RNA–Protein interactions for RNA: ENST00000557348.5

SHMT2-229, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,659 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-229ENST00000557348 ATG101Q9BSB4 218 aa10.19□□□□□ -0.78
SHMT2-229ENST00000557348 SLC45A2Q9UMX9 530 aa10.19□□□□□ -0.78
SHMT2-229ENST00000557348 RFNGQ9Y644 331 aa10.19□□□□□ -0.78
SHMT2-229ENST00000557348 A0A0U1RQK1 487 aa10.18□□□□□ -0.78
SHMT2-229ENST00000557348 ZNF320A2RRD8 509 aa10.18□□□□□ -0.78
SHMT2-229ENST00000557348 ODF3BA8MYP8 253 aa10.18□□□□□ -0.78
SHMT2-229ENST00000557348 ARF6P62330 175 aa10.18□□□□□ -0.78
SHMT2-229ENST00000557348 COTL1Q14019 142 aa10.18□□□□□ -0.78
SHMT2-229ENST00000557348 DIAPH2-AS1Q14236 149 aa10.18□□□□□ -0.78
SHMT2-229ENST00000557348 FFAR4Q5NUL3 377 aa10.18□□□□□ -0.78
SHMT2-229ENST00000557348 TREML4Q6UXN2 200 aa10.18□□□□□ -0.78
SHMT2-229ENST00000557348 OR5AU1Q8NGC0 362 aa10.18□□□□□ -0.78
SHMT2-229ENST00000557348 OR10G9Q8NGN4 311 aa10.18□□□□□ -0.78
SHMT2-229ENST00000557348 OR10G7Q8NGN6 311 aa10.18□□□□□ -0.78
SHMT2-229ENST00000557348 RPUSD4Q96CM3 377 aaKnown RBP10.18□□□□□ -0.78
SHMT2-229ENST00000557348 PIMREGQ9BSJ6 248 aa10.18□□□□□ -0.78
SHMT2-229ENST00000557348 ABCA4P78363 2273 aa10.18□□□□□ -0.78
SHMT2-229ENST00000557348 MDFIC2A0A1B0GVS7 189 aa10.18□□□□□ -0.78
SHMT2-229ENST00000557348 SLC25A17O43808 307 aa10.18□□□□□ -0.78
SHMT2-229ENST00000557348 ARSJQ5FYB0 599 aaPredicted RBP10.18□□□□□ -0.78
SHMT2-229ENST00000557348 WDR73Q6P4I2 378 aa10.18□□□□□ -0.78
SHMT2-229ENST00000557348 ZNF430Q9H8G1 570 aaPredicted RBP10.18□□□□□ -0.78
SHMT2-229ENST00000557348 UQCR10Q9UDW1 63 aa10.18□□□□□ -0.78
SHMT2-229ENST00000557348 CDC42EP3Q9UKI2 254 aa10.18□□□□□ -0.78
SHMT2-229ENST00000557348 TBL2Q9Y4P3 447 aaKnown RBP10.18□□□□□ -0.78
SHMT2-229ENST00000557348 LSM4Q9Y4Z0 139 aaKnown RBP10.18□□□□□ -0.78
SHMT2-229ENST00000557348 IGHV2-70DA0A0C4DH43 119 aa10.17□□□□□ -0.78
SHMT2-229ENST00000557348 A0A1W2PPI3 338 aa10.17□□□□□ -0.78
SHMT2-229ENST00000557348 RNASE2P10153 161 aaKnown RBP10.17□□□□□ -0.78
SHMT2-229ENST00000557348 PRSS8Q16651 343 aa10.17□□□□□ -0.78
SHMT2-229ENST00000557348 OR10J3Q5JRS4 329 aa10.17□□□□□ -0.78
SHMT2-229ENST00000557348 CYB5R2Q6BCY4 276 aa10.17□□□□□ -0.78
SHMT2-229ENST00000557348 SLC35E1Q96K37 410 aa10.17□□□□□ -0.78
SHMT2-229ENST00000557348 VSIRQ9H7M9 311 aa10.17□□□□□ -0.78
SHMT2-229ENST00000557348 ZNF586Q9NXT0 402 aa10.17□□□□□ -0.78
SHMT2-229ENST00000557348 MALRD1Q5VYJ5 2156 aa10.16□□□□□ -0.78
SHMT2-229ENST00000557348 C11orf94C9JXX5 98 aa10.16□□□□□ -0.78
SHMT2-229ENST00000557348 K7EP13 123 aa10.16□□□□□ -0.78
SHMT2-229ENST00000557348 CORTO00230 105 aa10.16□□□□□ -0.78
SHMT2-229ENST00000557348 FGF8P55075 233 aaPredicted RBP10.16□□□□□ -0.78
SHMT2-229ENST00000557348 LGALS4P56470 323 aa10.16□□□□□ -0.78
SHMT2-229ENST00000557348 DSCR9P59020 149 aa10.16□□□□□ -0.78
SHMT2-229ENST00000557348 PSG5Q15238 335 aa10.16□□□□□ -0.78
SHMT2-229ENST00000557348 FAM78BQ5VT40 261 aa10.16□□□□□ -0.78
SHMT2-229ENST00000557348 ETFRF1Q6IPR1 90 aa10.16□□□□□ -0.78
SHMT2-229ENST00000557348 SSX7Q7RTT5 188 aa10.16□□□□□ -0.78
SHMT2-229ENST00000557348 ZNF114Q8NC26 417 aa10.16□□□□□ -0.78
SHMT2-229ENST00000557348 SFRP2Q96HF1 295 aa10.16□□□□□ -0.78
SHMT2-229ENST00000557348 C19orf24Q9BVV8 132 aa10.16□□□□□ -0.78
SHMT2-229ENST00000557348 BPESC1Q9GZL8 116 aa10.16□□□□□ -0.78
SHMT2-229ENST00000557348 SIGLEC9Q9Y336 463 aa10.16□□□□□ -0.78
SHMT2-229ENST00000557348 C9JCJ5 164 aa10.15□□□□□ -0.78
SHMT2-229ENST00000557348 NDUFS7O75251 213 aa10.15□□□□□ -0.78
SHMT2-229ENST00000557348 IGHV4-39P01824 125 aa10.15□□□□□ -0.78
SHMT2-229ENST00000557348 CRYGBP07316 175 aa10.15□□□□□ -0.78
SHMT2-229ENST00000557348 CRISP2P16562 243 aa10.15□□□□□ -0.78
SHMT2-229ENST00000557348 RPL27AP46776 148 aaKnown RBP10.15□□□□□ -0.78
SHMT2-229ENST00000557348 CDC34P49427 236 aaPredicted RBP10.15□□□□□ -0.78
SHMT2-229ENST00000557348 ACSM6Q6P461 480 aa10.15□□□□□ -0.78
SHMT2-229ENST00000557348 CLEC2AQ6UVW9 174 aa10.15□□□□□ -0.78
SHMT2-229ENST00000557348 VMO1Q7Z5L0 202 aa10.15□□□□□ -0.78
SHMT2-229ENST00000557348 PPP1R27Q86WC6 154 aa10.15□□□□□ -0.78
SHMT2-229ENST00000557348 NECAP1Q8NC96 275 aa10.15□□□□□ -0.78
SHMT2-229ENST00000557348 GNB1LQ9BYB4 327 aa10.15□□□□□ -0.78
SHMT2-229ENST00000557348 SIRPDQ9H106 197 aa10.15□□□□□ -0.78
SHMT2-229ENST00000557348 MRPS16Q9Y3D3 137 aaKnown RBP10.15□□□□□ -0.78
SHMT2-229ENST00000557348 SPTBN1Q01082 2364 aaKnown RBP10.15□□□□□ -0.78
SHMT2-229ENST00000557348 A0A1W2PPV4 95 aa10.15□□□□□ -0.79
SHMT2-229ENST00000557348 MT-CO2P00403 227 aa10.15□□□□□ -0.79
SHMT2-229ENST00000557348 NPSP0C0P6 89 aa10.15□□□□□ -0.79
SHMT2-229ENST00000557348 LMO4P61968 165 aa10.15□□□□□ -0.79
SHMT2-229ENST00000557348 PAX2Q02962 417 aa10.15□□□□□ -0.79
SHMT2-229ENST00000557348 CD69Q07108 199 aa10.15□□□□□ -0.79
SHMT2-229ENST00000557348 PET117Q6UWS5 81 aa10.15□□□□□ -0.79
SHMT2-229ENST00000557348 C19orf35Q6ZS72 473 aa10.15□□□□□ -0.79
SHMT2-229ENST00000557348 FAM168AQ92567 244 aa10.15□□□□□ -0.79
SHMT2-229ENST00000557348 GGTLC1Q9BX51 225 aa10.15□□□□□ -0.79
SHMT2-229ENST00000557348 GSX1Q9H4S2 264 aaPredicted RBP10.15□□□□□ -0.79
SHMT2-229ENST00000557348 IL36BQ9NZH7 164 aa10.15□□□□□ -0.79
SHMT2-229ENST00000557348 IGHV3-72A0A0B4J1Y9 119 aa10.14□□□□□ -0.79
SHMT2-229ENST00000557348 TIMM23O14925 209 aa10.14□□□□□ -0.79
SHMT2-229ENST00000557348 TOX4O94842 621 aa10.14□□□□□ -0.79
SHMT2-229ENST00000557348 TOMM40O96008 361 aa10.14□□□□□ -0.79
SHMT2-229ENST00000557348 MOSP00540 346 aa10.14□□□□□ -0.79
SHMT2-229ENST00000557348 CDKN1BP46527 198 aa10.14□□□□□ -0.79
SHMT2-229ENST00000557348 UBE2E1P51965 193 aa10.14□□□□□ -0.79
SHMT2-229ENST00000557348 PMCHL1Q16048 86 aa10.14□□□□□ -0.79
SHMT2-229ENST00000557348 LEMD1Q68G75 181 aa10.14□□□□□ -0.79
SHMT2-229ENST00000557348 NPBQ8NG41 125 aa10.14□□□□□ -0.79
SHMT2-229ENST00000557348 OR10G8Q8NGN5 311 aa10.14□□□□□ -0.79
SHMT2-229ENST00000557348 OR1L6Q8NGR2 347 aa10.14□□□□□ -0.79
SHMT2-229ENST00000557348 SGMS2Q8NHU3 365 aa10.14□□□□□ -0.79
SHMT2-229ENST00000557348 C22orf15Q8WYQ4 148 aa10.14□□□□□ -0.79
SHMT2-229ENST00000557348 MGST2Q99735 147 aa10.14□□□□□ -0.79
SHMT2-229ENST00000557348 ELOVL1Q9BW60 279 aa10.14□□□□□ -0.79
SHMT2-229ENST00000557348 TENM4Q6N022 2769 aa10.14□□□□□ -0.79
SHMT2-229ENST00000557348 HMGB3O15347 200 aaKnown RBP10.13□□□□□ -0.79
SHMT2-229ENST00000557348 PAGE4O60829 102 aa10.13□□□□□ -0.79
SHMT2-229ENST00000557348 OR10J4P0C629 311 aa10.13□□□□□ -0.79
SHMT2-229ENST00000557348 COX6B1P14854 86 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 133.8 ms