RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 C10orf55Q5SWW7 151 aa2.43□□□□□ -2.02
CHD8-212ENST00000557329 LCE1CQ5T751 118 aa2.43□□□□□ -2.02
CHD8-212ENST00000557329 LCE1BQ5T7P3 118 aa2.43□□□□□ -2.02
CHD8-212ENST00000557329 GLT8D1Q68CQ7 371 aa2.43□□□□□ -2.02
CHD8-212ENST00000557329 RAB12Q6IQ22 244 aa2.43□□□□□ -2.02
CHD8-212ENST00000557329 UFSP1Q6NVU6 142 aa2.43□□□□□ -2.02
CHD8-212ENST00000557329 UTS2BQ765I0 119 aa2.43□□□□□ -2.02
CHD8-212ENST00000557329 SSX7Q7RTT5 188 aa2.43□□□□□ -2.02
CHD8-212ENST00000557329 SSX6Q7RTT6 188 aa2.43□□□□□ -2.02
CHD8-212ENST00000557329 CCDC54Q8NEL0 328 aa2.43□□□□□ -2.02
CHD8-212ENST00000557329 OR10G2Q8NGC3 310 aa2.43□□□□□ -2.02
CHD8-212ENST00000557329 OR51A4Q8NGJ6 313 aa2.43□□□□□ -2.02
CHD8-212ENST00000557329 GIPC3Q8TF64 312 aa2.43□□□□□ -2.02
CHD8-212ENST00000557329 C10orf35Q96D05 121 aa2.43□□□□□ -2.02
CHD8-212ENST00000557329 NSMCE2Q96MF7 247 aa2.43□□□□□ -2.02
CHD8-212ENST00000557329 YPEL2Q96QA6 119 aa2.43□□□□□ -2.02
CHD8-212ENST00000557329 OR2A7Q96R45 310 aa2.43□□□□□ -2.02
CHD8-212ENST00000557329 IL4I1Q96RQ9 567 aa2.43□□□□□ -2.02
CHD8-212ENST00000557329 SPIN2AQ99865 258 aa2.43□□□□□ -2.02
CHD8-212ENST00000557329 HOPXQ9BPY8 73 aaPredicted RBP2.43□□□□□ -2.02
CHD8-212ENST00000557329 SPIN2BQ9BPZ2 258 aa2.43□□□□□ -2.02
CHD8-212ENST00000557329 C7orf50Q9BRJ6 194 aaKnown RBP2.43□□□□□ -2.02
CHD8-212ENST00000557329 SELENOIQ9C0D9 397 aa2.43□□□□□ -2.02
CHD8-212ENST00000557329 BANF2Q9H503 90 aa2.43□□□□□ -2.02
CHD8-212ENST00000557329 EFCAB1Q9HAE3 211 aa2.43□□□□□ -2.02
CHD8-212ENST00000557329 CLN6Q9NWW5 311 aa2.43□□□□□ -2.02
CHD8-212ENST00000557329 ZNF586Q9NXT0 402 aa2.43□□□□□ -2.02
CHD8-212ENST00000557329 SMPD3Q9NY59 655 aaPredicted RBP2.43□□□□□ -2.02
CHD8-212ENST00000557329 IL36GQ9NZH8 169 aa2.43□□□□□ -2.02
CHD8-212ENST00000557329 GMPPBQ9Y5P6 360 aa2.43□□□□□ -2.02
CHD8-212ENST00000557329 V9GYY5 206 aaPredicted RBP2.43□□□□□ -2.02
CHD8-212ENST00000557329 TRBV7-1A0A0A6YYK4 115 aa2.42□□□□□ -2.02
CHD8-212ENST00000557329 M0R129 80 aa2.42□□□□□ -2.02
CHD8-212ENST00000557329 NDUFAB1O14561 156 aa2.42□□□□□ -2.02
CHD8-212ENST00000557329 CA11O75493 328 aa2.42□□□□□ -2.02
CHD8-212ENST00000557329 CRTAPO75718 401 aaPredicted RBP2.42□□□□□ -2.02
CHD8-212ENST00000557329 CRYZL1O95825 349 aa2.42□□□□□ -2.02
CHD8-212ENST00000557329 DEFB130BP0DP73 79 aa2.42□□□□□ -2.02
CHD8-212ENST00000557329 DEFB130AP0DP74 79 aa2.42□□□□□ -2.02
CHD8-212ENST00000557329 MAS1LP35410 378 aa2.42□□□□□ -2.02
CHD8-212ENST00000557329 ZNF93P35789 620 aaPredicted RBP2.42□□□□□ -2.02
CHD8-212ENST00000557329 CRISP1P54107 249 aa2.42□□□□□ -2.02
CHD8-212ENST00000557329 SNRPGP62308 76 aaKnown RBP2.42□□□□□ -2.02
CHD8-212ENST00000557329 USF2Q15853 346 aaPredicted RBP2.42□□□□□ -2.02
CHD8-212ENST00000557329 PRSS8Q16651 343 aa2.42□□□□□ -2.02
CHD8-212ENST00000557329 RTL8BQ17RB0 113 aa2.42□□□□□ -2.02
CHD8-212ENST00000557329 TNFAIP8L3Q5GJ75 292 aa2.42□□□□□ -2.02
CHD8-212ENST00000557329 TTC32Q5I0X7 151 aa2.42□□□□□ -2.02
CHD8-212ENST00000557329 FAM222AQ5U5X8 452 aa2.42□□□□□ -2.02
CHD8-212ENST00000557329 UBE2UQ5VVX9 321 aa2.42□□□□□ -2.02
CHD8-212ENST00000557329 TTC23Q5W5X9 447 aa2.42□□□□□ -2.02
CHD8-212ENST00000557329 ELP2Q6IA86 826 aa2.42□□□□□ -2.02
CHD8-212ENST00000557329 SLC25A24Q6NUK1 477 aa2.42□□□□□ -2.02
CHD8-212ENST00000557329 MORN3Q6PF18 240 aaPredicted RBP2.42□□□□□ -2.02
CHD8-212ENST00000557329 TCF24Q7RTU0 167 aa2.42□□□□□ -2.02
CHD8-212ENST00000557329 PRSS48Q7RTY5 328 aa2.42□□□□□ -2.02
CHD8-212ENST00000557329 HSD17B13Q7Z5P4 300 aaPredicted RBP2.42□□□□□ -2.02
CHD8-212ENST00000557329 CROCCP2Q86T23 111 aa2.42□□□□□ -2.02
CHD8-212ENST00000557329 PDPNQ86YL7 162 aa2.42□□□□□ -2.02
CHD8-212ENST00000557329 TTC9CQ8N5M4 171 aa2.42□□□□□ -2.02
CHD8-212ENST00000557329 STXBP6Q8NFX7 210 aa2.42□□□□□ -2.02
CHD8-212ENST00000557329 ZNRF2Q8NHG8 242 aa2.42□□□□□ -2.02
CHD8-212ENST00000557329 FAM210BQ96KR6 192 aa2.42□□□□□ -2.02
CHD8-212ENST00000557329 ZNF184Q99676 751 aaPredicted RBP2.42□□□□□ -2.02
CHD8-212ENST00000557329 SULT4A1Q9BR01 284 aa2.42□□□□□ -2.02
CHD8-212ENST00000557329 TMEM109Q9BVC6 243 aa2.42□□□□□ -2.02
CHD8-212ENST00000557329 RHPN1-AS1Q9BWJ2 59 aa2.42□□□□□ -2.02
CHD8-212ENST00000557329 TM2D1Q9BX74 207 aa2.42□□□□□ -2.02
CHD8-212ENST00000557329 IFI27L2Q9H2X8 130 aa2.42□□□□□ -2.02
CHD8-212ENST00000557329 DPH3P1Q9H4G8 78 aa2.42□□□□□ -2.02
CHD8-212ENST00000557329 DAZ1Q9NQZ3 744 aaKnown RBP2.42□□□□□ -2.02
CHD8-212ENST00000557329 PAK1IP1Q9NWT1 392 aaPredicted RBP2.42□□□□□ -2.02
CHD8-212ENST00000557329 TAS2R4Q9NYW5 299 aa2.42□□□□□ -2.02
CHD8-212ENST00000557329 LINC00588Q9Y4M8 146 aa2.42□□□□□ -2.02
CHD8-212ENST00000557329 HMCN2Q8NDA2 5059 aa2.42□□□□□ -2.02
CHD8-212ENST00000557329 NACAE9PAV3 2078 aa2.41□□□□□ -2.02
CHD8-212ENST00000557329 TRAV14DV4A0A0A6YYC5 116 aa2.41□□□□□ -2.02
CHD8-212ENST00000557329 TRBV9A0A0B4J1U6 114 aa2.41□□□□□ -2.02
CHD8-212ENST00000557329 DAPL1A0PJW8 107 aa2.41□□□□□ -2.02
CHD8-212ENST00000557329 CCDC182A6NF36 153 aa2.41□□□□□ -2.02
CHD8-212ENST00000557329 ZNF705EA8MWA4 302 aaPredicted RBP2.41□□□□□ -2.02
CHD8-212ENST00000557329 A8MWP6 167 aa2.41□□□□□ -2.02
CHD8-212ENST00000557329 NUPL2O15504 423 aaKnown RBP2.41□□□□□ -2.02
CHD8-212ENST00000557329 PRKYO43930 277 aa2.41□□□□□ -2.02
CHD8-212ENST00000557329 CREBL2O60519 120 aaPredicted RBP2.41□□□□□ -2.02
CHD8-212ENST00000557329 GPX5O75715 221 aa2.41□□□□□ -2.02
CHD8-212ENST00000557329 DCTN3O75935 186 aa2.41□□□□□ -2.02
CHD8-212ENST00000557329 FAM107AO95990 144 aa2.41□□□□□ -2.02
CHD8-212ENST00000557329 ISG15P05161 165 aa2.41□□□□□ -2.02
CHD8-212ENST00000557329 GLAP06280 429 aa2.41□□□□□ -2.02
CHD8-212ENST00000557329 ZNF688P0C7X2 276 aa2.41□□□□□ -2.02
CHD8-212ENST00000557329 C8orf88P0DMB2 117 aa2.41□□□□□ -2.02
CHD8-212ENST00000557329 COX4I1P13073 169 aa2.41□□□□□ -2.02
CHD8-212ENST00000557329 GALP22466 123 aa2.41□□□□□ -2.02
CHD8-212ENST00000557329 UBE2KP61086 200 aa2.41□□□□□ -2.02
CHD8-212ENST00000557329 NUTF2P61970 127 aaKnown RBP2.41□□□□□ -2.02
CHD8-212ENST00000557329 PPP3R1P63098 170 aa2.41□□□□□ -2.02
CHD8-212ENST00000557329 OR5I1Q13606 314 aa2.41□□□□□ -2.02
CHD8-212ENST00000557329 MPV17LQ2QL34 196 aa2.41□□□□□ -2.02
CHD8-212ENST00000557329 TMEM41BQ5BJD5 291 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms