RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 ODF3BA8MYP8 253 aa5.43□□□□□ -1.54
SLIRP-204ENST00000555890 TEX22C9J3V5 150 aa5.43□□□□□ -1.54
SLIRP-204ENST00000555890 F8W036 122 aa5.43□□□□□ -1.54
SLIRP-204ENST00000555890 TIMM23O14925 209 aa5.43□□□□□ -1.54
SLIRP-204ENST00000555890 MOSP00540 346 aa5.43□□□□□ -1.54
SLIRP-204ENST00000555890 IFNA1P01562 189 aa5.43□□□□□ -1.54
SLIRP-204ENST00000555890 APOC3P02656 99 aa5.43□□□□□ -1.54
SLIRP-204ENST00000555890 CD5P06127 495 aa5.43□□□□□ -1.54
SLIRP-204ENST00000555890 MYOD1P15172 320 aa5.43□□□□□ -1.54
SLIRP-204ENST00000555890 MDKP21741 143 aaPredicted RBP5.43□□□□□ -1.54
SLIRP-204ENST00000555890 GPX4P36969 197 aaPredicted RBP5.43□□□□□ -1.54
SLIRP-204ENST00000555890 ELLP55199 621 aaPredicted RBP5.43□□□□□ -1.54
SLIRP-204ENST00000555890 DLX1P56177 255 aa5.43□□□□□ -1.54
SLIRP-204ENST00000555890 DEFA5Q01523 94 aa5.43□□□□□ -1.54
SLIRP-204ENST00000555890 PRB3Q04118 309 aaPredicted RBP5.43□□□□□ -1.54
SLIRP-204ENST00000555890 AKR1C1Q04828 323 aa5.43□□□□□ -1.54
SLIRP-204ENST00000555890 PRSS8Q16651 343 aa5.43□□□□□ -1.54
SLIRP-204ENST00000555890 FFAR4Q5NUL3 377 aa5.43□□□□□ -1.54
SLIRP-204ENST00000555890 OR10G4Q8NGN3 311 aa5.43□□□□□ -1.54
SLIRP-204ENST00000555890 OR10G9Q8NGN4 311 aa5.43□□□□□ -1.54
SLIRP-204ENST00000555890 OR10G7Q8NGN6 311 aa5.43□□□□□ -1.54
SLIRP-204ENST00000555890 C10orf105Q8TEF2 133 aa5.43□□□□□ -1.54
SLIRP-204ENST00000555890 SEC11CQ9BY50 192 aa5.43□□□□□ -1.54
SLIRP-204ENST00000555890 NPCDR1Q9BY65 106 aa5.43□□□□□ -1.54
SLIRP-204ENST00000555890 ACTR3CQ9C0K3 210 aaPredicted RBP5.43□□□□□ -1.54
SLIRP-204ENST00000555890 SIRPDQ9H106 197 aa5.43□□□□□ -1.54
SLIRP-204ENST00000555890 TMEM231Q9H6L2 316 aa5.43□□□□□ -1.54
SLIRP-204ENST00000555890 ZNF430Q9H8G1 570 aaPredicted RBP5.43□□□□□ -1.54
SLIRP-204ENST00000555890 LPAR2Q9HBW0 351 aa5.43□□□□□ -1.54
SLIRP-204ENST00000555890 RPRMQ9NS64 109 aa5.43□□□□□ -1.54
SLIRP-204ENST00000555890 SLC39A9Q9NUM3 307 aa5.43□□□□□ -1.54
SLIRP-204ENST00000555890 KIAA1456Q9P272 454 aa5.43□□□□□ -1.54
SLIRP-204ENST00000555890 METTL1Q9UBP6 276 aaKnown RBP5.43□□□□□ -1.54
SLIRP-204ENST00000555890 FAM96BQ9Y3D0 163 aa5.43□□□□□ -1.54
SLIRP-204ENST00000555890 TBL2Q9Y4P3 447 aaKnown RBP5.43□□□□□ -1.54
SLIRP-204ENST00000555890 HILPDAQ9Y5L2 63 aa5.43□□□□□ -1.54
SLIRP-204ENST00000555890 TNCP24821 2201 aa5.43□□□□□ -1.54
SLIRP-204ENST00000555890 CTXND1A0A1B0GTU2 59 aa5.42□□□□□ -1.54
SLIRP-204ENST00000555890 A0A1B0GV50 99 aa5.42□□□□□ -1.54
SLIRP-204ENST00000555890 RBFOX3A6NFN3 312 aa5.42□□□□□ -1.54
SLIRP-204ENST00000555890 VWC2LB2RUY7 222 aa5.42□□□□□ -1.54
SLIRP-204ENST00000555890 PRSS46E5RG02 174 aa5.42□□□□□ -1.54
SLIRP-204ENST00000555890 CRYGBP07316 175 aa5.42□□□□□ -1.54
SLIRP-204ENST00000555890 SNRNP70P08621 437 aaKnown RBP5.42□□□□□ -1.54
SLIRP-204ENST00000555890 OR13C7P0DN81 318 aa5.42□□□□□ -1.54
SLIRP-204ENST00000555890 MED14OSP0DP75 135 aa5.42□□□□□ -1.54
SLIRP-204ENST00000555890 RNASE2P10153 161 aaKnown RBP5.42□□□□□ -1.54
SLIRP-204ENST00000555890 M6PRP20645 277 aa5.42□□□□□ -1.54
SLIRP-204ENST00000555890 BRS3P32247 399 aa5.42□□□□□ -1.54
SLIRP-204ENST00000555890 OPRK1P41145 380 aa5.42□□□□□ -1.54
SLIRP-204ENST00000555890 RPL27AP46776 148 aaKnown RBP5.42□□□□□ -1.54
SLIRP-204ENST00000555890 UBE2E1P51965 193 aa5.42□□□□□ -1.54
SLIRP-204ENST00000555890 PAX2Q02962 417 aa5.42□□□□□ -1.54
SLIRP-204ENST00000555890 KLRD1Q13241 179 aa5.42□□□□□ -1.54
SLIRP-204ENST00000555890 PLGLAQ15195 96 aa5.42□□□□□ -1.54
SLIRP-204ENST00000555890 TNXAQ16473 311 aa5.42□□□□□ -1.54
SLIRP-204ENST00000555890 BSXQ3C1V8 233 aa5.42□□□□□ -1.54
SLIRP-204ENST00000555890 C10orf91Q5T1B1 145 aa5.42□□□□□ -1.54
SLIRP-204ENST00000555890 ETFRF1Q6IPR1 90 aa5.42□□□□□ -1.54
SLIRP-204ENST00000555890 HCP5Q6MZN7 132 aa5.42□□□□□ -1.54
SLIRP-204ENST00000555890 ACSM6Q6P461 480 aa5.42□□□□□ -1.54
SLIRP-204ENST00000555890 SPSB3Q6PJ21 355 aa5.42□□□□□ -1.54
SLIRP-204ENST00000555890 RBMS3Q6XE24 437 aaKnown RBP5.42□□□□□ -1.54
SLIRP-204ENST00000555890 PPP1R27Q86WC6 154 aa5.42□□□□□ -1.54
SLIRP-204ENST00000555890 SVBPQ8N300 66 aa5.42□□□□□ -1.54
SLIRP-204ENST00000555890 LINC01356Q8N9X3 169 aa5.42□□□□□ -1.54
SLIRP-204ENST00000555890 OR10W1Q8NGF6 305 aa5.42□□□□□ -1.54
SLIRP-204ENST00000555890 OR2T10Q8NGZ9 312 aa5.42□□□□□ -1.54
SLIRP-204ENST00000555890 RNASEH2CQ8TDP1 164 aaKnown RBP5.42□□□□□ -1.54
SLIRP-204ENST00000555890 TMEM170AQ8WVE7 144 aa5.42□□□□□ -1.54
SLIRP-204ENST00000555890 CACNG8Q8WXS5 425 aa5.42□□□□□ -1.54
SLIRP-204ENST00000555890 MALSU1Q96EH3 234 aa5.42□□□□□ -1.54
SLIRP-204ENST00000555890 RITA1Q96K30 269 aa5.42□□□□□ -1.54
SLIRP-204ENST00000555890 SLC35E1Q96K37 410 aa5.42□□□□□ -1.54
SLIRP-204ENST00000555890 SRSF8Q9BRL6 282 aaKnown RBP5.42□□□□□ -1.54
SLIRP-204ENST00000555890 CARHSP1Q9Y2V2 147 aaKnown RBP5.42□□□□□ -1.54
SLIRP-204ENST00000555890 SIGLEC9Q9Y336 463 aa5.42□□□□□ -1.54
SLIRP-204ENST00000555890 A0A1W2PPV4 95 aa5.41□□□□□ -1.54
SLIRP-204ENST00000555890 A0A1W2PRD5 423 aa5.41□□□□□ -1.54
SLIRP-204ENST00000555890 A0A1W2PRF3 423 aa5.41□□□□□ -1.54
SLIRP-204ENST00000555890 A0A1W2PRM7 423 aa5.41□□□□□ -1.54
SLIRP-204ENST00000555890 MAP1LC3B2A6NCE7 125 aa5.41□□□□□ -1.54
SLIRP-204ENST00000555890 CORTO00230 105 aa5.41□□□□□ -1.54
SLIRP-204ENST00000555890 NBR2O15453 112 aa5.41□□□□□ -1.54
SLIRP-204ENST00000555890 SNAPINO95295 136 aa5.41□□□□□ -1.54
SLIRP-204ENST00000555890 CNIH1O95406 144 aa5.41□□□□□ -1.54
SLIRP-204ENST00000555890 SFTA3P0C7M3 94 aa5.41□□□□□ -1.54
SLIRP-204ENST00000555890 FAM106CPP0CH98 169 aa5.41□□□□□ -1.54
SLIRP-204ENST00000555890 TAGLN2P37802 199 aaKnown RBP5.41□□□□□ -1.54
SLIRP-204ENST00000555890 PPT1P50897 306 aa5.41□□□□□ -1.54
SLIRP-204ENST00000555890 GNB1P62873 340 aa5.41□□□□□ -1.54
SLIRP-204ENST00000555890 FOXL1Q12952 345 aa5.41□□□□□ -1.54
SLIRP-204ENST00000555890 HES1Q14469 280 aa5.41□□□□□ -1.54
SLIRP-204ENST00000555890 HNF4GQ14541 408 aa5.41□□□□□ -1.54
SLIRP-204ENST00000555890 SSX2Q16385 188 aa5.41□□□□□ -1.54
SLIRP-204ENST00000555890 FAM122CQ6P4D5 195 aa5.41□□□□□ -1.54
SLIRP-204ENST00000555890 LCN15Q6UWW0 184 aa5.41□□□□□ -1.54
SLIRP-204ENST00000555890 TMEM144Q7Z5S9 345 aa5.41□□□□□ -1.54
SLIRP-204ENST00000555890 LHFPL4Q7Z7J7 247 aa5.41□□□□□ -1.54
SLIRP-204ENST00000555890 C1QL4Q86Z23 238 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms