RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 FAM106AQ4KMX7 169 aa16.29■□□□□ 0.2
CASC4-204ENST00000557945 C1QL4Q86Z23 238 aa16.29■□□□□ 0.2
CASC4-204ENST00000557945 ZNF320A2RRD8 509 aa16.28■□□□□ 0.2
CASC4-204ENST00000557945 DLK1P80370 383 aa16.28■□□□□ 0.2
CASC4-204ENST00000557945 RELQ04864 619 aaPredicted RBP16.28■□□□□ 0.2
CASC4-204ENST00000557945 SLC38A11Q08AI6 406 aa16.28■□□□□ 0.2
CASC4-204ENST00000557945 TIGITQ495A1 244 aa16.28■□□□□ 0.2
CASC4-204ENST00000557945 Q5BKY6 102 aa16.28■□□□□ 0.2
CASC4-204ENST00000557945 GPHB5Q86YW7 130 aa16.28■□□□□ 0.2
CASC4-204ENST00000557945 OR1S2Q8NGQ3 325 aa16.28■□□□□ 0.2
CASC4-204ENST00000557945 TRRAPQ9Y4A5 3859 aa16.28■□□□□ 0.2
CASC4-204ENST00000557945 ZFP92A6NM28 416 aa16.27■□□□□ 0.2
CASC4-204ENST00000557945 YIF1AO95070 293 aa16.27■□□□□ 0.2
CASC4-204ENST00000557945 IGLC1P0CG04 106 aa16.27■□□□□ 0.2
CASC4-204ENST00000557945 EWSR1Q01844 656 aaKnown RBP eCLIP16.27■□□□□ 0.2
CASC4-204ENST00000557945 WFDC9Q8NEX5 89 aa16.27■□□□□ 0.2
CASC4-204ENST00000557945 IGKV1-17P01599 117 aa16.26■□□□□ 0.19
CASC4-204ENST00000557945 LYL1P12980 280 aa16.26■□□□□ 0.19
CASC4-204ENST00000557945 HBG1P69891 147 aa16.26■□□□□ 0.19
CASC4-204ENST00000557945 HBG2P69892 147 aa16.26■□□□□ 0.19
CASC4-204ENST00000557945 NHLH2Q02577 135 aa16.26■□□□□ 0.19
CASC4-204ENST00000557945 LILRB2Q8N423 598 aa16.26■□□□□ 0.19
CASC4-204ENST00000557945 A0A1B0GVG6 124 aa16.26■□□□□ 0.19
CASC4-204ENST00000557945 NDUFA4O00483 81 aa16.26■□□□□ 0.19
CASC4-204ENST00000557945 RPL12P30050 165 aaKnown RBP16.26■□□□□ 0.19
CASC4-204ENST00000557945 S100A11P31949 105 aa16.26■□□□□ 0.19
CASC4-204ENST00000557945 ZNF600Q6ZNG1 722 aa16.26■□□□□ 0.19
CASC4-204ENST00000557945 OR9G4Q8NGQ1 327 aa16.26■□□□□ 0.19
CASC4-204ENST00000557945 C20orf24Q9BUV8 137 aa16.26■□□□□ 0.19
CASC4-204ENST00000557945 GGACTQ9BVM4 153 aa16.26■□□□□ 0.19
CASC4-204ENST00000557945 VWFP04275 2813 aa16.25■□□□□ 0.19
CASC4-204ENST00000557945 IGHV3OR16-8A0A075B7F1 116 aa16.25■□□□□ 0.19
CASC4-204ENST00000557945 BAXQ07812 192 aa16.25■□□□□ 0.19
CASC4-204ENST00000557945 UNQ9165/PRO28630Q6UXU0 137 aa16.25■□□□□ 0.19
CASC4-204ENST00000557945 TMEM144Q7Z5S9 345 aa16.25■□□□□ 0.19
CASC4-204ENST00000557945 PEMTQ9UBM1 199 aa16.25■□□□□ 0.19
CASC4-204ENST00000557945 FXYD6-FXYD2A0A087WZ82 144 aa16.24■□□□□ 0.19
CASC4-204ENST00000557945 SEC14L6B5MCN3 397 aa16.24■□□□□ 0.19
CASC4-204ENST00000557945 FNDC10F2Z333 226 aa16.24■□□□□ 0.19
CASC4-204ENST00000557945 SMLR1H3BR10 107 aa16.24■□□□□ 0.19
CASC4-204ENST00000557945 LGALS9O00182 355 aa16.24■□□□□ 0.19
CASC4-204ENST00000557945 IGLL1P15814 213 aa16.24■□□□□ 0.19
CASC4-204ENST00000557945 NUP62P37198 522 aaPredicted RBP16.24■□□□□ 0.19
CASC4-204ENST00000557945 REC114Q7Z4M0 266 aa16.24■□□□□ 0.19
CASC4-204ENST00000557945 THAP8Q8NA92 274 aa16.24■□□□□ 0.19
CASC4-204ENST00000557945 TMEM190Q8WZ59 177 aa16.24■□□□□ 0.19
CASC4-204ENST00000557945 ELOVL1Q9BW60 279 aa16.24■□□□□ 0.19
CASC4-204ENST00000557945 NPVFQ9HCQ7 196 aa16.24■□□□□ 0.19
CASC4-204ENST00000557945 UQCC1Q9NVA1 299 aa16.24■□□□□ 0.19
CASC4-204ENST00000557945 PUS1Q9Y606 427 aaKnown RBP eCLIP16.24■□□□□ 0.19
CASC4-204ENST00000557945 IGKV1D-37A0A075B6S9 117 aa16.23■□□□□ 0.19
CASC4-204ENST00000557945 YPEL3P61236 119 aaPredicted RBP16.23■□□□□ 0.19
CASC4-204ENST00000557945 TOMM20LQ6UXN7 152 aa16.23■□□□□ 0.19
CASC4-204ENST00000557945 OR5C1Q8NGR4 320 aa16.23■□□□□ 0.19
CASC4-204ENST00000557945 Q8WTZ3 238 aa16.23■□□□□ 0.19
CASC4-204ENST00000557945 RCC1LQ96I51 464 aaKnown RBP16.23■□□□□ 0.19
CASC4-204ENST00000557945 MCRIP2Q9BUT9 160 aaKnown RBP16.23■□□□□ 0.19
CASC4-204ENST00000557945 TMEM147Q9BVK8 224 aa16.23■□□□□ 0.19
CASC4-204ENST00000557945 UFC1Q9Y3C8 167 aa16.23■□□□□ 0.19
CASC4-204ENST00000557945 HSPB11Q9Y547 144 aa16.23■□□□□ 0.19
CASC4-204ENST00000557945 IGKV1OR2-108A0A075B7D4 117 aa16.22■□□□□ 0.19
CASC4-204ENST00000557945 FABP1P07148 127 aa16.22■□□□□ 0.19
CASC4-204ENST00000557945 RD3LP0DJH9 198 aa16.22■□□□□ 0.19
CASC4-204ENST00000557945 ZNF90Q03938 601 aa16.22■□□□□ 0.19
CASC4-204ENST00000557945 CLINT1Q14677 625 aa16.22■□□□□ 0.19
CASC4-204ENST00000557945 ATP6V1FQ16864 119 aa16.22■□□□□ 0.19
CASC4-204ENST00000557945 ZNF414Q96IQ9 312 aa16.22■□□□□ 0.19
CASC4-204ENST00000557945 TRGV9Q99603 122 aa16.22■□□□□ 0.19
CASC4-204ENST00000557945 G3V3Q6 166 aa16.21■□□□□ 0.19
CASC4-204ENST00000557945 ZNF207O43670 478 aaKnown RBP16.21■□□□□ 0.19
CASC4-204ENST00000557945 SAP30O75446 220 aa16.21■□□□□ 0.19
CASC4-204ENST00000557945 OR2F1Q13607 317 aa16.21■□□□□ 0.19
CASC4-204ENST00000557945 TM4SF20Q53R12 229 aa16.21■□□□□ 0.19
CASC4-204ENST00000557945 ZNF546Q86UE3 836 aa16.21■□□□□ 0.19
CASC4-204ENST00000557945 INO80EQ8NBZ0 244 aaPredicted RBP16.21■□□□□ 0.19
CASC4-204ENST00000557945 NOTCH3Q9UM47 2321 aa16.21■□□□□ 0.18
CASC4-204ENST00000557945 UBE2L5PA0A1B0GUS4 154 aa16.2■□□□□ 0.18
CASC4-204ENST00000557945 TOMM40O96008 361 aa16.2■□□□□ 0.18
CASC4-204ENST00000557945 PSG1P11464 419 aa16.2■□□□□ 0.18
CASC4-204ENST00000557945 TEPPQ6URK8 271 aa16.2■□□□□ 0.18
CASC4-204ENST00000557945 SMIM3Q9BZL3 60 aa16.2■□□□□ 0.18
CASC4-204ENST00000557945 C2orf70A6NJV1 201 aa16.19■□□□□ 0.18
CASC4-204ENST00000557945 A8MWP6 167 aa16.19■□□□□ 0.18
CASC4-204ENST00000557945 CSN3P07498 182 aa16.19■□□□□ 0.18
CASC4-204ENST00000557945 VWC2Q2TAL6 325 aa16.19■□□□□ 0.18
CASC4-204ENST00000557945 C9orf66Q5T8R8 295 aa16.19■□□□□ 0.18
CASC4-204ENST00000557945 IL34Q6ZMJ4 242 aa16.19■□□□□ 0.18
CASC4-204ENST00000557945 AKAP14Q86UN6 197 aa16.19■□□□□ 0.18
CASC4-204ENST00000557945 ST6GAL2Q96JF0 529 aa16.19■□□□□ 0.18
CASC4-204ENST00000557945 GINS3Q9BRX5 216 aa16.19■□□□□ 0.18
CASC4-204ENST00000557945 ZFAND3Q9H8U3 227 aa16.19■□□□□ 0.18
CASC4-204ENST00000557945 DAZ1Q9NQZ3 744 aaKnown RBP16.19■□□□□ 0.18
CASC4-204ENST00000557945 TMEM213A2RRL7 107 aa16.18■□□□□ 0.18
CASC4-204ENST00000557945 EDN2P20800 178 aa16.18■□□□□ 0.18
CASC4-204ENST00000557945 ELLP55199 621 aaPredicted RBP16.18■□□□□ 0.18
CASC4-204ENST00000557945 OXLD1Q5BKU9 147 aa16.18■□□□□ 0.18
CASC4-204ENST00000557945 CYP2G1PQ6ZSU1 146 aa16.18■□□□□ 0.18
CASC4-204ENST00000557945 OR51G1Q8NGK1 321 aa16.18■□□□□ 0.18
CASC4-204ENST00000557945 AQP10Q96PS8 301 aa16.18■□□□□ 0.18
CASC4-204ENST00000557945 K7EMT4 169 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms