RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 PAXXQ9BUH6 204 aa14.26□□□□□ -0.13
XRCC3-218ENST00000557439 SNHG12Q9BXW3 62 aa14.26□□□□□ -0.13
XRCC3-218ENST00000557439 DYNLRB1Q9NP97 96 aa14.26□□□□□ -0.13
XRCC3-218ENST00000557439 C22orf46C9J442 243 aa14.25□□□□□ -0.13
XRCC3-218ENST00000557439 TPPP2P59282 170 aa14.25□□□□□ -0.13
XRCC3-218ENST00000557439 LEMD1Q68G75 181 aa14.25□□□□□ -0.13
XRCC3-218ENST00000557439 WASHC3Q9Y3C0 194 aa14.25□□□□□ -0.13
XRCC3-218ENST00000557439 PAM16Q9Y3D7 125 aa14.25□□□□□ -0.13
XRCC3-218ENST00000557439 AMMECR1Q9Y4X0 333 aaPredicted RBP14.25□□□□□ -0.13
XRCC3-218ENST00000557439 E7EQL1 145 aa14.25□□□□□ -0.13
XRCC3-218ENST00000557439 ISLRO14498 428 aa14.25□□□□□ -0.13
XRCC3-218ENST00000557439 TAS2R60P59551 318 aa14.25□□□□□ -0.13
XRCC3-218ENST00000557439 PRSS33Q8NF86 280 aa14.25□□□□□ -0.13
XRCC3-218ENST00000557439 CACNG8Q8WXS5 425 aa14.25□□□□□ -0.13
XRCC3-218ENST00000557439 OSTCQ9NRP0 149 aa14.25□□□□□ -0.13
XRCC3-218ENST00000557439 CORTO00230 105 aa14.24□□□□□ -0.13
XRCC3-218ENST00000557439 TNFRSF13BO14836 293 aaPredicted RBP14.24□□□□□ -0.13
XRCC3-218ENST00000557439 SRIP30626 198 aa14.24□□□□□ -0.13
XRCC3-218ENST00000557439 TMEM30BQ3MIR4 351 aa14.24□□□□□ -0.13
XRCC3-218ENST00000557439 C1orf194Q5T5A4 169 aa14.24□□□□□ -0.13
XRCC3-218ENST00000557439 TPTE2P1Q5T6R2 138 aa14.24□□□□□ -0.13
XRCC3-218ENST00000557439 LINC00305Q7Z4B0 112 aa14.24□□□□□ -0.13
XRCC3-218ENST00000557439 C11orf42Q8N5U0 333 aa14.24□□□□□ -0.13
XRCC3-218ENST00000557439 FBXL7Q9UJT9 491 aa14.24□□□□□ -0.13
XRCC3-218ENST00000557439 PMCHP20382 165 aa14.24□□□□□ -0.13
XRCC3-218ENST00000557439 DLX6P56179 175 aa14.24□□□□□ -0.13
XRCC3-218ENST00000557439 ZNF329Q86UD4 541 aa14.24□□□□□ -0.13
XRCC3-218ENST00000557439 PDPNQ86YL7 162 aa14.24□□□□□ -0.13
XRCC3-218ENST00000557439 OR1B1Q8NGR6 318 aa14.24□□□□□ -0.13
XRCC3-218ENST00000557439 C2orf88Q9BSF0 95 aa14.24□□□□□ -0.13
XRCC3-218ENST00000557439 GNB1LQ9BYB4 327 aa14.24□□□□□ -0.13
XRCC3-218ENST00000557439 ARL2-SNX15V9GYD0 113 aa14.24□□□□□ -0.13
XRCC3-218ENST00000557439 SPTA1P02549 2419 aa14.24□□□□□ -0.13
XRCC3-218ENST00000557439 TRAV9-1A0A075B6T8 112 aa14.23□□□□□ -0.13
XRCC3-218ENST00000557439 A0A1W2PN81 502 aa14.23□□□□□ -0.13
XRCC3-218ENST00000557439 TCRBV4S1A1TA0A5B7 111 aa14.23□□□□□ -0.13
XRCC3-218ENST00000557439 ZNF841Q6ZN19 808 aa14.23□□□□□ -0.13
XRCC3-218ENST00000557439 SHISA9B4DS77 424 aa14.23□□□□□ -0.13
XRCC3-218ENST00000557439 BMPR1BO00238 502 aa14.23□□□□□ -0.13
XRCC3-218ENST00000557439 FSTL3O95633 263 aa14.23□□□□□ -0.13
XRCC3-218ENST00000557439 IGHV1-8P0DP01 117 aa14.23□□□□□ -0.13
XRCC3-218ENST00000557439 KRTDAPP60985 99 aa14.23□□□□□ -0.13
XRCC3-218ENST00000557439 TNXAQ16473 311 aa14.23□□□□□ -0.13
XRCC3-218ENST00000557439 FAM19A2Q8N3H0 131 aa14.23□□□□□ -0.13
XRCC3-218ENST00000557439 PNKDQ8N490 385 aa14.23□□□□□ -0.13
XRCC3-218ENST00000557439 TMEM186Q96B77 213 aa14.23□□□□□ -0.13
XRCC3-218ENST00000557439 FXYD5Q96DB9 178 aa14.23□□□□□ -0.13
XRCC3-218ENST00000557439 MRPL32Q9BYC8 188 aaKnown RBP14.23□□□□□ -0.13
XRCC3-218ENST00000557439 CDC42EP3Q9UKI2 254 aa14.23□□□□□ -0.13
XRCC3-218ENST00000557439 SLAQ13239 276 aa14.22□□□□□ -0.13
XRCC3-218ENST00000557439 BEND2Q8NDZ0 799 aa14.22□□□□□ -0.13
XRCC3-218ENST00000557439 C19orf24Q9BVV8 132 aa14.22□□□□□ -0.13
XRCC3-218ENST00000557439 KIR2DL5BA0A0G2JN68 375 aa14.22□□□□□ -0.13
XRCC3-218ENST00000557439 KIR2DL5BA0A0G2JPC4 375 aa14.22□□□□□ -0.13
XRCC3-218ENST00000557439 TMEM155Q4W5P6 130 aa14.22□□□□□ -0.13
XRCC3-218ENST00000557439 ZNF705AQ6ZN79 300 aaPredicted RBP14.22□□□□□ -0.13
XRCC3-218ENST00000557439 KIR2DL5AQ8N109 375 aa14.22□□□□□ -0.13
XRCC3-218ENST00000557439 IGLC7A0M8Q6 106 aa14.21□□□□□ -0.13
XRCC3-218ENST00000557439 PEX7O00628 323 aa14.21□□□□□ -0.13
XRCC3-218ENST00000557439 ZNF253O75346 499 aa14.21□□□□□ -0.13
XRCC3-218ENST00000557439 COMPP49747 757 aaPredicted RBP14.21□□□□□ -0.13
XRCC3-218ENST00000557439 VSTM2AQ8TAG5 236 aa14.21□□□□□ -0.13
XRCC3-218ENST00000557439 TBL2Q9Y4P3 447 aaKnown RBP14.21□□□□□ -0.13
XRCC3-218ENST00000557439 ASH1LQ9NR48 2969 aaKnown RBP14.21□□□□□ -0.13
XRCC3-218ENST00000557439 SMIM27A0A1W2PRY6 76 aa14.21□□□□□ -0.14
XRCC3-218ENST00000557439 ATP5IP56385 69 aaPredicted RBP14.21□□□□□ -0.14
XRCC3-218ENST00000557439 GDF5OSQ5U4N7 250 aa14.21□□□□□ -0.14
XRCC3-218ENST00000557439 Q71RC1 249 aaPredicted RBP14.21□□□□□ -0.14
XRCC3-218ENST00000557439 SSBP4Q9BWG4 385 aaPredicted RBP14.21□□□□□ -0.14
XRCC3-218ENST00000557439 TNFRSF19Q9NS68 423 aa14.21□□□□□ -0.14
XRCC3-218ENST00000557439 SSUH2Q9Y2M2 353 aa14.21□□□□□ -0.14
XRCC3-218ENST00000557439 COX7A1P24310 79 aa14.2□□□□□ -0.14
XRCC3-218ENST00000557439 GPR6P46095 362 aaPredicted RBP14.2□□□□□ -0.14
XRCC3-218ENST00000557439 AMTP48728 403 aa14.2□□□□□ -0.14
XRCC3-218ENST00000557439 PAFAH1B2P68402 229 aa14.2□□□□□ -0.14
XRCC3-218ENST00000557439 Q0VG73 95 aa14.2□□□□□ -0.14
XRCC3-218ENST00000557439 VMA21Q3ZAQ7 101 aa14.2□□□□□ -0.14
XRCC3-218ENST00000557439 TOX4O94842 621 aa14.2□□□□□ -0.14
XRCC3-218ENST00000557439 AMY1AP04745 511 aa14.2□□□□□ -0.14
XRCC3-218ENST00000557439 FAM87AP0C7U9 286 aa14.2□□□□□ -0.14
XRCC3-218ENST00000557439 ESDP10768 282 aa14.2□□□□□ -0.14
XRCC3-218ENST00000557439 NUDT10Q8NFP7 164 aa14.2□□□□□ -0.14
XRCC3-218ENST00000557439 NUDT11Q96G61 164 aa14.2□□□□□ -0.14
XRCC3-218ENST00000557439 A0A1W2PS18 150 aa14.19□□□□□ -0.14
XRCC3-218ENST00000557439 GPX1P07203 203 aa14.19□□□□□ -0.14
XRCC3-218ENST00000557439 SIGLECL1Q8N7X8 197 aa14.19□□□□□ -0.14
XRCC3-218ENST00000557439 TMEM133Q9H2Q1 129 aa14.19□□□□□ -0.14
XRCC3-218ENST00000557439 SUB1P53999 127 aaKnown RBP eCLIP14.19□□□□□ -0.14
XRCC3-218ENST00000557439 BPIFB3P59826 476 aa14.19□□□□□ -0.14
XRCC3-218ENST00000557439 LINC01560Q8TB33 94 aa14.19□□□□□ -0.14
XRCC3-218ENST00000557439 JKAMPQ9P055 326 aa14.19□□□□□ -0.14
XRCC3-218ENST00000557439 PTPRQQ9UMZ3 2332 aa14.18□□□□□ -0.14
XRCC3-218ENST00000557439 IGHV1-69-2A0A0G2JMI3 117 aa14.18□□□□□ -0.14
XRCC3-218ENST00000557439 PGPA6NDG6 321 aa14.18□□□□□ -0.14
XRCC3-218ENST00000557439 VWC2LB2RUY7 222 aa14.18□□□□□ -0.14
XRCC3-218ENST00000557439 LY6HO94772 140 aa14.18□□□□□ -0.14
XRCC3-218ENST00000557439 SLC25A5P05141 298 aaKnown RBP14.18□□□□□ -0.14
XRCC3-218ENST00000557439 NTF3P20783 257 aa14.18□□□□□ -0.14
XRCC3-218ENST00000557439 CD24P25063 80 aa14.18□□□□□ -0.14
XRCC3-218ENST00000557439 GRNP28799 593 aaKnown RBP14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms