RNA–Protein interactions for RNA: ENST00000556461.1

VTI1B-206, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-206ENST00000556461 RBMS2Q15434 407 aaKnown RBP6.01□□□□□ -1.45
VTI1B-206ENST00000556461 ZFAND6Q6FIF0 208 aa6.01□□□□□ -1.45
VTI1B-206ENST00000556461 TCF24Q7RTU0 167 aa6.01□□□□□ -1.45
VTI1B-206ENST00000556461 APRG1Q8IVJ8 170 aa6.01□□□□□ -1.45
VTI1B-206ENST00000556461 CENPSQ8N2Z9 138 aa6.01□□□□□ -1.45
VTI1B-206ENST00000556461 FAM24BQ8N5W8 94 aa6.01□□□□□ -1.45
VTI1B-206ENST00000556461 LRTM2Q8N967 370 aa6.01□□□□□ -1.45
VTI1B-206ENST00000556461 OR1S1Q8NH92 325 aa6.01□□□□□ -1.45
VTI1B-206ENST00000556461 RNASEH2CQ8TDP1 164 aaKnown RBP6.01□□□□□ -1.45
VTI1B-206ENST00000556461 DTD1Q8TEA8 209 aa6.01□□□□□ -1.45
VTI1B-206ENST00000556461 DEDD2Q8WXF8 326 aa6.01□□□□□ -1.45
VTI1B-206ENST00000556461 NPIPB3Q92617 1050 aa6.01□□□□□ -1.45
VTI1B-206ENST00000556461 GGTLC1Q9BX51 225 aa6.01□□□□□ -1.45
VTI1B-206ENST00000556461 LOC102724200A0A096LPH7 203 aaPredicted RBP6□□□□□ -1.45
VTI1B-206ENST00000556461 DUXBA0A1W2PPF3 345 aa6□□□□□ -1.45
VTI1B-206ENST00000556461 RPS10-NUDT3A0A1W2PQS6 291 aa6□□□□□ -1.45
VTI1B-206ENST00000556461 C9orf170A2RU37 121 aa6□□□□□ -1.45
VTI1B-206ENST00000556461 OR4C46A6NHA9 309 aa6□□□□□ -1.45
VTI1B-206ENST00000556461 MPTX1A8MV57 137 aa6□□□□□ -1.45
VTI1B-206ENST00000556461 PLA2G10O15496 165 aa6□□□□□ -1.45
VTI1B-206ENST00000556461 ADAP1O75689 374 aa6□□□□□ -1.45
VTI1B-206ENST00000556461 RPL35AP18077 110 aaKnown RBP6□□□□□ -1.45
VTI1B-206ENST00000556461 CRYBB3P26998 211 aa6□□□□□ -1.45
VTI1B-206ENST00000556461 OR10J1P30954 320 aa6□□□□□ -1.45
VTI1B-206ENST00000556461 CASC10Q5T4H9 136 aa6□□□□□ -1.45
VTI1B-206ENST00000556461 GGNBP1Q5YKI7 109 aa6□□□□□ -1.45
VTI1B-206ENST00000556461 WFDC3Q8IUB2 231 aa6□□□□□ -1.45
VTI1B-206ENST00000556461 OR1S2Q8NGQ3 325 aa6□□□□□ -1.45
VTI1B-206ENST00000556461 ACY3Q96HD9 319 aa6□□□□□ -1.45
VTI1B-206ENST00000556461 OVOL2Q9BRP0 275 aa6□□□□□ -1.45
VTI1B-206ENST00000556461 GINS3Q9BRX5 216 aa6□□□□□ -1.45
VTI1B-206ENST00000556461 MAGT1Q9H0U3 335 aa6□□□□□ -1.45
VTI1B-206ENST00000556461 MS4A6AQ9H2W1 248 aa6□□□□□ -1.45
VTI1B-206ENST00000556461 NDUFA13Q9P0J0 144 aa6□□□□□ -1.45
VTI1B-206ENST00000556461 U3KQ87 197 aa6□□□□□ -1.45
VTI1B-206ENST00000556461 IGKV1D-37A0A075B6S9 117 aa5.99□□□□□ -1.45
VTI1B-206ENST00000556461 TRAV30A0A087WSZ9 112 aa5.99□□□□□ -1.45
VTI1B-206ENST00000556461 NAP1L6A6NFF2 107 aa5.99□□□□□ -1.45
VTI1B-206ENST00000556461 OR4E1P0C645 316 aa5.99□□□□□ -1.45
VTI1B-206ENST00000556461 SLC25A4P12235 298 aa5.99□□□□□ -1.45
VTI1B-206ENST00000556461 SLC25A6P12236 298 aa5.99□□□□□ -1.45
VTI1B-206ENST00000556461 INPP1P49441 399 aa5.99□□□□□ -1.45
VTI1B-206ENST00000556461 YPEL3P61236 119 aaPredicted RBP5.99□□□□□ -1.45
VTI1B-206ENST00000556461 DHRS2Q13268 280 aa5.99□□□□□ -1.45
VTI1B-206ENST00000556461 GAMTQ14353 236 aa5.99□□□□□ -1.45
VTI1B-206ENST00000556461 USF2Q15853 346 aaPredicted RBP5.99□□□□□ -1.45
VTI1B-206ENST00000556461 MAP6D1Q9H9H5 199 aa5.99□□□□□ -1.45
VTI1B-206ENST00000556461 TMED3Q9Y3Q3 217 aa5.99□□□□□ -1.45
VTI1B-206ENST00000556461 U3KQE9 123 aa5.99□□□□□ -1.45
VTI1B-206ENST00000556461 TOMM40O96008 361 aa5.98□□□□□ -1.45
VTI1B-206ENST00000556461 IFNA4P05014 189 aa5.98□□□□□ -1.45
VTI1B-206ENST00000556461 PSG1P11464 419 aa5.98□□□□□ -1.45
VTI1B-206ENST00000556461 LYL1P12980 280 aa5.98□□□□□ -1.45
VTI1B-206ENST00000556461 NPPCP23582 126 aa5.98□□□□□ -1.45
VTI1B-206ENST00000556461 P2RY1P47900 373 aa5.98□□□□□ -1.45
VTI1B-206ENST00000556461 UBE2MP61081 183 aaKnown RBP5.98□□□□□ -1.45
VTI1B-206ENST00000556461 ZNF90Q03938 601 aa5.98□□□□□ -1.45
VTI1B-206ENST00000556461 LEMD1Q68G75 181 aa5.98□□□□□ -1.45
VTI1B-206ENST00000556461 GSG1LQ6UXU4 331 aa5.98□□□□□ -1.45
VTI1B-206ENST00000556461 LYG2Q86SG7 212 aa5.98□□□□□ -1.45
VTI1B-206ENST00000556461 METTL26Q96S19 204 aa5.98□□□□□ -1.45
VTI1B-206ENST00000556461 CACFD1Q9UGQ2 172 aa5.98□□□□□ -1.45
VTI1B-206ENST00000556461 HYDINQ4G0P3 5121 aa5.97□□□□□ -1.45
VTI1B-206ENST00000556461 IGKV1OR2-108A0A075B7D4 117 aa5.97□□□□□ -1.45
VTI1B-206ENST00000556461 A6NHS1 94 aa5.97□□□□□ -1.45
VTI1B-206ENST00000556461 FAM90A26D6RGX4 464 aa5.97□□□□□ -1.45
VTI1B-206ENST00000556461 PRSS46E5RG02 174 aa5.97□□□□□ -1.45
VTI1B-206ENST00000556461 H3BP45 60 aa5.97□□□□□ -1.45
VTI1B-206ENST00000556461 K7EQG2 157 aa5.97□□□□□ -1.45
VTI1B-206ENST00000556461 DNASE2O00115 360 aaPredicted RBP5.97□□□□□ -1.45
VTI1B-206ENST00000556461 WRBO00258 174 aa5.97□□□□□ -1.45
VTI1B-206ENST00000556461 SYNGR2O43760 224 aa5.97□□□□□ -1.45
VTI1B-206ENST00000556461 IL4P05112 153 aa5.97□□□□□ -1.45
VTI1B-206ENST00000556461 HNRNPCP07910 306 aaKnown RBP eCLIP5.97□□□□□ -1.45
VTI1B-206ENST00000556461 RD3LP0DJH9 198 aa5.97□□□□□ -1.45
VTI1B-206ENST00000556461 GPX4P36969 197 aaPredicted RBP5.97□□□□□ -1.45
VTI1B-206ENST00000556461 DEFB131AP59861 70 aa5.97□□□□□ -1.45
VTI1B-206ENST00000556461 POLR2GP62487 172 aaKnown RBP eCLIP5.97□□□□□ -1.45
VTI1B-206ENST00000556461 RPL11P62913 178 aaKnown RBP5.97□□□□□ -1.45
VTI1B-206ENST00000556461 EWSR1Q01844 656 aaKnown RBP eCLIP5.97□□□□□ -1.45
VTI1B-206ENST00000556461 ID3Q02535 119 aa5.97□□□□□ -1.45
VTI1B-206ENST00000556461 DEFB135Q30KP9 77 aa5.97□□□□□ -1.45
VTI1B-206ENST00000556461 CNPY1Q3B7I2 92 aa5.97□□□□□ -1.45
VTI1B-206ENST00000556461 ETFRF1Q6IPR1 90 aa5.97□□□□□ -1.45
VTI1B-206ENST00000556461 C16orf54Q6UWD8 224 aa5.97□□□□□ -1.45
VTI1B-206ENST00000556461 NOXA1Q86UR1 476 aa5.97□□□□□ -1.45
VTI1B-206ENST00000556461 STPG3Q8N7X2 389 aa5.97□□□□□ -1.45
VTI1B-206ENST00000556461 STXBP6Q8NFX7 210 aa5.97□□□□□ -1.45
VTI1B-206ENST00000556461 OR51G1Q8NGK1 321 aa5.97□□□□□ -1.45
VTI1B-206ENST00000556461 OR4D5Q8NGN0 318 aa5.97□□□□□ -1.45
VTI1B-206ENST00000556461 Q8WTZ3 238 aa5.97□□□□□ -1.45
VTI1B-206ENST00000556461 GLMPQ8WWB7 406 aa5.97□□□□□ -1.45
VTI1B-206ENST00000556461 C7orf50Q9BRJ6 194 aaKnown RBP5.97□□□□□ -1.45
VTI1B-206ENST00000556461 RABAC1Q9UI14 185 aa5.97□□□□□ -1.45
VTI1B-206ENST00000556461 PAIP2BQ9ULR5 123 aaKnown RBP5.97□□□□□ -1.45
VTI1B-206ENST00000556461 TRAV6A0A075B6T7 132 aa5.96□□□□□ -1.46
VTI1B-206ENST00000556461 TRAV2A0A0B4J234 112 aa5.96□□□□□ -1.46
VTI1B-206ENST00000556461 A0A1W2PS18 150 aa5.96□□□□□ -1.46
VTI1B-206ENST00000556461 CENPXA8MT69 81 aa5.96□□□□□ -1.46
VTI1B-206ENST00000556461 LYRM1O43325 122 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms