RNA–Protein interactions for RNA: ENST00000556718.1

PRPF39-210, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-210ENST00000556718 BAXQ07812 192 aa2.66□□□□□ -1.98
PRPF39-210ENST00000556718 CDK5R1Q15078 307 aa2.66□□□□□ -1.98
PRPF39-210ENST00000556718 PMCHL1Q16048 86 aa2.66□□□□□ -1.98
PRPF39-210ENST00000556718 HIST3H3Q16695 136 aa2.66□□□□□ -1.98
PRPF39-210ENST00000556718 ABCA11PQ4W5N1 156 aa2.66□□□□□ -1.98
PRPF39-210ENST00000556718 TMEM128Q5BJH2 165 aa2.66□□□□□ -1.98
PRPF39-210ENST00000556718 SDHAF4Q5VUM1 108 aa2.66□□□□□ -1.98
PRPF39-210ENST00000556718 TOMM20LQ6UXN7 152 aa2.66□□□□□ -1.98
PRPF39-210ENST00000556718 SHISA6Q6ZSJ9 500 aa2.66□□□□□ -1.98
PRPF39-210ENST00000556718 FAM19A1Q7Z5A9 133 aa2.66□□□□□ -1.98
PRPF39-210ENST00000556718 DEFB128Q7Z7B8 93 aa2.66□□□□□ -1.98
PRPF39-210ENST00000556718 GKN2Q86XP6 184 aa2.66□□□□□ -1.98
PRPF39-210ENST00000556718 ZNF695Q8IW36 515 aa2.66□□□□□ -1.98
PRPF39-210ENST00000556718 C20orf196Q8IYI0 205 aa2.66□□□□□ -1.98
PRPF39-210ENST00000556718 SIGLECL1Q8N7X8 197 aa2.66□□□□□ -1.98
PRPF39-210ENST00000556718 NECAP1Q8NC96 275 aa2.66□□□□□ -1.98
PRPF39-210ENST00000556718 OR11H1Q8NG94 326 aa2.66□□□□□ -1.98
PRPF39-210ENST00000556718 OR52R1Q8NGF1 315 aa2.66□□□□□ -1.98
PRPF39-210ENST00000556718 OR2T10Q8NGZ9 312 aa2.66□□□□□ -1.98
PRPF39-210ENST00000556718 OR11H2Q8NH07 326 aa2.66□□□□□ -1.98
PRPF39-210ENST00000556718 OR8S1Q8NH09 359 aa2.66□□□□□ -1.98
PRPF39-210ENST00000556718 OR4X1Q8NH49 305 aa2.66□□□□□ -1.98
PRPF39-210ENST00000556718 CASTOR1Q8WTX7 329 aa2.66□□□□□ -1.98
PRPF39-210ENST00000556718 OR5P2Q8WZ92 322 aa2.66□□□□□ -1.98
PRPF39-210ENST00000556718 SMIM19Q96E16 107 aa2.66□□□□□ -1.98
PRPF39-210ENST00000556718 ZMYND19Q96E35 227 aaPredicted RBP2.66□□□□□ -1.98
PRPF39-210ENST00000556718 NEURL3Q96EH8 262 aa2.66□□□□□ -1.98
PRPF39-210ENST00000556718 LINC00477Q96M19 166 aa2.66□□□□□ -1.98
PRPF39-210ENST00000556718 SPIN2AQ99865 258 aa2.66□□□□□ -1.98
PRPF39-210ENST00000556718 SPIN2BQ9BPZ2 258 aa2.66□□□□□ -1.98
PRPF39-210ENST00000556718 GINS3Q9BRX5 216 aa2.66□□□□□ -1.98
PRPF39-210ENST00000556718 CYTL1Q9NRR1 136 aa2.66□□□□□ -1.98
PRPF39-210ENST00000556718 MRPL27Q9P0M9 148 aaKnown RBP2.66□□□□□ -1.98
PRPF39-210ENST00000556718 SLC23A2Q9UGH3 650 aa2.66□□□□□ -1.98
PRPF39-210ENST00000556718 ARL5AQ9Y689 179 aa2.66□□□□□ -1.98
PRPF39-210ENST00000556718 AHDC1Q5TGY3 1603 aaPredicted RBP2.66□□□□□ -1.98
PRPF39-210ENST00000556718 OTOFQ9HC10 1997 aa2.66□□□□□ -1.98
PRPF39-210ENST00000556718 CACNA1SQ13698 1873 aa2.66□□□□□ -1.98
PRPF39-210ENST00000556718 DOT1LQ8TEK3 1739 aa2.65□□□□□ -1.98
PRPF39-210ENST00000556718 GBF1Q92538 1859 aa2.65□□□□□ -1.98
PRPF39-210ENST00000556718 NRXN3Q9Y4C0 1643 aa2.65□□□□□ -1.98
PRPF39-210ENST00000556718 LTN1O94822 1766 aa2.65□□□□□ -1.99
PRPF39-210ENST00000556718 KCPQ6ZWJ8 1503 aa2.65□□□□□ -1.99
PRPF39-210ENST00000556718 IGHV1-69-2A0A0G2JMI3 117 aa2.65□□□□□ -1.99
PRPF39-210ENST00000556718 A0A1W2PRS3 328 aa2.65□□□□□ -1.99
PRPF39-210ENST00000556718 ZNF727A8MUV8 499 aa2.65□□□□□ -1.99
PRPF39-210ENST00000556718 C9JQL5 133 aa2.65□□□□□ -1.99
PRPF39-210ENST00000556718 J3QRE1 110 aa2.65□□□□□ -1.99
PRPF39-210ENST00000556718 GEMIN2O14893 280 aaKnown RBP2.65□□□□□ -1.99
PRPF39-210ENST00000556718 IGLV2-8P01709 118 aa2.65□□□□□ -1.99
PRPF39-210ENST00000556718 OPN1SWP03999 348 aa2.65□□□□□ -1.99
PRPF39-210ENST00000556718 IGKV3-11P04433 115 aa2.65□□□□□ -1.99
PRPF39-210ENST00000556718 CXCL1P09341 107 aa2.65□□□□□ -1.99
PRPF39-210ENST00000556718 SMIM10L2AP0DMW4 78 aa2.65□□□□□ -1.99
PRPF39-210ENST00000556718 SMIM10L2BP0DMW5 78 aa2.65□□□□□ -1.99
PRPF39-210ENST00000556718 KCNE1P15382 129 aa2.65□□□□□ -1.99
PRPF39-210ENST00000556718 AKR1C4P17516 323 aa2.65□□□□□ -1.99
PRPF39-210ENST00000556718 CKS1BP61024 79 aa2.65□□□□□ -1.99
PRPF39-210ENST00000556718 RHOGP84095 191 aa2.65□□□□□ -1.99
PRPF39-210ENST00000556718 EBI3Q14213 229 aa2.65□□□□□ -1.99
PRPF39-210ENST00000556718 ADIRFQ15847 76 aa2.65□□□□□ -1.99
PRPF39-210ENST00000556718 PLPPR5Q32ZL2 321 aa2.65□□□□□ -1.99
PRPF39-210ENST00000556718 Q499Y3 187 aa2.65□□□□□ -1.99
PRPF39-210ENST00000556718 TRMT12Q53H54 448 aaKnown RBP2.65□□□□□ -1.99
PRPF39-210ENST00000556718 LDLRAD2Q5SZI1 272 aa2.65□□□□□ -1.99
PRPF39-210ENST00000556718 FAM162BQ5T6X4 162 aa2.65□□□□□ -1.99
PRPF39-210ENST00000556718 RPL7L1Q6DKI1 246 aaKnown RBP2.65□□□□□ -1.99
PRPF39-210ENST00000556718 TMPPEQ6ZT21 453 aa2.65□□□□□ -1.99
PRPF39-210ENST00000556718 FAM231DQ6ZW35 169 aa2.65□□□□□ -1.99
PRPF39-210ENST00000556718 TMEM144Q7Z5S9 345 aa2.65□□□□□ -1.99
PRPF39-210ENST00000556718 SELENOHQ8IZQ5 122 aaKnown RBP2.65□□□□□ -1.99
PRPF39-210ENST00000556718 CLECL1Q8IZS7 167 aa2.65□□□□□ -1.99
PRPF39-210ENST00000556718 UMODL1-AS1Q8N2C9 162 aa2.65□□□□□ -1.99
PRPF39-210ENST00000556718 ZNF709Q8N972 641 aa2.65□□□□□ -1.99
PRPF39-210ENST00000556718 TSTD1Q8NFU3 115 aa2.65□□□□□ -1.99
PRPF39-210ENST00000556718 CMTM2Q8TAZ6 248 aa2.65□□□□□ -1.99
PRPF39-210ENST00000556718 FAM213BQ8TBF2 198 aa2.65□□□□□ -1.99
PRPF39-210ENST00000556718 C2orf15Q8WU43 125 aaKnown RBP2.65□□□□□ -1.99
PRPF39-210ENST00000556718 RTN4IP1Q8WWV3 396 aaPredicted RBP2.65□□□□□ -1.99
PRPF39-210ENST00000556718 MAL2Q969L2 176 aa2.65□□□□□ -1.99
PRPF39-210ENST00000556718 GPR82Q96P67 336 aa2.65□□□□□ -1.99
PRPF39-210ENST00000556718 OR2V2Q96R30 315 aa2.65□□□□□ -1.99
PRPF39-210ENST00000556718 PSMG3Q9BT73 122 aaPredicted RBP2.65□□□□□ -1.99
PRPF39-210ENST00000556718 PLEKHF2Q9H8W4 249 aa2.65□□□□□ -1.99
PRPF39-210ENST00000556718 TMEM106BQ9NUM4 274 aa2.65□□□□□ -1.99
PRPF39-210ENST00000556718 OR5V1Q9UGF6 321 aa2.65□□□□□ -1.99
PRPF39-210ENST00000556718 SMPXQ9UHP9 88 aa2.65□□□□□ -1.99
PRPF39-210ENST00000556718 INSIG2Q9Y5U4 225 aa2.65□□□□□ -1.99
PRPF39-210ENST00000556718 URGCP-MRPS24S4R325 110 aa2.65□□□□□ -1.99
PRPF39-210ENST00000556718 NACAE9PAV3 2078 aa2.65□□□□□ -1.99
PRPF39-210ENST00000556718 QSER1Q2KHR3 1735 aa2.65□□□□□ -1.99
PRPF39-210ENST00000556718 DICER1Q9UPY3 1922 aaKnown RBP2.64□□□□□ -1.99
PRPF39-210ENST00000556718 NHSQ6T4R5 1651 aa2.64□□□□□ -1.99
PRPF39-210ENST00000556718 C2orf16Q68DN1 1984 aa2.64□□□□□ -1.99
PRPF39-210ENST00000556718 TRAV9-1A0A075B6T8 112 aa2.64□□□□□ -1.99
PRPF39-210ENST00000556718 LOC102724200A0A096LPH7 203 aaPredicted RBP2.64□□□□□ -1.99
PRPF39-210ENST00000556718 TMEM150BA6NC51 233 aa2.64□□□□□ -1.99
PRPF39-210ENST00000556718 ZNF850A8MQ14 1090 aa2.64□□□□□ -1.99
PRPF39-210ENST00000556718 PRAMEF26H0Y7S4 382 aa2.64□□□□□ -1.99
PRPF39-210ENST00000556718 PDE6DO43924 150 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms