RNA–Protein interactions for RNA: ENST00000558880.1

TRAF3-206, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-206ENST00000558880 NECAP1Q8NC96 275 aa5.55□□□□□ -1.52
TRAF3-206ENST00000558880 CLRN3Q8NCR9 226 aa5.55□□□□□ -1.52
TRAF3-206ENST00000558880 OR2T35Q8NGX2 323 aa5.55□□□□□ -1.52
TRAF3-206ENST00000558880 UBE2E2Q96LR5 201 aa5.55□□□□□ -1.52
TRAF3-206ENST00000558880 PDCD10Q9BUL8 212 aa5.55□□□□□ -1.52
TRAF3-206ENST00000558880 KRTAP17-1Q9BYP8 105 aa5.55□□□□□ -1.52
TRAF3-206ENST00000558880 TMPRSS5Q9H3S3 457 aa5.55□□□□□ -1.52
TRAF3-206ENST00000558880 SLA2Q9H6Q3 261 aa5.55□□□□□ -1.52
TRAF3-206ENST00000558880 PSENENQ9NZ42 101 aa5.55□□□□□ -1.52
TRAF3-206ENST00000558880 TNFSF18Q9UNG2 199 aa5.55□□□□□ -1.52
TRAF3-206ENST00000558880 WNK1Q9H4A3 2382 aa5.54□□□□□ -1.52
TRAF3-206ENST00000558880 IGHV4OR15-8A0A075B7B6 117 aa5.54□□□□□ -1.52
TRAF3-206ENST00000558880 A0A087WW49 117 aa5.54□□□□□ -1.52
TRAF3-206ENST00000558880 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.54□□□□□ -1.52
TRAF3-206ENST00000558880 FAM223BA6NKX1 122 aa5.54□□□□□ -1.52
TRAF3-206ENST00000558880 E5RGE8 158 aa5.54□□□□□ -1.52
TRAF3-206ENST00000558880 BMPR1BO00238 502 aa5.54□□□□□ -1.52
TRAF3-206ENST00000558880 MED6O75586 246 aa5.54□□□□□ -1.52
TRAF3-206ENST00000558880 CST7O76096 145 aa5.54□□□□□ -1.52
TRAF3-206ENST00000558880 LY86O95711 162 aa5.54□□□□□ -1.52
TRAF3-206ENST00000558880 IGKV1-17P01599 117 aa5.54□□□□□ -1.52
TRAF3-206ENST00000558880 CTSGP08311 255 aa5.54□□□□□ -1.52
TRAF3-206ENST00000558880 IGLC1P0CG04 106 aa5.54□□□□□ -1.52
TRAF3-206ENST00000558880 CXCL2P19875 107 aa5.54□□□□□ -1.52
TRAF3-206ENST00000558880 ATP5IP56385 69 aaPredicted RBP5.54□□□□□ -1.52
TRAF3-206ENST00000558880 TPPP2P59282 170 aa5.54□□□□□ -1.52
TRAF3-206ENST00000558880 EWSR1Q01844 656 aaKnown RBP eCLIP5.54□□□□□ -1.52
TRAF3-206ENST00000558880 VWC2Q2TAL6 325 aa5.54□□□□□ -1.52
TRAF3-206ENST00000558880 DEFB136Q30KP8 78 aa5.54□□□□□ -1.52
TRAF3-206ENST00000558880 GAGE13Q4V321 117 aa5.54□□□□□ -1.52
TRAF3-206ENST00000558880 LAMTOR1Q6IAA8 161 aa5.54□□□□□ -1.52
TRAF3-206ENST00000558880 TMEM65Q6PI78 240 aa5.54□□□□□ -1.52
TRAF3-206ENST00000558880 FAM223AQ8IWN6 122 aa5.54□□□□□ -1.52
TRAF3-206ENST00000558880 TMEM116Q8NCL8 245 aa5.54□□□□□ -1.52
TRAF3-206ENST00000558880 RNASEH2CQ8TDP1 164 aaKnown RBP5.54□□□□□ -1.52
TRAF3-206ENST00000558880 VN1R17PQ8TDU5 208 aa5.54□□□□□ -1.52
TRAF3-206ENST00000558880 ASB13Q8WXK3 278 aa5.54□□□□□ -1.52
TRAF3-206ENST00000558880 RAX2Q96IS3 184 aa5.54□□□□□ -1.52
TRAF3-206ENST00000558880 AQP10Q96PS8 301 aa5.54□□□□□ -1.52
TRAF3-206ENST00000558880 DUX3Q96PT4 197 aa5.54□□□□□ -1.52
TRAF3-206ENST00000558880 CIB3Q96Q77 187 aaPredicted RBP5.54□□□□□ -1.52
TRAF3-206ENST00000558880 OR5B12Q96R08 314 aa5.54□□□□□ -1.52
TRAF3-206ENST00000558880 CHRDL1Q9BU40 450 aa5.54□□□□□ -1.52
TRAF3-206ENST00000558880 GON7Q9BXV9 100 aa5.54□□□□□ -1.52
TRAF3-206ENST00000558880 HIPK2Q9H2X6 1198 aa5.54□□□□□ -1.52
TRAF3-206ENST00000558880 CYTL1Q9NRR1 136 aa5.54□□□□□ -1.52
TRAF3-206ENST00000558880 CACFD1Q9UGQ2 172 aa5.54□□□□□ -1.52
TRAF3-206ENST00000558880 LSM4Q9Y4Z0 139 aaKnown RBP5.54□□□□□ -1.52
TRAF3-206ENST00000558880 KMT2CQ8NEZ4 4911 aaKnown RBP5.54□□□□□ -1.52
TRAF3-206ENST00000558880 RYR3Q15413 4870 aa5.53□□□□□ -1.52
TRAF3-206ENST00000558880 TCRBV4S1A1TA0A5B7 111 aa5.53□□□□□ -1.52
TRAF3-206ENST00000558880 IFNA10P01566 189 aa5.53□□□□□ -1.52
TRAF3-206ENST00000558880 LGALS1P09382 135 aaKnown RBP5.53□□□□□ -1.52
TRAF3-206ENST00000558880 HIST1H1BP16401 226 aaKnown RBP5.53□□□□□ -1.52
TRAF3-206ENST00000558880 EDN2P20800 178 aa5.53□□□□□ -1.52
TRAF3-206ENST00000558880 SNCAP37840 140 aa5.53□□□□□ -1.52
TRAF3-206ENST00000558880 SLC35B1P78383 322 aa5.53□□□□□ -1.52
TRAF3-206ENST00000558880 EXOSC2Q13868 293 aaKnown RBP5.53□□□□□ -1.52
TRAF3-206ENST00000558880 IL34Q6ZMJ4 242 aa5.53□□□□□ -1.52
TRAF3-206ENST00000558880 ADAMTSL5Q6ZMM2 481 aa5.53□□□□□ -1.52
TRAF3-206ENST00000558880 ACOT7LQ6ZUV0 252 aa5.53□□□□□ -1.52
TRAF3-206ENST00000558880 SLC16A13Q7RTY0 426 aa5.53□□□□□ -1.52
TRAF3-206ENST00000558880 NDUFA11Q86Y39 141 aa5.53□□□□□ -1.52
TRAF3-206ENST00000558880 Q8N1X5 172 aa5.53□□□□□ -1.52
TRAF3-206ENST00000558880 THAP8Q8NA92 274 aa5.53□□□□□ -1.52
TRAF3-206ENST00000558880 OR4X2Q8NGF9 303 aa5.53□□□□□ -1.52
TRAF3-206ENST00000558880 OR1L6Q8NGR2 347 aa5.53□□□□□ -1.52
TRAF3-206ENST00000558880 OR4X1Q8NH49 305 aa5.53□□□□□ -1.52
TRAF3-206ENST00000558880 IL17DQ8TAD2 202 aa5.53□□□□□ -1.52
TRAF3-206ENST00000558880 C4orf3Q8WVX3 66 aa5.53□□□□□ -1.52
TRAF3-206ENST00000558880 USMG5Q96IX5 58 aa5.53□□□□□ -1.52
TRAF3-206ENST00000558880 ZFP57Q9NU63 452 aa5.53□□□□□ -1.52
TRAF3-206ENST00000558880 C21orf62Q9NYP8 219 aa5.53□□□□□ -1.52
TRAF3-206ENST00000558880 STRAPQ9Y3F4 350 aaKnown RBP5.53□□□□□ -1.52
TRAF3-206ENST00000558880 TSSC4Q9Y5U2 329 aaPredicted RBP5.53□□□□□ -1.52
TRAF3-206ENST00000558880 RFNGQ9Y644 331 aa5.53□□□□□ -1.52
TRAF3-206ENST00000558880 HMSDA8MTL9 139 aa5.52□□□□□ -1.53
TRAF3-206ENST00000558880 PPP5D1E7EU14 171 aa5.52□□□□□ -1.53
TRAF3-206ENST00000558880 CLN5O75503 358 aa5.52□□□□□ -1.53
TRAF3-206ENST00000558880 C1QBP02746 253 aa5.52□□□□□ -1.53
TRAF3-206ENST00000558880 CLEC3BP05452 202 aa5.52□□□□□ -1.53
TRAF3-206ENST00000558880 DEFA4P12838 97 aa5.52□□□□□ -1.53
TRAF3-206ENST00000558880 RPL12P30050 165 aaKnown RBP5.52□□□□□ -1.53
TRAF3-206ENST00000558880 GPX4P36969 197 aaPredicted RBP5.52□□□□□ -1.53
TRAF3-206ENST00000558880 SULT1A1P50225 295 aa5.52□□□□□ -1.53
TRAF3-206ENST00000558880 CAV2P51636 162 aa5.52□□□□□ -1.53
TRAF3-206ENST00000558880 RND2P52198 227 aa5.52□□□□□ -1.53
TRAF3-206ENST00000558880 DLK1P80370 383 aa5.52□□□□□ -1.53
TRAF3-206ENST00000558880 ATP5G2Q06055 141 aa5.52□□□□□ -1.53
TRAF3-206ENST00000558880 LGALSLQ3ZCW2 172 aaPredicted RBP5.52□□□□□ -1.53
TRAF3-206ENST00000558880 OR8G2PQ6IF36 304 aa5.52□□□□□ -1.53
TRAF3-206ENST00000558880 CLEC19AQ6UXS0 136 aa5.52□□□□□ -1.53
TRAF3-206ENST00000558880 UNQ9165/PRO28630Q6UXU0 137 aa5.52□□□□□ -1.53
TRAF3-206ENST00000558880 TMEM217Q8N7C4 229 aa5.52□□□□□ -1.53
TRAF3-206ENST00000558880 CACNG8Q8WXS5 425 aa5.52□□□□□ -1.53
TRAF3-206ENST00000558880 NPIPB3Q92617 1050 aa5.52□□□□□ -1.53
TRAF3-206ENST00000558880 PINX1Q96BK5 328 aaKnown RBP5.52□□□□□ -1.53
TRAF3-206ENST00000558880 ATP6V0BQ99437 205 aa5.52□□□□□ -1.53
TRAF3-206ENST00000558880 ENY2Q9NPA8 101 aa5.52□□□□□ -1.53
TRAF3-206ENST00000558880 ZC4H2Q9NQZ6 224 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms