RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 RNASEH2CQ8TDP1 164 aaKnown RBP10.71□□□□□ -0.69
SHMT2-235ENST00000557740 RABL2AQ9UBK7 228 aaPredicted RBP10.71□□□□□ -0.69
SHMT2-235ENST00000557740 RABL2BQ9UNT1 228 aa10.71□□□□□ -0.69
SHMT2-235ENST00000557740 K7EQG2 157 aa10.7□□□□□ -0.7
SHMT2-235ENST00000557740 CTDSPLO15194 276 aa10.7□□□□□ -0.7
SHMT2-235ENST00000557740 ZNF688P0C7X2 276 aa10.7□□□□□ -0.7
SHMT2-235ENST00000557740 IGLC1P0CG04 106 aa10.7□□□□□ -0.7
SHMT2-235ENST00000557740 OR10J1P30954 320 aa10.7□□□□□ -0.7
SHMT2-235ENST00000557740 ALDH3B2P48448 385 aa10.7□□□□□ -0.7
SHMT2-235ENST00000557740 ETFRF1Q6IPR1 90 aa10.7□□□□□ -0.7
SHMT2-235ENST00000557740 PRSS54Q6PEW0 395 aa10.7□□□□□ -0.7
SHMT2-235ENST00000557740 CLVS1Q8IUQ0 354 aaPredicted RBP10.7□□□□□ -0.7
SHMT2-235ENST00000557740 OR51S1Q8NGJ8 323 aa10.7□□□□□ -0.7
SHMT2-235ENST00000557740 Q8WTZ3 238 aa10.7□□□□□ -0.7
SHMT2-235ENST00000557740 GPR146Q96CH1 333 aa10.7□□□□□ -0.7
SHMT2-235ENST00000557740 CCDC59Q9P031 241 aaKnown RBP10.7□□□□□ -0.7
SHMT2-235ENST00000557740 CACFD1Q9UGQ2 172 aa10.7□□□□□ -0.7
SHMT2-235ENST00000557740 GPR132Q9UNW8 380 aa10.7□□□□□ -0.7
SHMT2-235ENST00000557740 HELTA6NFD8 242 aa10.69□□□□□ -0.7
SHMT2-235ENST00000557740 DEFB4AO15263 64 aa10.69□□□□□ -0.7
SHMT2-235ENST00000557740 NXPH3O95157 252 aa10.69□□□□□ -0.7
SHMT2-235ENST00000557740 HNRNPCP07910 306 aaKnown RBP eCLIP10.69□□□□□ -0.7
SHMT2-235ENST00000557740 SULT1A3P0DMM9 295 aa10.69□□□□□ -0.7
SHMT2-235ENST00000557740 SULT1A4P0DMN0 295 aa10.69□□□□□ -0.7
SHMT2-235ENST00000557740 SPP1P10451 314 aa10.69□□□□□ -0.7
SHMT2-235ENST00000557740 NPY1RP25929 384 aa10.69□□□□□ -0.7
SHMT2-235ENST00000557740 TMEM41BQ5BJD5 291 aa10.69□□□□□ -0.7
SHMT2-235ENST00000557740 TRPT1Q86TN4 253 aaKnown RBP10.69□□□□□ -0.7
SHMT2-235ENST00000557740 NOXA1Q86UR1 476 aa10.69□□□□□ -0.7
SHMT2-235ENST00000557740 RAB2BQ8WUD1 216 aa10.69□□□□□ -0.7
SHMT2-235ENST00000557740 SCP2D1Q9UJQ7 156 aa10.69□□□□□ -0.7
SHMT2-235ENST00000557740 KCNIP3Q9Y2W7 256 aa10.69□□□□□ -0.7
SHMT2-235ENST00000557740 TMEM56-RWDD3S4R434 201 aa10.69□□□□□ -0.7
SHMT2-235ENST00000557740 KNCNA6PVL3 124 aa10.68□□□□□ -0.7
SHMT2-235ENST00000557740 NOL3O60936 208 aaKnown RBP10.68□□□□□ -0.7
SHMT2-235ENST00000557740 YPEL3P61236 119 aaPredicted RBP10.68□□□□□ -0.7
SHMT2-235ENST00000557740 DHRS2Q13268 280 aa10.68□□□□□ -0.7
SHMT2-235ENST00000557740 MORN3Q6PF18 240 aaPredicted RBP10.68□□□□□ -0.7
SHMT2-235ENST00000557740 DCANP1Q8TF63 244 aa10.68□□□□□ -0.7
SHMT2-235ENST00000557740 IL22RA2Q969J5 263 aa10.68□□□□□ -0.7
SHMT2-235ENST00000557740 ACY3Q96HD9 319 aa10.68□□□□□ -0.7
SHMT2-235ENST00000557740 SCGB3A2Q96PL1 93 aa10.68□□□□□ -0.7
SHMT2-235ENST00000557740 MCUBQ9NWR8 336 aa10.68□□□□□ -0.7
SHMT2-235ENST00000557740 RSL24D1Q9UHA3 163 aaKnown RBP10.68□□□□□ -0.7
SHMT2-235ENST00000557740 ANKRD20A5PA0PJZ0 165 aa10.67□□□□□ -0.7
SHMT2-235ENST00000557740 GSTZ1O43708 216 aaPredicted RBP10.67□□□□□ -0.7
SHMT2-235ENST00000557740 IFNA10P01566 189 aa10.67□□□□□ -0.7
SHMT2-235ENST00000557740 IL4P05112 153 aa10.67□□□□□ -0.7
SHMT2-235ENST00000557740 AP2S1P53680 142 aaPredicted RBP10.67□□□□□ -0.7
SHMT2-235ENST00000557740 PSMG4Q5JS54 123 aa10.67□□□□□ -0.7
SHMT2-235ENST00000557740 ACTL10Q5JWF8 245 aa10.67□□□□□ -0.7
SHMT2-235ENST00000557740 LGALS9CQ6DKI2 356 aa10.67□□□□□ -0.7
SHMT2-235ENST00000557740 RPP25LQ8N5L8 163 aaKnown RBP10.67□□□□□ -0.7
SHMT2-235ENST00000557740 NPIPB3Q92617 1050 aa10.67□□□□□ -0.7
SHMT2-235ENST00000557740 BCL7BQ9BQE9 202 aa10.67□□□□□ -0.7
SHMT2-235ENST00000557740 DEDDO75618 318 aa10.66□□□□□ -0.7
SHMT2-235ENST00000557740 TMBIM6P55061 237 aa10.66□□□□□ -0.7
SHMT2-235ENST00000557740 NMSQ5H8A3 153 aa10.66□□□□□ -0.7
SHMT2-235ENST00000557740 C16orf54Q6UWD8 224 aa10.66□□□□□ -0.7
SHMT2-235ENST00000557740 Q8NAQ8 132 aa10.66□□□□□ -0.7
SHMT2-235ENST00000557740 DYNC2LI1Q8TCX1 351 aa10.66□□□□□ -0.7
SHMT2-235ENST00000557740 C2CD4CQ8TF44 421 aa10.66□□□□□ -0.7
SHMT2-235ENST00000557740 TMEM170AQ8WVE7 144 aa10.66□□□□□ -0.7
SHMT2-235ENST00000557740 GLMPQ8WWB7 406 aa10.66□□□□□ -0.7
SHMT2-235ENST00000557740 PRR13Q9NZ81 148 aa10.66□□□□□ -0.7
SHMT2-235ENST00000557740 U3KQE9 123 aa10.66□□□□□ -0.7
SHMT2-235ENST00000557740 A0A0B4J2A0 478 aa10.65□□□□□ -0.7
SHMT2-235ENST00000557740 IGHV4-28A0A0C4DH34 117 aa10.65□□□□□ -0.7
SHMT2-235ENST00000557740 TOMM40O96008 361 aa10.65□□□□□ -0.7
SHMT2-235ENST00000557740 GIG44P09565 113 aaPredicted RBP10.65□□□□□ -0.7
SHMT2-235ENST00000557740 RD3LP0DJH9 198 aa10.65□□□□□ -0.7
SHMT2-235ENST00000557740 ANXA3P12429 323 aa10.65□□□□□ -0.7
SHMT2-235ENST00000557740 MIFP14174 115 aa10.65□□□□□ -0.7
SHMT2-235ENST00000557740 AKR1C4P17516 323 aa10.65□□□□□ -0.7
SHMT2-235ENST00000557740 C4BPBP20851 252 aa10.65□□□□□ -0.7
SHMT2-235ENST00000557740 NUP62P37198 522 aaPredicted RBP10.65□□□□□ -0.7
SHMT2-235ENST00000557740 CCR6P51684 374 aa10.65□□□□□ -0.7
SHMT2-235ENST00000557740 SNRPD3P62318 126 aaKnown RBP10.65□□□□□ -0.7
SHMT2-235ENST00000557740 SRPXP78539 464 aa10.65□□□□□ -0.7
SHMT2-235ENST00000557740 SMCO1Q147U7 214 aa10.65□□□□□ -0.7
SHMT2-235ENST00000557740 USF2Q15853 346 aaPredicted RBP10.65□□□□□ -0.7
SHMT2-235ENST00000557740 CENPSQ8N2Z9 138 aa10.65□□□□□ -0.7
SHMT2-235ENST00000557740 DTD1Q8TEA8 209 aa10.65□□□□□ -0.7
SHMT2-235ENST00000557740 SHPKQ9UHJ6 478 aa10.65□□□□□ -0.7
SHMT2-235ENST00000557740 U3KQ87 197 aa10.65□□□□□ -0.7
SHMT2-235ENST00000557740 C11orf94C9JXX5 98 aa10.64□□□□□ -0.71
SHMT2-235ENST00000557740 SIGLEC15Q6ZMC9 328 aa10.64□□□□□ -0.71
SHMT2-235ENST00000557740 LGI3Q8N145 548 aa10.64□□□□□ -0.71
SHMT2-235ENST00000557740 HRH4Q9H3N8 390 aa10.64□□□□□ -0.71
SHMT2-235ENST00000557740 NRN1Q9NPD7 142 aa10.64□□□□□ -0.71
SHMT2-235ENST00000557740 HSPB7Q9UBY9 170 aa10.64□□□□□ -0.71
SHMT2-235ENST00000557740 PIGBOS1A0A0B4J2F0 54 aa10.63□□□□□ -0.71
SHMT2-235ENST00000557740 FAM90A26D6RGX4 464 aa10.63□□□□□ -0.71
SHMT2-235ENST00000557740 FAUP35544 74 aaKnown RBP10.63□□□□□ -0.71
SHMT2-235ENST00000557740 TCTAP57738 103 aa10.63□□□□□ -0.71
SHMT2-235ENST00000557740 NUTF2P61970 127 aaKnown RBP10.63□□□□□ -0.71
SHMT2-235ENST00000557740 LYZL2Q7Z4W2 148 aa10.63□□□□□ -0.71
SHMT2-235ENST00000557740 OR1S1Q8NH92 325 aa10.63□□□□□ -0.71
SHMT2-235ENST00000557740 SLC35E1Q96K37 410 aa10.63□□□□□ -0.71
SHMT2-235ENST00000557740 RAB40CQ96S21 281 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms