RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 Q8NFD4 153 aa12.36□□□□□ -0.43
ARHGEF40-207ENST00000556399 C7orf71A4D174 169 aa12.36□□□□□ -0.43
ARHGEF40-207ENST00000556399 GPR183P32249 361 aa12.36□□□□□ -0.43
ARHGEF40-207ENST00000556399 WDR86Q86TI4 376 aa12.36□□□□□ -0.43
ARHGEF40-207ENST00000556399 MGPP08493 103 aa12.36□□□□□ -0.43
ARHGEF40-207ENST00000556399 RPL7P18124 248 aaKnown RBP12.36□□□□□ -0.43
ARHGEF40-207ENST00000556399 RPL13AP40429 203 aaKnown RBP12.36□□□□□ -0.43
ARHGEF40-207ENST00000556399 LHFPL4Q7Z7J7 247 aa12.36□□□□□ -0.43
ARHGEF40-207ENST00000556399 FBXL7Q9UJT9 491 aa12.36□□□□□ -0.43
ARHGEF40-207ENST00000556399 LY6G6EA0A0G2JKS1 128 aa12.36□□□□□ -0.43
ARHGEF40-207ENST00000556399 C10orf55Q5SWW7 151 aa12.36□□□□□ -0.43
ARHGEF40-207ENST00000556399 C18orf15Q96N68 181 aa12.36□□□□□ -0.43
ARHGEF40-207ENST00000556399 U3KQA8 63 aa12.36□□□□□ -0.43
ARHGEF40-207ENST00000556399 ROS1P08922 2347 aa12.36□□□□□ -0.43
ARHGEF40-207ENST00000556399 YPEL3P61236 119 aaPredicted RBP12.35□□□□□ -0.43
ARHGEF40-207ENST00000556399 DCAF16Q9NXF7 216 aa12.35□□□□□ -0.43
ARHGEF40-207ENST00000556399 RPUSD1Q9UJJ7 312 aaKnown RBP12.35□□□□□ -0.43
ARHGEF40-207ENST00000556399 IGKV1D-17A0A075B6S4 117 aa12.35□□□□□ -0.43
ARHGEF40-207ENST00000556399 A0A1W2PS18 150 aa12.35□□□□□ -0.43
ARHGEF40-207ENST00000556399 TMEM78Q5T7P6 136 aa12.35□□□□□ -0.43
ARHGEF40-207ENST00000556399 NUP35Q8NFH5 326 aa12.35□□□□□ -0.43
ARHGEF40-207ENST00000556399 OTORQ9NRC9 128 aa12.35□□□□□ -0.43
ARHGEF40-207ENST00000556399 S4R3C0 116 aa12.35□□□□□ -0.43
ARHGEF40-207ENST00000556399 RASL11AQ6T310 242 aa12.35□□□□□ -0.43
ARHGEF40-207ENST00000556399 UNQ6494/PRO21346Q6UXR6 183 aa12.35□□□□□ -0.43
ARHGEF40-207ENST00000556399 CHCHD1Q96BP2 118 aaKnown RBP12.35□□□□□ -0.43
ARHGEF40-207ENST00000556399 ST20Q9HBF5 79 aa12.35□□□□□ -0.43
ARHGEF40-207ENST00000556399 RALYQ9UKM9 306 aaKnown RBP12.35□□□□□ -0.43
ARHGEF40-207ENST00000556399 CGB1A6NKQ9 187 aa12.35□□□□□ -0.43
ARHGEF40-207ENST00000556399 PNKDQ8N490 385 aa12.35□□□□□ -0.43
ARHGEF40-207ENST00000556399 IGHV1-69-2A0A0G2JMI3 117 aa12.34□□□□□ -0.43
ARHGEF40-207ENST00000556399 COLQQ9Y215 455 aaPredicted RBP12.34□□□□□ -0.43
ARHGEF40-207ENST00000556399 SAPCD1Q5SSQ6 148 aa12.34□□□□□ -0.43
ARHGEF40-207ENST00000556399 MRPL27Q9P0M9 148 aaKnown RBP12.34□□□□□ -0.43
ARHGEF40-207ENST00000556399 CNOT1A5YKK6 2376 aaKnown RBP12.34□□□□□ -0.43
ARHGEF40-207ENST00000556399 LMO1P25800 156 aa12.34□□□□□ -0.43
ARHGEF40-207ENST00000556399 TSPOP30536 169 aa12.34□□□□□ -0.43
ARHGEF40-207ENST00000556399 ERVK11-1P61568 191 aa12.34□□□□□ -0.43
ARHGEF40-207ENST00000556399 HERVK_113P61574 105 aa12.34□□□□□ -0.43
ARHGEF40-207ENST00000556399 RABAC1Q9UI14 185 aa12.34□□□□□ -0.43
ARHGEF40-207ENST00000556399 A0A1B0GW15 77 aa12.34□□□□□ -0.43
ARHGEF40-207ENST00000556399 MLANAQ16655 118 aa12.34□□□□□ -0.43
ARHGEF40-207ENST00000556399 IGKV3-7A0A075B6H7 116 aa12.33□□□□□ -0.44
ARHGEF40-207ENST00000556399 DTX1Q86Y01 620 aa12.33□□□□□ -0.44
ARHGEF40-207ENST00000556399 HEATR1Q9H583 2144 aaKnown RBP12.33□□□□□ -0.44
ARHGEF40-207ENST00000556399 F2RL2O00254 374 aa12.33□□□□□ -0.44
ARHGEF40-207ENST00000556399 LDLRAD2Q5SZI1 272 aa12.33□□□□□ -0.44
ARHGEF40-207ENST00000556399 Q6AWC8 147 aa12.33□□□□□ -0.44
ARHGEF40-207ENST00000556399 ZCCHC24Q8N2G6 241 aaKnown RBP12.33□□□□□ -0.44
ARHGEF40-207ENST00000556399 LINC00479Q96M42 142 aa12.33□□□□□ -0.44
ARHGEF40-207ENST00000556399 IGHV3-35A0A0C4DH35 117 aa12.33□□□□□ -0.44
ARHGEF40-207ENST00000556399 CIARTQ8N365 385 aaPredicted RBP12.33□□□□□ -0.44
ARHGEF40-207ENST00000556399 SMIM12Q96EX1 92 aa12.33□□□□□ -0.44
ARHGEF40-207ENST00000556399 PYGO2Q9BRQ0 406 aa12.33□□□□□ -0.44
ARHGEF40-207ENST00000556399 FGF23Q9GZV9 251 aaPredicted RBP12.33□□□□□ -0.44
ARHGEF40-207ENST00000556399 C17orf100A8MU93 164 aa12.33□□□□□ -0.44
ARHGEF40-207ENST00000556399 TM4SF20Q53R12 229 aa12.33□□□□□ -0.44
ARHGEF40-207ENST00000556399 HIST1H4GQ99525 98 aa12.33□□□□□ -0.44
ARHGEF40-207ENST00000556399 CDX4O14627 284 aaPredicted RBP12.32□□□□□ -0.44
ARHGEF40-207ENST00000556399 SMIM13P0DJ93 91 aa12.32□□□□□ -0.44
ARHGEF40-207ENST00000556399 COA6Q5JTJ3 125 aaKnown RBP12.32□□□□□ -0.44
ARHGEF40-207ENST00000556399 WFDC3Q8IUB2 231 aa12.32□□□□□ -0.44
ARHGEF40-207ENST00000556399 ORMDL3Q8N138 153 aa12.32□□□□□ -0.44
ARHGEF40-207ENST00000556399 MDS2Q8NDY4 140 aa12.32□□□□□ -0.44
ARHGEF40-207ENST00000556399 IGHV1-46P01743 117 aa12.32□□□□□ -0.44
ARHGEF40-207ENST00000556399 SCRT1Q9BWW7 348 aa12.32□□□□□ -0.44
ARHGEF40-207ENST00000556399 DKK1O94907 266 aa12.32□□□□□ -0.44
ARHGEF40-207ENST00000556399 NPSP0C0P6 89 aa12.32□□□□□ -0.44
ARHGEF40-207ENST00000556399 VDAC2P45880 294 aaPredicted RBP12.31□□□□□ -0.44
ARHGEF40-207ENST00000556399 HIST1H1AQ02539 215 aaPredicted RBP12.31□□□□□ -0.44
ARHGEF40-207ENST00000556399 H3BUT2 72 aa12.31□□□□□ -0.44
ARHGEF40-207ENST00000556399 hDV102S1A0JD36 115 aa12.31□□□□□ -0.44
ARHGEF40-207ENST00000556399 PRB3Q04118 309 aaPredicted RBP12.31□□□□□ -0.44
ARHGEF40-207ENST00000556399 CENPVQ7Z7K6 275 aaPredicted RBP12.31□□□□□ -0.44
ARHGEF40-207ENST00000556399 ZNF502Q8TBZ5 544 aa12.31□□□□□ -0.44
ARHGEF40-207ENST00000556399 PSMB2P49721 201 aa12.3□□□□□ -0.44
ARHGEF40-207ENST00000556399 NCOA6Q14686 2063 aaPredicted RBP12.3□□□□□ -0.44
ARHGEF40-207ENST00000556399 GPR179Q6PRD1 2367 aa12.3□□□□□ -0.44
ARHGEF40-207ENST00000556399 BSPH1Q075Z2 132 aa12.3□□□□□ -0.44
ARHGEF40-207ENST00000556399 MPV17L2Q567V2 206 aa12.3□□□□□ -0.44
ARHGEF40-207ENST00000556399 ARL6IP6Q8N6S5 226 aa12.3□□□□□ -0.44
ARHGEF40-207ENST00000556399 PLSCR4Q9NRQ2 329 aa12.3□□□□□ -0.44
ARHGEF40-207ENST00000556399 V9GYV3 84 aa12.3□□□□□ -0.44
ARHGEF40-207ENST00000556399 TRBV20OR9-2A0A075B6H5 130 aa12.3□□□□□ -0.44
ARHGEF40-207ENST00000556399 RPL15P61313 204 aaKnown RBP12.3□□□□□ -0.44
ARHGEF40-207ENST00000556399 ORAOV1Q8WV07 137 aa12.3□□□□□ -0.44
ARHGEF40-207ENST00000556399 FNDC10F2Z333 226 aa12.3□□□□□ -0.44
ARHGEF40-207ENST00000556399 IGKV1-16P04430 117 aa12.3□□□□□ -0.44
ARHGEF40-207ENST00000556399 RNASE2P10153 161 aaKnown RBP12.3□□□□□ -0.44
ARHGEF40-207ENST00000556399 UBE2V1Q13404 147 aa12.3□□□□□ -0.44
ARHGEF40-207ENST00000556399 EP300Q09472 2414 aaPredicted RBP12.3□□□□□ -0.44
ARHGEF40-207ENST00000556399 PRB4P10163 310 aaPredicted RBP12.29□□□□□ -0.44
ARHGEF40-207ENST00000556399 AMMECR1LQ6DCA0 310 aa12.29□□□□□ -0.44
ARHGEF40-207ENST00000556399 FNDC4Q9H6D8 234 aaPredicted RBP12.29□□□□□ -0.44
ARHGEF40-207ENST00000556399 TMEM160Q9NX00 188 aa12.29□□□□□ -0.44
ARHGEF40-207ENST00000556399 SPCS1Q9Y6A9 102 aa12.29□□□□□ -0.44
ARHGEF40-207ENST00000556399 IGHV3-23P01764 117 aa12.29□□□□□ -0.44
ARHGEF40-207ENST00000556399 C8orf46Q8TAG6 207 aa12.29□□□□□ -0.44
ARHGEF40-207ENST00000556399 OR5AN1Q8NGI8 311 aa12.29□□□□□ -0.44
ARHGEF40-207ENST00000556399 C18orf32Q8TCD1 76 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms