RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 FAM25GB3EWG6 89 aa11.49□□□□□ -0.57
SCFD1-224ENST00000557713 TNFAIP8O95379 198 aa11.49□□□□□ -0.57
SCFD1-224ENST00000557713 CDS2O95674 445 aa11.49□□□□□ -0.57
SCFD1-224ENST00000557713 CD74P04233 296 aa11.49□□□□□ -0.57
SCFD1-224ENST00000557713 EIF2B2P49770 351 aaKnown RBP11.49□□□□□ -0.57
SCFD1-224ENST00000557713 AP2S1P53680 142 aaPredicted RBP11.49□□□□□ -0.57
SCFD1-224ENST00000557713 YPEL3P61236 119 aaPredicted RBP11.49□□□□□ -0.57
SCFD1-224ENST00000557713 C12orf74Q32Q52 190 aa11.49□□□□□ -0.57
SCFD1-224ENST00000557713 PSMG4Q5JS54 123 aa11.49□□□□□ -0.57
SCFD1-224ENST00000557713 MZT2AQ6P582 158 aa11.49□□□□□ -0.57
SCFD1-224ENST00000557713 FAM219AQ8IW50 185 aa11.49□□□□□ -0.57
SCFD1-224ENST00000557713 TMEM229BQ8NBD8 167 aa11.49□□□□□ -0.57
SCFD1-224ENST00000557713 OR1S2Q8NGQ3 325 aa11.49□□□□□ -0.57
SCFD1-224ENST00000557713 MARCH1Q8TCQ1 289 aa11.49□□□□□ -0.57
SCFD1-224ENST00000557713 Q8WTZ3 238 aa11.49□□□□□ -0.57
SCFD1-224ENST00000557713 ABHD1Q96SE0 405 aa11.49□□□□□ -0.57
SCFD1-224ENST00000557713 TMEM222Q9H0R3 208 aa11.49□□□□□ -0.57
SCFD1-224ENST00000557713 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.49□□□□□ -0.57
SCFD1-224ENST00000557713 CELA1Q9UNI1 258 aa11.49□□□□□ -0.57
SCFD1-224ENST00000557713 HNRNPCP07910 306 aaKnown RBP eCLIP11.48□□□□□ -0.57
SCFD1-224ENST00000557713 DHODHQ02127 395 aa11.48□□□□□ -0.57
SCFD1-224ENST00000557713 C2orf83Q53S99 150 aa11.48□□□□□ -0.57
SCFD1-224ENST00000557713 LINC00336Q6ZUF6 198 aa11.48□□□□□ -0.57
SCFD1-224ENST00000557713 CENPSQ8N2Z9 138 aa11.48□□□□□ -0.57
SCFD1-224ENST00000557713 RNASE11Q8TAA1 199 aaKnown RBP11.48□□□□□ -0.57
SCFD1-224ENST00000557713 LHFPL5Q8TAF8 219 aa11.48□□□□□ -0.57
SCFD1-224ENST00000557713 GLYATL2Q8WU03 294 aa11.48□□□□□ -0.57
SCFD1-224ENST00000557713 SEPSECSQ9HD40 501 aaKnown RBP11.48□□□□□ -0.57
SCFD1-224ENST00000557713 HEYLQ9NQ87 328 aaPredicted RBP11.48□□□□□ -0.57
SCFD1-224ENST00000557713 TEX13DA0A0J9YY54 714 aaPredicted RBP11.47□□□□□ -0.57
SCFD1-224ENST00000557713 A0A1B0GVY2 172 aa11.47□□□□□ -0.57
SCFD1-224ENST00000557713 SLC25A4P12235 298 aa11.47□□□□□ -0.57
SCFD1-224ENST00000557713 OR10J1P30954 320 aa11.47□□□□□ -0.57
SCFD1-224ENST00000557713 RND2P52198 227 aa11.47□□□□□ -0.57
SCFD1-224ENST00000557713 USF2Q15853 346 aaPredicted RBP11.47□□□□□ -0.57
SCFD1-224ENST00000557713 SCGB2B2Q4G0G5 96 aa11.47□□□□□ -0.57
SCFD1-224ENST00000557713 SELENOHQ8IZQ5 122 aaKnown RBP11.47□□□□□ -0.57
SCFD1-224ENST00000557713 RNASEH2CQ8TDP1 164 aaKnown RBP11.47□□□□□ -0.57
SCFD1-224ENST00000557713 TMEM170AQ8WVE7 144 aa11.47□□□□□ -0.57
SCFD1-224ENST00000557713 RTBDNQ9BSG5 229 aaPredicted RBP11.47□□□□□ -0.57
SCFD1-224ENST00000557713 EXTL2Q9UBQ6 330 aa11.47□□□□□ -0.57
SCFD1-224ENST00000557713 DEFB131BA0A096LNP1 70 aa11.46□□□□□ -0.57
SCFD1-224ENST00000557713 FAM90A26D6RGX4 464 aa11.46□□□□□ -0.57
SCFD1-224ENST00000557713 BUB3O43684 328 aa11.46□□□□□ -0.57
SCFD1-224ENST00000557713 RAB3DO95716 219 aa11.46□□□□□ -0.57
SCFD1-224ENST00000557713 AMBPP02760 352 aa11.46□□□□□ -0.57
SCFD1-224ENST00000557713 OR5AC1P0C628 307 aa11.46□□□□□ -0.57
SCFD1-224ENST00000557713 TAS2R19P59542 299 aa11.46□□□□□ -0.57
SCFD1-224ENST00000557713 ZNF767PQ75MW2 155 aa11.46□□□□□ -0.57
SCFD1-224ENST00000557713 GPR146Q96CH1 333 aa11.46□□□□□ -0.57
SCFD1-224ENST00000557713 C1QTNF4Q9BXJ3 329 aa11.46□□□□□ -0.57
SCFD1-224ENST00000557713 H3BMM0 161 aa11.45□□□□□ -0.58
SCFD1-224ENST00000557713 NXPH3O95157 252 aa11.45□□□□□ -0.58
SCFD1-224ENST00000557713 ZNF182P17025 639 aaPredicted RBP11.45□□□□□ -0.58
SCFD1-224ENST00000557713 NUTF2P61970 127 aaKnown RBP11.45□□□□□ -0.58
SCFD1-224ENST00000557713 SNRPD3P62318 126 aaKnown RBP11.45□□□□□ -0.58
SCFD1-224ENST00000557713 STEAP1BQ6NZ63 245 aa11.45□□□□□ -0.58
SCFD1-224ENST00000557713 SLC24A4Q8NFF2 622 aa11.45□□□□□ -0.58
SCFD1-224ENST00000557713 C15orf40Q8WUR7 153 aa11.45□□□□□ -0.58
SCFD1-224ENST00000557713 AP3S1Q92572 193 aa11.45□□□□□ -0.58
SCFD1-224ENST00000557713 NPIPB3Q92617 1050 aa11.45□□□□□ -0.58
SCFD1-224ENST00000557713 RBPMSQ93062 196 aaKnown RBP11.45□□□□□ -0.58
SCFD1-224ENST00000557713 SCRT1Q9BWW7 348 aa11.45□□□□□ -0.58
SCFD1-224ENST00000557713 NAA60Q9H7X0 242 aa11.45□□□□□ -0.58
SCFD1-224ENST00000557713 NRN1Q9NPD7 142 aa11.45□□□□□ -0.58
SCFD1-224ENST00000557713 XCL2Q9UBD3 114 aa11.45□□□□□ -0.58
SCFD1-224ENST00000557713 CACNG5Q9UF02 275 aa11.45□□□□□ -0.58
SCFD1-224ENST00000557713 IL4P05112 153 aa11.44□□□□□ -0.58
SCFD1-224ENST00000557713 MEF2DQ14814 521 aa11.44□□□□□ -0.58
SCFD1-224ENST00000557713 CTF1Q16619 201 aa11.44□□□□□ -0.58
SCFD1-224ENST00000557713 POM121L12Q8N7R1 296 aa11.44□□□□□ -0.58
SCFD1-224ENST00000557713 NAA50Q9GZZ1 169 aaKnown RBP11.44□□□□□ -0.58
SCFD1-224ENST00000557713 PKD1P98161 4303 aa11.43□□□□□ -0.58
SCFD1-224ENST00000557713 CEBPZOSA8MTT3 80 aa11.43□□□□□ -0.58
SCFD1-224ENST00000557713 GABARAPH6UMI1 98 aa11.43□□□□□ -0.58
SCFD1-224ENST00000557713 GABARAPO95166 117 aa11.43□□□□□ -0.58
SCFD1-224ENST00000557713 TOMM40O96008 361 aa11.43□□□□□ -0.58
SCFD1-224ENST00000557713 RD3LP0DJH9 198 aa11.43□□□□□ -0.58
SCFD1-224ENST00000557713 P0DMU3 169 aa11.43□□□□□ -0.58
SCFD1-224ENST00000557713 FAM231AP0DMU4 169 aa11.43□□□□□ -0.58
SCFD1-224ENST00000557713 FAM231CP0DMU5 169 aa11.43□□□□□ -0.58
SCFD1-224ENST00000557713 NPY1RP25929 384 aa11.43□□□□□ -0.58
SCFD1-224ENST00000557713 SURF2Q15527 256 aaPredicted RBP11.43□□□□□ -0.58
SCFD1-224ENST00000557713 TMEM268Q5VZI3 342 aa11.43□□□□□ -0.58
SCFD1-224ENST00000557713 ETFRF1Q6IPR1 90 aa11.43□□□□□ -0.58
SCFD1-224ENST00000557713 FAAP20Q6NZ36 180 aa11.43□□□□□ -0.58
SCFD1-224ENST00000557713 SIGLEC15Q6ZMC9 328 aa11.43□□□□□ -0.58
SCFD1-224ENST00000557713 ZNF705AQ6ZN79 300 aaPredicted RBP11.43□□□□□ -0.58
SCFD1-224ENST00000557713 NEU1Q99519 415 aa11.43□□□□□ -0.58
SCFD1-224ENST00000557713 NDUFAF3Q9BU61 184 aa11.43□□□□□ -0.58
SCFD1-224ENST00000557713 MIXL1Q9H2W2 232 aa11.43□□□□□ -0.58
SCFD1-224ENST00000557713 GPR132Q9UNW8 380 aa11.43□□□□□ -0.58
SCFD1-224ENST00000557713 C14orf166Q9Y224 244 aaKnown RBP11.43□□□□□ -0.58
SCFD1-224ENST00000557713 TMEM56-RWDD3S4R434 201 aa11.43□□□□□ -0.58
SCFD1-224ENST00000557713 DYNC1H1Q14204 4646 aaKnown RBP11.43□□□□□ -0.58
SCFD1-224ENST00000557713 PKHD1P08F94 4074 aa11.42□□□□□ -0.58
SCFD1-224ENST00000557713 CRYM-AS1A6NIL9 109 aa11.42□□□□□ -0.58
SCFD1-224ENST00000557713 PSG1P11464 419 aa11.42□□□□□ -0.58
SCFD1-224ENST00000557713 HLA-DRB4P13762 266 aa11.42□□□□□ -0.58
SCFD1-224ENST00000557713 NKX2-1P43699 371 aaPredicted RBP11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms