RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 SOX21Q9Y651 276 aaPredicted RBP9.83□□□□□ -0.84
SHMT2-233ENST00000557529 ASH1LQ9NR48 2969 aaKnown RBP9.83□□□□□ -0.84
SHMT2-233ENST00000557529 APCP25054 2843 aa9.83□□□□□ -0.84
SHMT2-233ENST00000557529 CR1P17927 2039 aa9.82□□□□□ -0.84
SHMT2-233ENST00000557529 TRAV30A0A087WSZ9 112 aa9.82□□□□□ -0.84
SHMT2-233ENST00000557529 ELOA3CA0A087WX78 387 aaPredicted RBP9.82□□□□□ -0.84
SHMT2-233ENST00000557529 COX7A2P2O60397 106 aa9.82□□□□□ -0.84
SHMT2-233ENST00000557529 SCGB2A1O75556 95 aa9.82□□□□□ -0.84
SHMT2-233ENST00000557529 EIF3GO75821 320 aaKnown RBP eCLIP9.82□□□□□ -0.84
SHMT2-233ENST00000557529 SRP19P09132 144 aaKnown RBP9.82□□□□□ -0.84
SHMT2-233ENST00000557529 IGLC1P0CG04 106 aa9.82□□□□□ -0.84
SHMT2-233ENST00000557529 GATA2P23769 480 aaPredicted RBP9.82□□□□□ -0.84
SHMT2-233ENST00000557529 CRIP2P52943 208 aaPredicted RBP9.82□□□□□ -0.84
SHMT2-233ENST00000557529 DEFA5Q01523 94 aa9.82□□□□□ -0.84
SHMT2-233ENST00000557529 ZNF90Q03938 601 aa9.82□□□□□ -0.84
SHMT2-233ENST00000557529 LY6EQ16553 131 aa9.82□□□□□ -0.84
SHMT2-233ENST00000557529 ECSCRQ19T08 205 aa9.82□□□□□ -0.84
SHMT2-233ENST00000557529 DEFB112Q30KQ8 113 aa9.82□□□□□ -0.84
SHMT2-233ENST00000557529 IQCF2Q8IXL9 164 aa9.82□□□□□ -0.84
SHMT2-233ENST00000557529 OR5R1Q8NH85 324 aa9.82□□□□□ -0.84
SHMT2-233ENST00000557529 SEPSECSQ9HD40 501 aaKnown RBP9.82□□□□□ -0.84
SHMT2-233ENST00000557529 TECRQ9NZ01 308 aaKnown RBP9.82□□□□□ -0.84
SHMT2-233ENST00000557529 CREBBPQ92793 2442 aa9.82□□□□□ -0.84
SHMT2-233ENST00000557529 PRRC2AP48634 2157 aaKnown RBP9.82□□□□□ -0.84
SHMT2-233ENST00000557529 PSMB11A5LHX3 300 aa9.81□□□□□ -0.84
SHMT2-233ENST00000557529 AMY1AP04745 511 aa9.81□□□□□ -0.84
SHMT2-233ENST00000557529 ARL14EPLP0DKL9 152 aa9.81□□□□□ -0.84
SHMT2-233ENST00000557529 MFAP4P55083 255 aa9.81□□□□□ -0.84
SHMT2-233ENST00000557529 SOHLH1Q5JUK2 328 aa9.81□□□□□ -0.84
SHMT2-233ENST00000557529 C10orf113Q5VZT2 155 aa9.81□□□□□ -0.84
SHMT2-233ENST00000557529 SPNS3Q6ZMD2 512 aa9.81□□□□□ -0.84
SHMT2-233ENST00000557529 VN1R17PQ8TDU5 208 aa9.81□□□□□ -0.84
SHMT2-233ENST00000557529 TMPRSS5Q9H3S3 457 aa9.81□□□□□ -0.84
SHMT2-233ENST00000557529 TRAV41A0A0B4J266 112 aa9.8□□□□□ -0.84
SHMT2-233ENST00000557529 SNAPINO95295 136 aa9.8□□□□□ -0.84
SHMT2-233ENST00000557529 C8orf88P0DMB2 117 aa9.8□□□□□ -0.84
SHMT2-233ENST00000557529 GCHFRP30047 84 aa9.8□□□□□ -0.84
SHMT2-233ENST00000557529 IER3P46695 156 aa9.8□□□□□ -0.84
SHMT2-233ENST00000557529 PLP1P60201 277 aa9.8□□□□□ -0.84
SHMT2-233ENST00000557529 MEF2BQ02080 365 aaPredicted RBP9.8□□□□□ -0.84
SHMT2-233ENST00000557529 SPATA31B1PQ5VZV4 182 aa9.8□□□□□ -0.84
SHMT2-233ENST00000557529 PQLC2Q6ZP29 291 aa9.8□□□□□ -0.84
SHMT2-233ENST00000557529 MIR17HGQ75NE6 70 aa9.8□□□□□ -0.84
SHMT2-233ENST00000557529 BCL6BQ8N143 479 aaPredicted RBP9.8□□□□□ -0.84
SHMT2-233ENST00000557529 TMEM37Q8WXS4 190 aa9.8□□□□□ -0.84
SHMT2-233ENST00000557529 TXN2Q99757 166 aa9.8□□□□□ -0.84
SHMT2-233ENST00000557529 TXNDC17Q9BRA2 123 aa9.8□□□□□ -0.84
SHMT2-233ENST00000557529 C21orf62Q9NYP8 219 aa9.8□□□□□ -0.84
SHMT2-233ENST00000557529 FBXL7Q9UJT9 491 aa9.8□□□□□ -0.84
SHMT2-233ENST00000557529 MDFIC2A0A1B0GVS7 189 aa9.79□□□□□ -0.84
SHMT2-233ENST00000557529 SH2D7A6NKC9 451 aaPredicted RBP9.79□□□□□ -0.84
SHMT2-233ENST00000557529 GNG7O60262 68 aa9.79□□□□□ -0.84
SHMT2-233ENST00000557529 HYPMO75409 117 aa9.79□□□□□ -0.84
SHMT2-233ENST00000557529 OR2J3O76001 311 aa9.79□□□□□ -0.84
SHMT2-233ENST00000557529 NDUFB8O95169 186 aa9.79□□□□□ -0.84
SHMT2-233ENST00000557529 IGHG2P01859 326 aa9.79□□□□□ -0.84
SHMT2-233ENST00000557529 IGF1P05019 195 aa9.79□□□□□ -0.84
SHMT2-233ENST00000557529 FCGR2BP31994 310 aaPredicted RBP9.79□□□□□ -0.84
SHMT2-233ENST00000557529 YPEL3P61236 119 aaPredicted RBP9.79□□□□□ -0.84
SHMT2-233ENST00000557529 GUCA2BQ16661 112 aa9.79□□□□□ -0.84
SHMT2-233ENST00000557529 TIGITQ495A1 244 aa9.79□□□□□ -0.84
SHMT2-233ENST00000557529 C9orf152Q5JTZ5 239 aa9.79□□□□□ -0.84
SHMT2-233ENST00000557529 SUN5Q8TC36 379 aa9.79□□□□□ -0.84
SHMT2-233ENST00000557529 TMEM167BQ9NRX6 74 aa9.79□□□□□ -0.84
SHMT2-233ENST00000557529 ARL2-SNX15V9GYD0 113 aa9.79□□□□□ -0.84
SHMT2-233ENST00000557529 ABCA1O95477 2261 aa9.79□□□□□ -0.84
SHMT2-233ENST00000557529 TRBV9A0A0B4J1U6 114 aa9.78□□□□□ -0.84
SHMT2-233ENST00000557529 LINC01548A6NM66 108 aa9.78□□□□□ -0.84
SHMT2-233ENST00000557529 G3V318 75 aa9.78□□□□□ -0.84
SHMT2-233ENST00000557529 TMEM250H0YL14 139 aa9.78□□□□□ -0.84
SHMT2-233ENST00000557529 SMAD7O15105 426 aaKnown RBP9.78□□□□□ -0.84
SHMT2-233ENST00000557529 PAGE4O60829 102 aa9.78□□□□□ -0.84
SHMT2-233ENST00000557529 TOMM40O96008 361 aa9.78□□□□□ -0.84
SHMT2-233ENST00000557529 IGKV1-17P01599 117 aa9.78□□□□□ -0.84
SHMT2-233ENST00000557529 IGHV4-59P01825 116 aa9.78□□□□□ -0.84
SHMT2-233ENST00000557529 RD3LP0DJH9 198 aa9.78□□□□□ -0.84
SHMT2-233ENST00000557529 Q56UQ5 140 aa9.78□□□□□ -0.84
SHMT2-233ENST00000557529 C19orf54Q5BKX5 351 aa9.78□□□□□ -0.84
SHMT2-233ENST00000557529 PATE2Q6UY27 113 aa9.78□□□□□ -0.84
SHMT2-233ENST00000557529 Q6YL49 198 aa9.78□□□□□ -0.84
SHMT2-233ENST00000557529 CYB561D1Q8N8Q1 229 aa9.78□□□□□ -0.84
SHMT2-233ENST00000557529 NECAP1Q8NC96 275 aa9.78□□□□□ -0.84
SHMT2-233ENST00000557529 STXBP6Q8NFX7 210 aa9.78□□□□□ -0.84
SHMT2-233ENST00000557529 OR1B1Q8NGR6 318 aa9.78□□□□□ -0.84
SHMT2-233ENST00000557529 ZNF355PQ9NSJ1 428 aa9.78□□□□□ -0.84
SHMT2-233ENST00000557529 GAR1Q9NY12 217 aaKnown RBP9.78□□□□□ -0.84
SHMT2-233ENST00000557529 DOK5Q9P104 306 aa9.78□□□□□ -0.84
SHMT2-233ENST00000557529 ZNF580Q9UK33 172 aa9.78□□□□□ -0.84
SHMT2-233ENST00000557529 C11orf94C9JXX5 98 aa9.77□□□□□ -0.84
SHMT2-233ENST00000557529 H3BUA1 57 aa9.77□□□□□ -0.84
SHMT2-233ENST00000557529 AP4M1O00189 453 aa9.77□□□□□ -0.84
SHMT2-233ENST00000557529 OR7C2O60412 319 aa9.77□□□□□ -0.84
SHMT2-233ENST00000557529 BRI3O95415 125 aa9.77□□□□□ -0.84
SHMT2-233ENST00000557529 PSG1P11464 419 aa9.77□□□□□ -0.84
SHMT2-233ENST00000557529 ORM2P19652 201 aa9.77□□□□□ -0.84
SHMT2-233ENST00000557529 CD81P60033 236 aa9.77□□□□□ -0.84
SHMT2-233ENST00000557529 RHOGP84095 191 aa9.77□□□□□ -0.84
SHMT2-233ENST00000557529 S100A7AQ86SG5 101 aa9.77□□□□□ -0.84
SHMT2-233ENST00000557529 CIARTQ8N365 385 aaPredicted RBP9.77□□□□□ -0.84
SHMT2-233ENST00000557529 OR51G1Q8NGK1 321 aa9.77□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms