RNA–Protein interactions for RNA: ENST00000558575.1

LINC01220-201, Transcript of long intergenic non-protein coding RNA 1220, humanhuman

TSL 1 (best) BASIC

Gene LINC01220, Length 715 nt, Biotype lincRNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01220-201ENST00000558575 RAB32Q13637 225 aa11.75□□□□□ -0.53
LINC01220-201ENST00000558575 TM4SF20Q53R12 229 aa11.75□□□□□ -0.53
LINC01220-201ENST00000558575 TMEM14EPQ6UXP3 125 aa11.75□□□□□ -0.53
LINC01220-201ENST00000558575 HAPLN4Q86UW8 402 aa11.75□□□□□ -0.53
LINC01220-201ENST00000558575 RAB40CQ96S21 281 aa11.75□□□□□ -0.53
LINC01220-201ENST00000558575 STRAPQ9Y3F4 350 aaKnown RBP11.75□□□□□ -0.53
LINC01220-201ENST00000558575 LSM5Q9Y4Y9 91 aaKnown RBP11.75□□□□□ -0.53
LINC01220-201ENST00000558575 IGHV3OR16-8A0A075B7F1 116 aa11.74□□□□□ -0.53
LINC01220-201ENST00000558575 C2orf70A6NJV1 201 aa11.74□□□□□ -0.53
LINC01220-201ENST00000558575 NDUFA4O00483 81 aa11.74□□□□□ -0.53
LINC01220-201ENST00000558575 NUPL2O15504 423 aaKnown RBP11.74□□□□□ -0.53
LINC01220-201ENST00000558575 SSNA1O43805 119 aa11.74□□□□□ -0.53
LINC01220-201ENST00000558575 LY86O95711 162 aa11.74□□□□□ -0.53
LINC01220-201ENST00000558575 IGLC1P0CG04 106 aa11.74□□□□□ -0.53
LINC01220-201ENST00000558575 SLC25A4P12235 298 aa11.74□□□□□ -0.53
LINC01220-201ENST00000558575 INSL3P51460 131 aa11.74□□□□□ -0.53
LINC01220-201ENST00000558575 TAS2R30P59541 319 aa11.74□□□□□ -0.53
LINC01220-201ENST00000558575 RAB11AP62491 216 aa11.74□□□□□ -0.53
LINC01220-201ENST00000558575 GAMTQ14353 236 aa11.74□□□□□ -0.53
LINC01220-201ENST00000558575 SLC16A13Q7RTY0 426 aa11.74□□□□□ -0.53
LINC01220-201ENST00000558575 TMEM190Q8WZ59 177 aa11.74□□□□□ -0.53
LINC01220-201ENST00000558575 NPIPB3Q92617 1050 aa11.74□□□□□ -0.53
LINC01220-201ENST00000558575 ELOVL1Q9BW60 279 aa11.74□□□□□ -0.53
LINC01220-201ENST00000558575 GPR61Q9BZJ8 451 aa11.74□□□□□ -0.53
LINC01220-201ENST00000558575 SIGLEC8Q9NYZ4 499 aa11.74□□□□□ -0.53
LINC01220-201ENST00000558575 PAIP2BQ9ULR5 123 aaKnown RBP11.74□□□□□ -0.53
LINC01220-201ENST00000558575 A8MWP6 167 aa11.73□□□□□ -0.53
LINC01220-201ENST00000558575 TSC22D2O75157 780 aa11.73□□□□□ -0.53
LINC01220-201ENST00000558575 IGLV1-51P01701 117 aa11.73□□□□□ -0.53
LINC01220-201ENST00000558575 C8orf88P0DMB2 117 aa11.73□□□□□ -0.53
LINC01220-201ENST00000558575 FOLR2P14207 255 aa11.73□□□□□ -0.53
LINC01220-201ENST00000558575 CXCL3P19876 107 aa11.73□□□□□ -0.53
LINC01220-201ENST00000558575 RPP30P78346 268 aaKnown RBP11.73□□□□□ -0.53
LINC01220-201ENST00000558575 ARL16Q0P5N6 197 aa11.73□□□□□ -0.53
LINC01220-201ENST00000558575 TIGITQ495A1 244 aa11.73□□□□□ -0.53
LINC01220-201ENST00000558575 ETFRF1Q6IPR1 90 aa11.73□□□□□ -0.53
LINC01220-201ENST00000558575 TOMM20LQ6UXN7 152 aa11.73□□□□□ -0.53
LINC01220-201ENST00000558575 CACNG8Q8WXS5 425 aa11.73□□□□□ -0.53
LINC01220-201ENST00000558575 ACY3Q96HD9 319 aa11.73□□□□□ -0.53
LINC01220-201ENST00000558575 PEMTQ9UBM1 199 aa11.73□□□□□ -0.53
LINC01220-201ENST00000558575 MGAT4CQ9UBM8 478 aa11.73□□□□□ -0.53
LINC01220-201ENST00000558575 IGKV1D-37A0A075B6S9 117 aa11.72□□□□□ -0.53
LINC01220-201ENST00000558575 H0YIZ8 118 aa11.72□□□□□ -0.53
LINC01220-201ENST00000558575 METTL15P1P0C7V9 234 aa11.72□□□□□ -0.53
LINC01220-201ENST00000558575 CBLN1P23435 193 aa11.72□□□□□ -0.53
LINC01220-201ENST00000558575 NMES1Q9C002 83 aa11.72□□□□□ -0.53
LINC01220-201ENST00000558575 SELENOKQ9Y6D0 94 aa11.72□□□□□ -0.53
LINC01220-201ENST00000558575 STARD9Q9P2P6 4700 aa11.72□□□□□ -0.53
LINC01220-201ENST00000558575 SORL1Q92673 2214 aa11.71□□□□□ -0.53
LINC01220-201ENST00000558575 IGKV1OR2-108A0A075B7D4 117 aa11.71□□□□□ -0.53
LINC01220-201ENST00000558575 FAM24AA6NFZ4 105 aa11.71□□□□□ -0.53
LINC01220-201ENST00000558575 ZNF207O43670 478 aaKnown RBP11.71□□□□□ -0.53
LINC01220-201ENST00000558575 OR10J1P30954 320 aa11.71□□□□□ -0.53
LINC01220-201ENST00000558575 ELLP55199 621 aaPredicted RBP11.71□□□□□ -0.53
LINC01220-201ENST00000558575 RELQ04864 619 aaPredicted RBP11.71□□□□□ -0.53
LINC01220-201ENST00000558575 FCN2Q15485 313 aa11.71□□□□□ -0.53
LINC01220-201ENST00000558575 DEFB114Q30KQ6 69 aa11.71□□□□□ -0.53
LINC01220-201ENST00000558575 ZNF600Q6ZNG1 722 aa11.71□□□□□ -0.53
LINC01220-201ENST00000558575 OR11H7Q8NGC8 314 aa11.71□□□□□ -0.53
LINC01220-201ENST00000558575 C20orf24Q9BUV8 137 aa11.71□□□□□ -0.53
LINC01220-201ENST00000558575 RNF126Q9BV68 326 aa11.71□□□□□ -0.53
LINC01220-201ENST00000558575 ZFAND3Q9H8U3 227 aa11.71□□□□□ -0.53
LINC01220-201ENST00000558575 PUS1Q9Y606 427 aaKnown RBP eCLIP11.71□□□□□ -0.53
LINC01220-201ENST00000558575 TRAV30A0A087WSZ9 112 aa11.7□□□□□ -0.54
LINC01220-201ENST00000558575 IZUMO1RA6ND01 250 aa11.7□□□□□ -0.54
LINC01220-201ENST00000558575 K7EMT4 169 aa11.7□□□□□ -0.54
LINC01220-201ENST00000558575 S100A10P60903 97 aa11.7□□□□□ -0.54
LINC01220-201ENST00000558575 OR8G2PQ6IF36 304 aa11.7□□□□□ -0.54
LINC01220-201ENST00000558575 OR1S2Q8NGQ3 325 aa11.7□□□□□ -0.54
LINC01220-201ENST00000558575 ASCL2Q99929 193 aa11.7□□□□□ -0.54
LINC01220-201ENST00000558575 MLXQ9UH92 298 aa11.7□□□□□ -0.54
LINC01220-201ENST00000558575 UFC1Q9Y3C8 167 aa11.7□□□□□ -0.54
LINC01220-201ENST00000558575 L7N2F9 121 aa11.69□□□□□ -0.54
LINC01220-201ENST00000558575 DEDDO75618 318 aa11.69□□□□□ -0.54
LINC01220-201ENST00000558575 YIF1AO95070 293 aa11.69□□□□□ -0.54
LINC01220-201ENST00000558575 YPEL3P61236 119 aaPredicted RBP11.69□□□□□ -0.54
LINC01220-201ENST00000558575 VAMP2P63027 116 aa11.69□□□□□ -0.54
LINC01220-201ENST00000558575 CYCSP99999 105 aaKnown RBP11.69□□□□□ -0.54
LINC01220-201ENST00000558575 ACOT7LQ6ZUV0 252 aa11.69□□□□□ -0.54
LINC01220-201ENST00000558575 THAP8Q8NA92 274 aa11.69□□□□□ -0.54
LINC01220-201ENST00000558575 PPP1R1CQ8WVI7 109 aa11.69□□□□□ -0.54
LINC01220-201ENST00000558575 SLC35E1Q96K37 410 aa11.69□□□□□ -0.54
LINC01220-201ENST00000558575 OR5AC2Q9NZP5 309 aa11.69□□□□□ -0.54
LINC01220-201ENST00000558575 MRPL27Q9P0M9 148 aaKnown RBP11.69□□□□□ -0.54
LINC01220-201ENST00000558575 HERC2O95714 4834 aa11.68□□□□□ -0.54
LINC01220-201ENST00000558575 IGSF23A1L1A6 192 aa11.68□□□□□ -0.54
LINC01220-201ENST00000558575 APOHP02749 345 aaPredicted RBP11.68□□□□□ -0.54
LINC01220-201ENST00000558575 ZNF90Q03938 601 aa11.68□□□□□ -0.54
LINC01220-201ENST00000558575 CD300EQ496F6 205 aaPredicted RBP11.68□□□□□ -0.54
LINC01220-201ENST00000558575 LRRC37A5PQ49AS3 106 aa11.68□□□□□ -0.54
LINC01220-201ENST00000558575 TMEM252Q8N6L7 170 aa11.68□□□□□ -0.54
LINC01220-201ENST00000558575 MED28Q9H204 178 aa11.68□□□□□ -0.54
LINC01220-201ENST00000558575 DAZ1Q9NQZ3 744 aaKnown RBP11.68□□□□□ -0.54
LINC01220-201ENST00000558575 LYRM2Q9NU23 88 aaPredicted RBP11.68□□□□□ -0.54
LINC01220-201ENST00000558575 SMPXQ9UHP9 88 aa11.68□□□□□ -0.54
LINC01220-201ENST00000558575 IGHV3-49A0A0A0MS15 119 aa11.67□□□□□ -0.54
LINC01220-201ENST00000558575 ZNF785A8K8V0 405 aa11.67□□□□□ -0.54
LINC01220-201ENST00000558575 CST7O76096 145 aa11.67□□□□□ -0.54
LINC01220-201ENST00000558575 SCAF4O95104 1147 aaKnown RBP11.67□□□□□ -0.54
LINC01220-201ENST00000558575 MPC2O95563 127 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms