.49□□□□□ -0.89
GABPB1-208ENST00000558970 IGKV1D-37A0A075B6S9 117 aa9.49□□□□□ -0.89
GABPB1-208ENST00000558970 IGKV1OR2-108A0A075B7D4 117 aa9.49□□□□□ -0.89
GABPB1-208ENST00000558970 IGHV3-49A0A0A0MS15 119 aa9.49□□□□□ -0.89
GABPB1-208ENST00000558970 SEC14L6B5MCN3 397 aa9.49□□□□□ -0.89
GABPB1-208ENST00000558970 SCGB2A1O75556 95 aa9.49□□□□□ -0.89
GABPB1-208ENST00000558970 IGKV1-17P01599 117 aa9.49□□□□□ -0.89
GABPB1-208ENST00000558970 GATA2P23769 480 aaPredicted RBP9.49□□□□□ -0.89
GABPB1-208ENST00000558970 AP2S1P53680 142 aaPredicted RBP9.49□□□□□ -0.89
GABPB1-208ENST00000558970 HBG1P69891 147 aa9.49□□□□□ -0.89
GABPB1-208ENST00000558970 HBG2P69892 147 aa9.49□□□□□ -0.89
GABPB1-208ENST00000558970 DLK1P80370 383 aa9.49□□□□□ -0.89
GABPB1-208ENST00000558970 RELQ04864 619 aaPredicted RBP9.49□□□□□ -0.89
GABPB1-208ENST00000558970 FGL1Q08830 312 aa9.49□□□□□ -0.89
GABPB1-208ENST00000558970 TM4SF20Q53R12 229 aa9.49□□□□□ -0.89
GABPB1-208ENST00000558970 OR9G4Q8NGQ1 327 aa9.49□□□□□ -0.89
GABPB1-208ENST00000558970 OR1S2Q8NGQ3 325 aa9.49□□□□□ -0.89
GABPB1-208ENST00000558970 TGP01266 2768 aa9.48□□□□□ -0.89
GABPB1-208ENST00000558970 IGHV3OR16-13A0A075B7E8 117 aa9.48□□□□□ -0.89
GABPB1-208ENST00000558970 TRAV30A0A087WSZ9 112 aa9.48□□□□□ -0.89
GABPB1-208ENST00000558970 IGHV3-74A0A0B4J1X5 117 aa9.48□□□□□ -0.89
GABPB1-208ENST00000558970 G3V3Q6 166 aa9.48□□□□□ -0.89
GABPB1-208ENST00000558970 NDUFA4O00483 81 aa9.48□□□□□ -0.89
GABPB1-208ENST00000558970 LYL1P12980 280 aa9.48□□□□□ -0.89
GABPB1-208ENST00000558970 BAXQ07812 192 aa9.48□□□□□ -0.89
GABPB1-208ENST00000558970 OXLD1Q5BKU9 147 aa9.48□□□□□ -0.89
GABPB1-208ENST00000558970 ZNF600Q6ZNG1 722 aa9.48□□□□□ -0.89
GABPB1-208ENST00000558970 ZNF546Q86UE3 836 aa9.48□□□□□ -0.89
GABPB1-208ENST00000558970 GPHB5Q86YW7 130 aa9.48□□□□□ -0.89
GABPB1-208ENST00000558970 ASB13Q8WXK3 278 aa9.48□□□□□ -0.89
GABPB1-208ENST00000558970 TMEM190Q8WZ59 177 aa9.48□□□□□ -0.89
GABPB1-208ENST00000558970 ZNF414Q96IQ9 312 aa9.48□□□□□ -0.89
GABPB1-208ENST00000558970 PBDC1Q9BVG4 233 aa9.48□□□□□ -0.89
GABPB1-208ENST00000558970 UQCC1Q9NVA1 299 aa9.48□□□□□ -0.89
GABPB1-208ENST00000558970 PEMTQ9UBM1 199 aa9.48□□□□□ -0.89
GABPB1-208ENST00000558970 HSPB11Q9Y547 144 aa9.48□□□□□ -0.89
GABPB1-208ENST00000558970 IGHV3-66A0A0C4DH42 116 aa9.47□□□□□ -0.89
GABPB1-208ENST00000558970 ARPC5O15511 151 aa9.47□□□□□ -0.89
GABPB1-208ENST00000558970 IL4P05112 153 aa9.47□□□□□ -0.89
GABPB1-208ENST00000558970 PSG1P11464 419 aa9.47□□□□□ -0.89
GABPB1-208ENST00000558970 S100A11P31949 105 aa9.47□□□□□ -0.89
GABPB1-208ENST00000558970 NUP62P37198 522 aaPredicted RBP9.47□□□□□ -0.89
GABPB1-208ENST00000558970 LYZP61626 148 aa9.47□□□□□ -0.89
GABPB1-208ENST00000558970 CD300CQ08708 224 aa9.47□□□□□ -0.89
GABPB1-208ENST00000558970 TOMM20LQ6UXN7 152 aa9.47□□□□□ -0.89
GABPB1-208ENST00000558970 AKAP14Q86UN6 197 aa9.47□□□□□ -0.89
GABPB1-208ENST00000558970 ST6GAL2Q96JF0 529 aa9.47□□□□□ -0.89
GABPB1-208ENST00000558970 ATP6V0BQ99437 205 aa9.47□□□□□ -0.89
GABPB1-208ENST00000558970 TMEM147Q9BVK8 224 aa9.47□□□□□ -0.89
GABPB1-208ENST00000558970 ELOVL1Q9BW60 279 aa9.47□□□□□ -0.89
GABPB1-208ENST00000558970 ZFAND3Q9H8U3 227 aa9.47□□□□□ -0.89
GABPB1-208ENST00000558970 NPVFQ9HCQ7 196 aa9.47□□□□□ -0.89
GABPB1-208ENST00000558970 C2orf70A6NJV1 201 aa9.46□□□□□ -0.9
GABPB1-208ENST00000558970 G3V4G9 280 aa9.46□□□□□ -0.9
GABPB1-208ENST00000558970 TOMM40O96008 361 aa9.46□□□□□ -0.9
GABPB1-208ENST00000558970 RD3LP0DJH9 198 aa9.46□□□□□ -0.9
GABPB1-208ENST00000558970 FGF7P21781 194 aa9.46□□□□□ -0.9
GABPB1-208ENST00000558970 TEPPQ6URK8 271 aa9.46□□□□□ -0.9
GABPB1-208ENST00000558970 TMEM182Q6ZP80 229 aaPredicted RBP9.46□□□□□ -0.9
GABPB1-208ENST00000558970 REC114Q7Z4M0 266 aa9.46□□□□□ -0.9
GABPB1-208ENST00000558970 TMEM144Q7Z5S9 345 aa9.46□□□□□ -0.9
GABPB1-208ENST00000558970 THAP8Q8NA92 274 aa9.46□□□□□ -0.9
GABPB1-208ENST00000558970 INO80EQ8NBZ0 244 aaPredicted RBP9.46□□□□□ -0.9
GABPB1-208ENST00000558970 OR51G1Q8NGK1 321 aa9.46□□□□□ -0.9
GABPB1-208ENST00000558970 Q8WTZ3 238 aa9.46□□□□□ -0.9
GABPB1-208ENST00000558970 DOK5Q9P104 306 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms