RNA–Protein interactions for RNA: ENST00000556268.1

GTF2A1-204, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 5

Gene GTF2A1, Length 864 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-204ENST00000556268 MIFP14174 115 aa6.43□□□□□ -1.38
GTF2A1-204ENST00000556268 HLA-DMBP28068 263 aa6.43□□□□□ -1.38
GTF2A1-204ENST00000556268 G6PCP35575 357 aa6.43□□□□□ -1.38
GTF2A1-204ENST00000556268 RFX2P48378 723 aa6.43□□□□□ -1.38
GTF2A1-204ENST00000556268 DEFB131AP59861 70 aa6.43□□□□□ -1.38
GTF2A1-204ENST00000556268 TMEM41BQ5BJD5 291 aa6.43□□□□□ -1.38
GTF2A1-204ENST00000556268 TRPT1Q86TN4 253 aaKnown RBP6.43□□□□□ -1.38
GTF2A1-204ENST00000556268 FAM24BQ8N5W8 94 aa6.43□□□□□ -1.38
GTF2A1-204ENST00000556268 TSC22D3Q99576 134 aa6.43□□□□□ -1.38
GTF2A1-204ENST00000556268 RNF126Q9BV68 326 aa6.43□□□□□ -1.38
GTF2A1-204ENST00000556268 DIABLOQ9NR28 239 aa6.43□□□□□ -1.38
GTF2A1-204ENST00000556268 BLOC1S6Q9UL45 172 aa6.43□□□□□ -1.38
GTF2A1-204ENST00000556268 SSR3Q9UNL2 185 aa6.43□□□□□ -1.38
GTF2A1-204ENST00000556268 AGRNO00468 2067 aa6.42□□□□□ -1.38
GTF2A1-204ENST00000556268 IGHV3OR16-13A0A075B7E8 117 aa6.42□□□□□ -1.38
GTF2A1-204ENST00000556268 IGHV3-74A0A0B4J1X5 117 aa6.42□□□□□ -1.38
GTF2A1-204ENST00000556268 TRAV10A0A0B4J240 114 aa6.42□□□□□ -1.38
GTF2A1-204ENST00000556268 IGHV4-28A0A0C4DH34 117 aa6.42□□□□□ -1.38
GTF2A1-204ENST00000556268 INS-IGF2F8WCM5 200 aa6.42□□□□□ -1.38
GTF2A1-204ENST00000556268 RTL8CO15255 209 aa6.42□□□□□ -1.38
GTF2A1-204ENST00000556268 HSPE1P61604 102 aaKnown RBP6.42□□□□□ -1.38
GTF2A1-204ENST00000556268 LEMD1Q68G75 181 aa6.42□□□□□ -1.38
GTF2A1-204ENST00000556268 TMEM17Q86X19 198 aa6.42□□□□□ -1.38
GTF2A1-204ENST00000556268 POM121L12Q8N7R1 296 aa6.42□□□□□ -1.38
GTF2A1-204ENST00000556268 SVIPQ8NHG7 77 aa6.42□□□□□ -1.38
GTF2A1-204ENST00000556268 GRAMD2BQ96HH9 432 aa6.42□□□□□ -1.38
GTF2A1-204ENST00000556268 SEC22AQ96IW7 307 aa6.42□□□□□ -1.38
GTF2A1-204ENST00000556268 RBM38Q9H0Z9 239 aaKnown RBP6.42□□□□□ -1.38
GTF2A1-204ENST00000556268 HSPG2P98160 4391 aa6.42□□□□□ -1.38
GTF2A1-204ENST00000556268 IGHV4-4A0A075B6R2 117 aa6.41□□□□□ -1.38
GTF2A1-204ENST00000556268 A0A1B0GU03 582 aa6.41□□□□□ -1.38
GTF2A1-204ENST00000556268 K7EQG2 157 aa6.41□□□□□ -1.38
GTF2A1-204ENST00000556268 DNASE2O00115 360 aaPredicted RBP6.41□□□□□ -1.38
GTF2A1-204ENST00000556268 GPR31O00270 319 aa6.41□□□□□ -1.38
GTF2A1-204ENST00000556268 ST8SIA3O43173 380 aa6.41□□□□□ -1.38
GTF2A1-204ENST00000556268 IGKV1-39P01597 117 aa6.41□□□□□ -1.38
GTF2A1-204ENST00000556268 IGHV3-48P01763 117 aa6.41□□□□□ -1.38
GTF2A1-204ENST00000556268 IGKV1D-39P04432 117 aa6.41□□□□□ -1.38
GTF2A1-204ENST00000556268 RLN1P04808 185 aa6.41□□□□□ -1.38
GTF2A1-204ENST00000556268 FCER2P06734 321 aa6.41□□□□□ -1.38
GTF2A1-204ENST00000556268 CRYBB3P26998 211 aa6.41□□□□□ -1.38
GTF2A1-204ENST00000556268 NPBWR1P48145 328 aa6.41□□□□□ -1.38
GTF2A1-204ENST00000556268 GABARAPL2P60520 117 aa6.41□□□□□ -1.38
GTF2A1-204ENST00000556268 HERV-K104P61576 105 aa6.41□□□□□ -1.38
GTF2A1-204ENST00000556268 PRCDQ00LT1 54 aa6.41□□□□□ -1.38
GTF2A1-204ENST00000556268 C12orf74Q32Q52 190 aa6.41□□□□□ -1.38
GTF2A1-204ENST00000556268 LGALS9BQ3B8N2 356 aa6.41□□□□□ -1.38
GTF2A1-204ENST00000556268 IDNKQ5T6J7 187 aa6.41□□□□□ -1.38
GTF2A1-204ENST00000556268 MORN3Q6PF18 240 aaPredicted RBP6.41□□□□□ -1.38
GTF2A1-204ENST00000556268 Q6ZTC4 211 aa6.41□□□□□ -1.38
GTF2A1-204ENST00000556268 STHQ8IWL8 128 aa6.41□□□□□ -1.38
GTF2A1-204ENST00000556268 CMTM1Q8IZ96 169 aa6.41□□□□□ -1.38
GTF2A1-204ENST00000556268 OR6F1Q8NGZ6 308 aa6.41□□□□□ -1.38
GTF2A1-204ENST00000556268 CNBD2Q96M20 576 aa6.41□□□□□ -1.38
GTF2A1-204ENST00000556268 GINS3Q9BRX5 216 aa6.41□□□□□ -1.38
GTF2A1-204ENST00000556268 ZNF2Q9BSG1 426 aaPredicted RBP6.41□□□□□ -1.38
GTF2A1-204ENST00000556268 RNF167Q9H6Y7 350 aa6.41□□□□□ -1.38
GTF2A1-204ENST00000556268 EHFQ9NZC4 300 aa6.41□□□□□ -1.38
GTF2A1-204ENST00000556268 ANKRD65E5RJM6 399 aa6.4□□□□□ -1.38
GTF2A1-204ENST00000556268 GNG7O60262 68 aa6.4□□□□□ -1.38
GTF2A1-204ENST00000556268 PMP2P02689 132 aa6.4□□□□□ -1.38
GTF2A1-204ENST00000556268 SPP1P10451 314 aa6.4□□□□□ -1.38
GTF2A1-204ENST00000556268 NPPCP23582 126 aa6.4□□□□□ -1.38
GTF2A1-204ENST00000556268 ERHP84090 104 aaKnown RBP6.4□□□□□ -1.38
GTF2A1-204ENST00000556268 ZNF600Q6ZNG1 722 aa6.4□□□□□ -1.38
GTF2A1-204ENST00000556268 DCANP1Q8TF63 244 aa6.4□□□□□ -1.38
GTF2A1-204ENST00000556268 FCGR1BQ92637 280 aa6.4□□□□□ -1.38
GTF2A1-204ENST00000556268 S100A16Q96FQ6 103 aaKnown RBP6.4□□□□□ -1.38
GTF2A1-204ENST00000556268 YTHDF1Q9BYJ9 559 aaKnown RBP6.4□□□□□ -1.38
GTF2A1-204ENST00000556268 PUS1Q9Y606 427 aaKnown RBP eCLIP6.4□□□□□ -1.38
GTF2A1-204ENST00000556268 A0A0B4J293 547 aa6.39□□□□□ -1.39
GTF2A1-204ENST00000556268 IGHV3-66A0A0C4DH42 116 aa6.39□□□□□ -1.39
GTF2A1-204ENST00000556268 A0A1W2PS18 150 aa6.39□□□□□ -1.39
GTF2A1-204ENST00000556268 MEIS3P1A6NDR6 274 aa6.39□□□□□ -1.39
GTF2A1-204ENST00000556268 AMBPP02760 352 aa6.39□□□□□ -1.39
GTF2A1-204ENST00000556268 P0C879 139 aa6.39□□□□□ -1.39
GTF2A1-204ENST00000556268 C4BPBP20851 252 aa6.39□□□□□ -1.39
GTF2A1-204ENST00000556268 PSMB9P28065 219 aa6.39□□□□□ -1.39
GTF2A1-204ENST00000556268 HSPA13P48723 471 aa6.39□□□□□ -1.39
GTF2A1-204ENST00000556268 MXD1Q05195 221 aa6.39□□□□□ -1.39
GTF2A1-204ENST00000556268 LPCAT3Q6P1A2 487 aa6.39□□□□□ -1.39
GTF2A1-204ENST00000556268 Q6ZR54 194 aa6.39□□□□□ -1.39
GTF2A1-204ENST00000556268 H2BFWTQ7Z2G1 175 aa6.39□□□□□ -1.39
GTF2A1-204ENST00000556268 TSPAN14Q8NG11 270 aa6.39□□□□□ -1.39
GTF2A1-204ENST00000556268 OR4A16Q8NH70 328 aa6.39□□□□□ -1.39
GTF2A1-204ENST00000556268 ZNF479Q96JC4 524 aa6.39□□□□□ -1.39
GTF2A1-204ENST00000556268 RAB40CQ96S21 281 aa6.39□□□□□ -1.39
GTF2A1-204ENST00000556268 TMEM231Q9H6L2 316 aa6.39□□□□□ -1.39
GTF2A1-204ENST00000556268 TBC1D24Q9ULP9 559 aa6.39□□□□□ -1.39
GTF2A1-204ENST00000556268 RAB26Q9ULW5 256 aa6.39□□□□□ -1.39
GTF2A1-204ENST00000556268 DEFB131BA0A096LNP1 70 aa6.38□□□□□ -1.39
GTF2A1-204ENST00000556268 KNCNA6PVL3 124 aa6.38□□□□□ -1.39
GTF2A1-204ENST00000556268 IGKV1-17P01599 117 aa6.38□□□□□ -1.39
GTF2A1-204ENST00000556268 EIF4EP06730 217 aaKnown RBP6.38□□□□□ -1.39
GTF2A1-204ENST00000556268 P0DMU3 169 aa6.38□□□□□ -1.39
GTF2A1-204ENST00000556268 FAM231AP0DMU4 169 aa6.38□□□□□ -1.39
GTF2A1-204ENST00000556268 FAM231CP0DMU5 169 aa6.38□□□□□ -1.39
GTF2A1-204ENST00000556268 RPL5P46777 297 aaKnown RBP6.38□□□□□ -1.39
GTF2A1-204ENST00000556268 TAS2R46P59540 309 aa6.38□□□□□ -1.39
GTF2A1-204ENST00000556268 IZUMO2Q6UXV1 221 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 103.7 ms