RNA–Protein interactions for RNA: ENST00000558474.1

VPS18-202, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS18, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-202ENST00000558474 MRPL36Q9P0J6 103 aaKnown RBP11.56□□□□□ -0.56
VPS18-202ENST00000558474 RNF114Q9Y508 228 aa11.56□□□□□ -0.56
VPS18-202ENST00000558474 IGKV1D-37A0A075B6S9 117 aa11.55□□□□□ -0.56
VPS18-202ENST00000558474 IGKV1OR2-108A0A075B7D4 117 aa11.55□□□□□ -0.56
VPS18-202ENST00000558474 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.55□□□□□ -0.56
VPS18-202ENST00000558474 ZFP92A6NM28 416 aa11.55□□□□□ -0.56
VPS18-202ENST00000558474 F8W735 103 aaPredicted RBP11.55□□□□□ -0.56
VPS18-202ENST00000558474 AGPAT2O15120 278 aa11.55□□□□□ -0.56
VPS18-202ENST00000558474 IFNA7P01567 189 aa11.55□□□□□ -0.56
VPS18-202ENST00000558474 IGLC1P0CG04 106 aa11.55□□□□□ -0.56
VPS18-202ENST00000558474 CDX1P47902 265 aaPredicted RBP11.55□□□□□ -0.56
VPS18-202ENST00000558474 FOXL1Q12952 345 aa11.55□□□□□ -0.56
VPS18-202ENST00000558474 KIAA0141Q14154 515 aaPredicted RBP11.55□□□□□ -0.56
VPS18-202ENST00000558474 Q56UQ5 140 aa11.55□□□□□ -0.56
VPS18-202ENST00000558474 CYP2G1PQ6ZSU1 146 aa11.55□□□□□ -0.56
VPS18-202ENST00000558474 ZNF491Q8N8L2 437 aa11.55□□□□□ -0.56
VPS18-202ENST00000558474 HSD17B11Q8NBQ5 300 aa11.55□□□□□ -0.56
VPS18-202ENST00000558474 GGTLC1Q9BX51 225 aa11.55□□□□□ -0.56
VPS18-202ENST00000558474 IGHV3-21A0A0B4J1V1 117 aa11.54□□□□□ -0.56
VPS18-202ENST00000558474 UMAD1C9J7I0 102 aa11.54□□□□□ -0.56
VPS18-202ENST00000558474 NUPL2O15504 423 aaKnown RBP11.54□□□□□ -0.56
VPS18-202ENST00000558474 IGHV3-48P01763 117 aa11.54□□□□□ -0.56
VPS18-202ENST00000558474 MBP02144 154 aa11.54□□□□□ -0.56
VPS18-202ENST00000558474 RAB5CP51148 216 aa11.54□□□□□ -0.56
VPS18-202ENST00000558474 PROK1P58294 105 aa11.54□□□□□ -0.56
VPS18-202ENST00000558474 PXDC1Q5TGL8 231 aa11.54□□□□□ -0.56
VPS18-202ENST00000558474 CCDC140Q96MF4 163 aa11.54□□□□□ -0.56
VPS18-202ENST00000558474 SLC45A2Q9UMX9 530 aa11.54□□□□□ -0.56
VPS18-202ENST00000558474 CUBNO60494 3623 aa11.53□□□□□ -0.56
VPS18-202ENST00000558474 TSPAN15O95858 294 aa11.53□□□□□ -0.56
VPS18-202ENST00000558474 RPLP1P05386 114 aaKnown RBP11.53□□□□□ -0.56
VPS18-202ENST00000558474 CLEC3BP05452 202 aa11.53□□□□□ -0.56
VPS18-202ENST00000558474 CTSGP08311 255 aa11.53□□□□□ -0.56
VPS18-202ENST00000558474 PRR20EP86478 221 aa11.53□□□□□ -0.56
VPS18-202ENST00000558474 PRR20CP86479 221 aa11.53□□□□□ -0.56
VPS18-202ENST00000558474 PRR20DP86480 221 aa11.53□□□□□ -0.56
VPS18-202ENST00000558474 PRR20BP86481 221 aa11.53□□□□□ -0.56
VPS18-202ENST00000558474 PRR20AP86496 221 aa11.53□□□□□ -0.56
VPS18-202ENST00000558474 RUNX1Q01196 453 aa11.53□□□□□ -0.56
VPS18-202ENST00000558474 C10orf99Q6UWK7 81 aa11.53□□□□□ -0.56
VPS18-202ENST00000558474 ZNF767PQ75MW2 155 aa11.53□□□□□ -0.56
VPS18-202ENST00000558474 RSG1Q9BU20 258 aa11.53□□□□□ -0.56
VPS18-202ENST00000558474 C19orf24Q9BVV8 132 aa11.53□□□□□ -0.56
VPS18-202ENST00000558474 SLC25A32Q9H2D1 315 aa11.53□□□□□ -0.56
VPS18-202ENST00000558474 TGOLN2O43493 480 aa11.52□□□□□ -0.57
VPS18-202ENST00000558474 TOMM40O96008 361 aa11.52□□□□□ -0.57
VPS18-202ENST00000558474 IGKV1-17P01599 117 aa11.52□□□□□ -0.57
VPS18-202ENST00000558474 PLP1P60201 277 aa11.52□□□□□ -0.57
VPS18-202ENST00000558474 RELQ04864 619 aaPredicted RBP11.52□□□□□ -0.57
VPS18-202ENST00000558474 DPPA3Q6W0C5 159 aa11.52□□□□□ -0.57
VPS18-202ENST00000558474 Q6ZRG5 221 aa11.52□□□□□ -0.57
VPS18-202ENST00000558474 ZNF680Q8NEM1 530 aa11.52□□□□□ -0.57
VPS18-202ENST00000558474 BPIFCQ8NFQ6 507 aa11.52□□□□□ -0.57
VPS18-202ENST00000558474 LRRC20Q8TCA0 184 aa11.52□□□□□ -0.57
VPS18-202ENST00000558474 PEF1Q9UBV8 284 aaKnown RBP11.52□□□□□ -0.57
VPS18-202ENST00000558474 PXMP4Q9Y6I8 212 aa11.52□□□□□ -0.57
VPS18-202ENST00000558474 OR2T8A6NH00 312 aa11.51□□□□□ -0.57
VPS18-202ENST00000558474 LGALS1P09382 135 aaKnown RBP11.51□□□□□ -0.57
VPS18-202ENST00000558474 RD3LP0DJH9 198 aa11.51□□□□□ -0.57
VPS18-202ENST00000558474 GPR183P32249 361 aa11.51□□□□□ -0.57
VPS18-202ENST00000558474 B2MP61769 119 aa11.51□□□□□ -0.57
VPS18-202ENST00000558474 DEFA5Q01523 94 aa11.51□□□□□ -0.57
VPS18-202ENST00000558474 ZNF616Q08AN1 781 aa11.51□□□□□ -0.57
VPS18-202ENST00000558474 ACOT6Q3I5F7 207 aaPredicted RBP11.51□□□□□ -0.57
VPS18-202ENST00000558474 CLEC19AQ6UXS0 136 aa11.51□□□□□ -0.57
VPS18-202ENST00000558474 ZNF600Q6ZNG1 722 aa11.51□□□□□ -0.57
VPS18-202ENST00000558474 STPG3Q8N7X2 389 aa11.51□□□□□ -0.57
VPS18-202ENST00000558474 Q8WTZ3 238 aa11.51□□□□□ -0.57
VPS18-202ENST00000558474 TMED6Q8WW62 240 aa11.51□□□□□ -0.57
VPS18-202ENST00000558474 SH3BGRL3Q9H299 93 aa11.51□□□□□ -0.57
VPS18-202ENST00000558474 SLC39A9Q9NUM3 307 aa11.51□□□□□ -0.57
VPS18-202ENST00000558474 UBQLN2Q9UHD9 624 aa11.51□□□□□ -0.57
VPS18-202ENST00000558474 MAST4O15021 2626 aa11.51□□□□□ -0.57
VPS18-202ENST00000558474 RGS13O14921 159 aa11.5□□□□□ -0.57
VPS18-202ENST00000558474 OR2C1O95371 312 aa11.5□□□□□ -0.57
VPS18-202ENST00000558474 IGHV3-23P01764 117 aa11.5□□□□□ -0.57
VPS18-202ENST00000558474 LINC00869P0C866 280 aa11.5□□□□□ -0.57
VPS18-202ENST00000558474 M6PRP20645 277 aa11.5□□□□□ -0.57
VPS18-202ENST00000558474 S100A7P31151 101 aa11.5□□□□□ -0.57
VPS18-202ENST00000558474 ARL3P36405 182 aa11.5□□□□□ -0.57
VPS18-202ENST00000558474 SULT1A2P50226 295 aa11.5□□□□□ -0.57
VPS18-202ENST00000558474 IFITM2Q01629 132 aa11.5□□□□□ -0.57
VPS18-202ENST00000558474 ZNF90Q03938 601 aa11.5□□□□□ -0.57
VPS18-202ENST00000558474 TIGITQ495A1 244 aa11.5□□□□□ -0.57
VPS18-202ENST00000558474 TCTEX1D4Q5JR98 221 aa11.5□□□□□ -0.57
VPS18-202ENST00000558474 AKR1C8PQ5T2L2 129 aa11.5□□□□□ -0.57
VPS18-202ENST00000558474 MIC13Q5XKP0 118 aa11.5□□□□□ -0.57
VPS18-202ENST00000558474 S100A7AQ86SG5 101 aa11.5□□□□□ -0.57
VPS18-202ENST00000558474 OR51G1Q8NGK1 321 aa11.5□□□□□ -0.57
VPS18-202ENST00000558474 OR1L4Q8NGR5 311 aa11.5□□□□□ -0.57
VPS18-202ENST00000558474 RNF141Q8WVD5 230 aa11.5□□□□□ -0.57
VPS18-202ENST00000558474 C4orf3Q8WVX3 66 aa11.5□□□□□ -0.57
VPS18-202ENST00000558474 PFDN5Q99471 154 aa11.5□□□□□ -0.57
VPS18-202ENST00000558474 RNF2Q99496 336 aa11.5□□□□□ -0.57
VPS18-202ENST00000558474 TSSC4Q9Y5U2 329 aaPredicted RBP11.5□□□□□ -0.57
VPS18-202ENST00000558474 S4R3C0 116 aa11.5□□□□□ -0.57
VPS18-202ENST00000558474 ELOA3CA0A087WX78 387 aaPredicted RBP11.49□□□□□ -0.57
VPS18-202ENST00000558474 GGCTO75223 188 aaKnown RBP11.49□□□□□ -0.57
VPS18-202ENST00000558474 PSG1P11464 419 aa11.49□□□□□ -0.57
VPS18-202ENST00000558474 ADMP35318 185 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms