RNA–Protein interactions for RNA: ENST00000555542.5

PRKCH-216, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-216ENST00000555542 SMCO1Q147U7 214 aa18.07■□□□□ 0.48
PRKCH-216ENST00000555542 ETFRF1Q6IPR1 90 aa18.07■□□□□ 0.48
PRKCH-216ENST00000555542 LYG2Q86SG7 212 aa18.07■□□□□ 0.48
PRKCH-216ENST00000555542 LGI3Q8N145 548 aa18.07■□□□□ 0.48
PRKCH-216ENST00000555542 LILRB2Q8N423 598 aa18.07■□□□□ 0.48
PRKCH-216ENST00000555542 OR1S2Q8NGQ3 325 aa18.07■□□□□ 0.48
PRKCH-216ENST00000555542 SHPKQ9UHJ6 478 aa18.07■□□□□ 0.48
PRKCH-216ENST00000555542 KLF9Q13886 244 aaPredicted RBP18.06■□□□□ 0.48
PRKCH-216ENST00000555542 LYZL2Q7Z4W2 148 aa18.06■□□□□ 0.48
PRKCH-216ENST00000555542 RNF183Q96D59 192 aa18.06■□□□□ 0.48
PRKCH-216ENST00000555542 GRAMD2BQ96HH9 432 aa18.06■□□□□ 0.48
PRKCH-216ENST00000555542 PIGBOS1A0A0B4J2F0 54 aa18.05■□□□□ 0.48
PRKCH-216ENST00000555542 CXorf65A6NEN9 183 aa18.05■□□□□ 0.48
PRKCH-216ENST00000555542 IGKV1-17P01599 117 aa18.05■□□□□ 0.48
PRKCH-216ENST00000555542 OR10J1P30954 320 aa18.05■□□□□ 0.48
PRKCH-216ENST00000555542 SUPT4H1P63272 117 aaKnown RBP18.05■□□□□ 0.48
PRKCH-216ENST00000555542 TNFRSF9Q07011 255 aa18.05■□□□□ 0.48
PRKCH-216ENST00000555542 PMS2P11Q13670 270 aa18.05■□□□□ 0.48
PRKCH-216ENST00000555542 NMSQ5H8A3 153 aa18.05■□□□□ 0.48
PRKCH-216ENST00000555542 PRSS54Q6PEW0 395 aa18.05■□□□□ 0.48
PRKCH-216ENST00000555542 STXBP6Q8NFX7 210 aa18.05■□□□□ 0.48
PRKCH-216ENST00000555542 Q8WTZ3 238 aa18.05■□□□□ 0.48
PRKCH-216ENST00000555542 CSTL1Q9H114 145 aa18.05■□□□□ 0.48
PRKCH-216ENST00000555542 DYNC2H1Q8NCM8 4307 aaKnown RBP18.04■□□□□ 0.48
PRKCH-216ENST00000555542 MPTX1A8MV57 137 aa18.04■□□□□ 0.48
PRKCH-216ENST00000555542 IGLC1P0CG04 106 aa18.04■□□□□ 0.48
PRKCH-216ENST00000555542 P2RY1P47900 373 aa18.04■□□□□ 0.48
PRKCH-216ENST00000555542 DEFB131AP59861 70 aa18.04■□□□□ 0.48
PRKCH-216ENST00000555542 OR1S1Q8NH92 325 aa18.04■□□□□ 0.48
PRKCH-216ENST00000555542 DTD1Q8TEA8 209 aa18.04■□□□□ 0.48
PRKCH-216ENST00000555542 TRIM63Q969Q1 353 aa18.04■□□□□ 0.48
PRKCH-216ENST00000555542 ACY3Q96HD9 319 aa18.04■□□□□ 0.48
PRKCH-216ENST00000555542 V9GYH0 126 aa18.04■□□□□ 0.48
PRKCH-216ENST00000555542 TRAV2A0A0B4J234 112 aa18.03■□□□□ 0.48
PRKCH-216ENST00000555542 VAMP1P23763 118 aa18.03■□□□□ 0.48
PRKCH-216ENST00000555542 CRYBB3P26998 211 aa18.03■□□□□ 0.48
PRKCH-216ENST00000555542 LEMD1Q68G75 181 aa18.03■□□□□ 0.48
PRKCH-216ENST00000555542 RBKSQ9H477 322 aa18.03■□□□□ 0.48
PRKCH-216ENST00000555542 HSPB7Q9UBY9 170 aa18.03■□□□□ 0.48
PRKCH-216ENST00000555542 U3KQ87 197 aa18.03■□□□□ 0.48
PRKCH-216ENST00000555542 EIF2B2P49770 351 aaKnown RBP18.02■□□□□ 0.48
PRKCH-216ENST00000555542 TMEM217Q8N7C4 229 aa18.02■□□□□ 0.48
PRKCH-216ENST00000555542 TMEM170AQ8WVE7 144 aa18.02■□□□□ 0.48
PRKCH-216ENST00000555542 NPIPB3Q92617 1050 aa18.02■□□□□ 0.48
PRKCH-216ENST00000555542 IFNA4P05014 189 aa18.01■□□□□ 0.47
PRKCH-216ENST00000555542 YPEL3P61236 119 aaPredicted RBP18.01■□□□□ 0.47
PRKCH-216ENST00000555542 RBMS2Q15434 407 aaKnown RBP18.01■□□□□ 0.47
PRKCH-216ENST00000555542 ZNF79Q15937 498 aa18.01■□□□□ 0.47
PRKCH-216ENST00000555542 TMEM128Q5BJH2 165 aa18.01■□□□□ 0.47
PRKCH-216ENST00000555542 HNRNPCP07910 306 aaKnown RBP eCLIP18■□□□□ 0.47
PRKCH-216ENST00000555542 STHQ8IWL8 128 aa18■□□□□ 0.47
PRKCH-216ENST00000555542 FAM24BQ8N5W8 94 aa18■□□□□ 0.47
PRKCH-216ENST00000555542 RYR2Q92736 4967 aa18■□□□□ 0.47
PRKCH-216ENST00000555542 DUXBA0A1W2PPF3 345 aa17.99■□□□□ 0.47
PRKCH-216ENST00000555542 CA1P00915 261 aaPredicted RBP17.99■□□□□ 0.47
PRKCH-216ENST00000555542 IL4P05112 153 aa17.99■□□□□ 0.47
PRKCH-216ENST00000555542 INPP1P49441 399 aa17.99■□□□□ 0.47
PRKCH-216ENST00000555542 SPANXN2Q5MJ10 180 aa17.99■□□□□ 0.47
PRKCH-216ENST00000555542 SLC25A21Q9BQT8 299 aaPredicted RBP17.99■□□□□ 0.47
PRKCH-216ENST00000555542 LYSTQ99698 3801 aa17.98■□□□□ 0.47
PRKCH-216ENST00000555542 HELTA6NFD8 242 aa17.98■□□□□ 0.47
PRKCH-216ENST00000555542 CCDC190Q86UF4 302 aa17.98■□□□□ 0.47
PRKCH-216ENST00000555542 GATAD1Q8WUU5 269 aa17.98■□□□□ 0.47
PRKCH-216ENST00000555542 DEDD2Q8WXF8 326 aa17.98■□□□□ 0.47
PRKCH-216ENST00000555542 RARRES2Q99969 163 aa17.98■□□□□ 0.47
PRKCH-216ENST00000555542 NUPR2A6NF83 97 aa17.97■□□□□ 0.47
PRKCH-216ENST00000555542 K7EQG2 157 aa17.97■□□□□ 0.47
PRKCH-216ENST00000555542 ZNF688P0C7X2 276 aa17.97■□□□□ 0.47
PRKCH-216ENST00000555542 RD3LP0DJH9 198 aa17.97■□□□□ 0.47
PRKCH-216ENST00000555542 EWSR1Q01844 656 aaKnown RBP eCLIP17.97■□□□□ 0.47
PRKCH-216ENST00000555542 PAIP2BQ9ULR5 123 aaKnown RBP17.97■□□□□ 0.47
PRKCH-216ENST00000555542 TOMM40O96008 361 aa17.96■□□□□ 0.47
PRKCH-216ENST00000555542 AP2S1P53680 142 aaPredicted RBP17.96■□□□□ 0.47
PRKCH-216ENST00000555542 DHRS2Q13268 280 aa17.96■□□□□ 0.47
PRKCH-216ENST00000555542 USF2Q15853 346 aaPredicted RBP17.96■□□□□ 0.47
PRKCH-216ENST00000555542 SLC35E1Q96K37 410 aa17.96■□□□□ 0.47
PRKCH-216ENST00000555542 RBM38Q9H0Z9 239 aaKnown RBP17.96■□□□□ 0.47
PRKCH-216ENST00000555542 ZFP92A6NM28 416 aa17.95■□□□□ 0.46
PRKCH-216ENST00000555542 ATP5IP56385 69 aaPredicted RBP17.95■□□□□ 0.46
PRKCH-216ENST00000555542 CENPSQ8N2Z9 138 aa17.95■□□□□ 0.46
PRKCH-216ENST00000555542 OR11H2Q8NH07 326 aa17.95■□□□□ 0.46
PRKCH-216ENST00000555542 SACSQ9NZJ4 4579 aa17.94■□□□□ 0.46
PRKCH-216ENST00000555542 ZNF701M0R085 212 aaPredicted RBP17.94■□□□□ 0.46
PRKCH-216ENST00000555542 IAPPP10997 89 aa17.94■□□□□ 0.46
PRKCH-216ENST00000555542 RAB11AP62491 216 aa17.94■□□□□ 0.46
PRKCH-216ENST00000555542 PPP1R1AQ13522 171 aa17.94■□□□□ 0.46
PRKCH-216ENST00000555542 TRIQKQ629K1 86 aa17.94■□□□□ 0.46
PRKCH-216ENST00000555542 C16orf54Q6UWD8 224 aa17.94■□□□□ 0.46
PRKCH-216ENST00000555542 PBDC1Q9BVG4 233 aa17.94■□□□□ 0.46
PRKCH-216ENST00000555542 U3KQE9 123 aa17.94■□□□□ 0.46
PRKCH-216ENST00000555542 MED6O75586 246 aa17.93■□□□□ 0.46
PRKCH-216ENST00000555542 SFT2D2O95562 160 aa17.93■□□□□ 0.46
PRKCH-216ENST00000555542 PSG1P11464 419 aa17.93■□□□□ 0.46
PRKCH-216ENST00000555542 ATF4P18848 351 aaPredicted RBP17.93■□□□□ 0.46
PRKCH-216ENST00000555542 LRTM2Q8N967 370 aa17.93■□□□□ 0.46
PRKCH-216ENST00000555542 OR51G1Q8NGK1 321 aa17.93■□□□□ 0.46
PRKCH-216ENST00000555542 DCANP1Q8TF63 244 aa17.93■□□□□ 0.46
PRKCH-216ENST00000555542 GLMPQ8WWB7 406 aa17.93■□□□□ 0.46
PRKCH-216ENST00000555542 TMED3Q9Y3Q3 217 aa17.93■□□□□ 0.46
PRKCH-216ENST00000555542 GPX4P36969 197 aaPredicted RBP17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms