RNA–Protein interactions for RNA: ENST00000557511.5

PSEN1-223, Transcript of presenilin 1, humanhuman

TSL 5 BASIC

Gene PSEN1, Length 1,230 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-223ENST00000557511 CD300EQ496F6 205 aaPredicted RBP6.32□□□□□ -1.4
PSEN1-223ENST00000557511 TM4SF20Q53R12 229 aa6.32□□□□□ -1.4
PSEN1-223ENST00000557511 BTNL8Q6UX41 500 aa6.32□□□□□ -1.4
PSEN1-223ENST00000557511 IL34Q6ZMJ4 242 aa6.32□□□□□ -1.4
PSEN1-223ENST00000557511 OR1S2Q8NGQ3 325 aa6.32□□□□□ -1.4
PSEN1-223ENST00000557511 OR4X1Q8NH49 305 aa6.32□□□□□ -1.4
PSEN1-223ENST00000557511 Q8WTZ3 238 aa6.32□□□□□ -1.4
PSEN1-223ENST00000557511 CHRDL1Q9BU40 450 aa6.32□□□□□ -1.4
PSEN1-223ENST00000557511 NUDT15Q9NV35 164 aa6.32□□□□□ -1.4
PSEN1-223ENST00000557511 PFDN2Q9UHV9 154 aa6.32□□□□□ -1.4
PSEN1-223ENST00000557511 TRAV14DV4A0A0A6YYC5 116 aa6.31□□□□□ -1.4
PSEN1-223ENST00000557511 TMEM213A2RRL7 107 aa6.31□□□□□ -1.4
PSEN1-223ENST00000557511 FAM25EA8MYX2 175 aa6.31□□□□□ -1.4
PSEN1-223ENST00000557511 ADAP1O75689 374 aa6.31□□□□□ -1.4
PSEN1-223ENST00000557511 TMEM50AO95807 157 aa6.31□□□□□ -1.4
PSEN1-223ENST00000557511 SCGB1D2O95969 90 aa6.31□□□□□ -1.4
PSEN1-223ENST00000557511 CD5P06127 495 aa6.31□□□□□ -1.4
PSEN1-223ENST00000557511 NHLRC4P0CG21 123 aaPredicted RBP6.31□□□□□ -1.4
PSEN1-223ENST00000557511 BTCP35070 178 aa6.31□□□□□ -1.4
PSEN1-223ENST00000557511 NKX2-1P43699 371 aaPredicted RBP6.31□□□□□ -1.4
PSEN1-223ENST00000557511 RND2P52198 227 aa6.31□□□□□ -1.4
PSEN1-223ENST00000557511 CD81P60033 236 aa6.31□□□□□ -1.4
PSEN1-223ENST00000557511 PAFAH1B2P68402 229 aa6.31□□□□□ -1.4
PSEN1-223ENST00000557511 ASAH1Q13510 395 aa6.31□□□□□ -1.4
PSEN1-223ENST00000557511 ZNF124Q15973 351 aa6.31□□□□□ -1.4
PSEN1-223ENST00000557511 IAH1Q2TAA2 248 aaPredicted RBP6.31□□□□□ -1.4
PSEN1-223ENST00000557511 BSXQ3C1V8 233 aa6.31□□□□□ -1.4
PSEN1-223ENST00000557511 PVRIGQ6DKI7 326 aa6.31□□□□□ -1.4
PSEN1-223ENST00000557511 UNQ9165/PRO28630Q6UXU0 137 aa6.31□□□□□ -1.4
PSEN1-223ENST00000557511 OR52B4Q8NGK2 314 aa6.31□□□□□ -1.4
PSEN1-223ENST00000557511 ZNF431Q8TF32 576 aaPredicted RBP6.31□□□□□ -1.4
PSEN1-223ENST00000557511 MITD1Q8WV92 249 aa6.31□□□□□ -1.4
PSEN1-223ENST00000557511 CACNG8Q8WXS5 425 aa6.31□□□□□ -1.4
PSEN1-223ENST00000557511 ACY3Q96HD9 319 aa6.31□□□□□ -1.4
PSEN1-223ENST00000557511 GRAMD2BQ96HH9 432 aa6.31□□□□□ -1.4
PSEN1-223ENST00000557511 B9D2Q9BPU9 175 aa6.31□□□□□ -1.4
PSEN1-223ENST00000557511 GSKIPQ9P0R6 139 aa6.31□□□□□ -1.4
PSEN1-223ENST00000557511 STRAPQ9Y3F4 350 aaKnown RBP6.31□□□□□ -1.4
PSEN1-223ENST00000557511 PUS1Q9Y606 427 aaKnown RBP eCLIP6.31□□□□□ -1.4
PSEN1-223ENST00000557511 CMYA5Q8N3K9 4069 aa6.31□□□□□ -1.4
PSEN1-223ENST00000557511 C5orf51A6NDU8 294 aa6.3□□□□□ -1.4
PSEN1-223ENST00000557511 OR4C46A6NHA9 309 aa6.3□□□□□ -1.4
PSEN1-223ENST00000557511 ZFP92A6NM28 416 aa6.3□□□□□ -1.4
PSEN1-223ENST00000557511 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.3□□□□□ -1.4
PSEN1-223ENST00000557511 L7N2F9 121 aa6.3□□□□□ -1.4
PSEN1-223ENST00000557511 ZNF207O43670 478 aaKnown RBP6.3□□□□□ -1.4
PSEN1-223ENST00000557511 PITX3O75364 302 aa6.3□□□□□ -1.4
PSEN1-223ENST00000557511 SCAF4O95104 1147 aaKnown RBP6.3□□□□□ -1.4
PSEN1-223ENST00000557511 ATF4P18848 351 aaPredicted RBP6.3□□□□□ -1.4
PSEN1-223ENST00000557511 NPPCP23582 126 aa6.3□□□□□ -1.4
PSEN1-223ENST00000557511 OR10J1P30954 320 aa6.3□□□□□ -1.4
PSEN1-223ENST00000557511 S100A7P31151 101 aa6.3□□□□□ -1.4
PSEN1-223ENST00000557511 GPX4P36969 197 aaPredicted RBP6.3□□□□□ -1.4
PSEN1-223ENST00000557511 EIF2B2P49770 351 aaKnown RBP6.3□□□□□ -1.4
PSEN1-223ENST00000557511 CMC4P56277 68 aaPredicted RBP6.3□□□□□ -1.4
PSEN1-223ENST00000557511 VAMP2P63027 116 aa6.3□□□□□ -1.4
PSEN1-223ENST00000557511 SPANXN5Q5MJ07 72 aa6.3□□□□□ -1.4
PSEN1-223ENST00000557511 C12orf45Q8N5I9 185 aaPredicted RBP6.3□□□□□ -1.4
PSEN1-223ENST00000557511 TMEM116Q8NCL8 245 aa6.3□□□□□ -1.4
PSEN1-223ENST00000557511 METTL26Q96S19 204 aa6.3□□□□□ -1.4
PSEN1-223ENST00000557511 NEURL2Q9BR09 285 aa6.3□□□□□ -1.4
PSEN1-223ENST00000557511 MAGT1Q9H0U3 335 aa6.3□□□□□ -1.4
PSEN1-223ENST00000557511 ZMAT4Q9H898 229 aa6.3□□□□□ -1.4
PSEN1-223ENST00000557511 AP5S1Q9NUS5 200 aa6.3□□□□□ -1.4
PSEN1-223ENST00000557511 LSM4Q9Y4Z0 139 aaKnown RBP6.3□□□□□ -1.4
PSEN1-223ENST00000557511 IGHV3OR16-8A0A075B7F1 116 aa6.29□□□□□ -1.4
PSEN1-223ENST00000557511 IGHV7-4-1A0A0J9YVY3 117 aa6.29□□□□□ -1.4
PSEN1-223ENST00000557511 KRTAP9-6A0A140TA67 174 aa6.29□□□□□ -1.4
PSEN1-223ENST00000557511 DNASE2O00115 360 aaPredicted RBP6.29□□□□□ -1.4
PSEN1-223ENST00000557511 PRAF2O60831 178 aa6.29□□□□□ -1.4
PSEN1-223ENST00000557511 RD3LP0DJH9 198 aa6.29□□□□□ -1.4
PSEN1-223ENST00000557511 C8orf88P0DMB2 117 aa6.29□□□□□ -1.4
PSEN1-223ENST00000557511 PVALBP20472 110 aaPredicted RBP6.29□□□□□ -1.4
PSEN1-223ENST00000557511 NUP62P37198 522 aaPredicted RBP6.29□□□□□ -1.4
PSEN1-223ENST00000557511 RPL11P62913 178 aaKnown RBP6.29□□□□□ -1.4
PSEN1-223ENST00000557511 TIGITQ495A1 244 aa6.29□□□□□ -1.4
PSEN1-223ENST00000557511 PRSS54Q6PEW0 395 aa6.29□□□□□ -1.4
PSEN1-223ENST00000557511 TOMM20LQ6UXN7 152 aa6.29□□□□□ -1.4
PSEN1-223ENST00000557511 GSG1LQ6UXU4 331 aa6.29□□□□□ -1.4
PSEN1-223ENST00000557511 TMEM61Q8N0U2 210 aa6.29□□□□□ -1.4
PSEN1-223ENST00000557511 NPIPB3Q92617 1050 aa6.29□□□□□ -1.4
PSEN1-223ENST00000557511 RAB40CQ96S21 281 aa6.29□□□□□ -1.4
PSEN1-223ENST00000557511 SPAG8Q99932 426 aaPredicted RBP6.29□□□□□ -1.4
PSEN1-223ENST00000557511 RHPN1-AS1Q9BWJ2 59 aa6.29□□□□□ -1.4
PSEN1-223ENST00000557511 FNDC4Q9H6D8 234 aaPredicted RBP6.29□□□□□ -1.4
PSEN1-223ENST00000557511 PSENENQ9NZ42 101 aa6.29□□□□□ -1.4
PSEN1-223ENST00000557511 MLXQ9UH92 298 aa6.29□□□□□ -1.4
PSEN1-223ENST00000557511 SMPXQ9UHP9 88 aa6.29□□□□□ -1.4
PSEN1-223ENST00000557511 SMCO3A2RU48 225 aa6.28□□□□□ -1.4
PSEN1-223ENST00000557511 IZUMO1RA6ND01 250 aa6.28□□□□□ -1.4
PSEN1-223ENST00000557511 OR11H12B2RN74 326 aa6.28□□□□□ -1.4
PSEN1-223ENST00000557511 INMT-MINDY4F8WBC2 141 aa6.28□□□□□ -1.4
PSEN1-223ENST00000557511 TSPAN4O14817 238 aa6.28□□□□□ -1.4
PSEN1-223ENST00000557511 SSSCA1O60232 199 aa6.28□□□□□ -1.4
PSEN1-223ENST00000557511 IL5P05113 134 aa6.28□□□□□ -1.4
PSEN1-223ENST00000557511 IGHV4-30-4P0DP06 118 aa6.28□□□□□ -1.4
PSEN1-223ENST00000557511 BCAP31P51572 246 aa6.28□□□□□ -1.4
PSEN1-223ENST00000557511 YPEL3P61236 119 aaPredicted RBP6.28□□□□□ -1.4
PSEN1-223ENST00000557511 POLR2GP62487 172 aaKnown RBP eCLIP6.28□□□□□ -1.4
PSEN1-223ENST00000557511 AKR1C1Q04828 323 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms