RNA–Protein interactions for RNA: ENST00000554994.5

ATXN3-231, Transcript of ataxin 3, human

TSL 1 (best)

Gene ATXN3, Length 922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN3-231	ENST00000554994	LYZL2	Q7Z4W2	148 aa		3.55	□□□□□ -1.84
ATXN3-231	ENST00000554994	LGI3	Q8N145	548 aa		3.55	□□□□□ -1.84
ATXN3-231	ENST00000554994	DYNLRB2	Q8TF09	96 aa		3.55	□□□□□ -1.84
ATXN3-231	ENST00000554994	RBPMS	Q93062	196 aa	Known RBP	3.55	□□□□□ -1.84
ATXN3-231	ENST00000554994	LSM10	Q969L4	123 aa	Known RBP	3.55	□□□□□ -1.84
ATXN3-231	ENST00000554994	CXorf58	Q96LI9	332 aa		3.55	□□□□□ -1.84
ATXN3-231	ENST00000554994	SLC25A21	Q9BQT8	299 aa	Predicted RBP	3.55	□□□□□ -1.84
ATXN3-231	ENST00000554994	C20orf24	Q9BUV8	137 aa		3.55	□□□□□ -1.84
ATXN3-231	ENST00000554994	KRTAP2-2	Q9BYT5	123 aa		3.55	□□□□□ -1.84
ATXN3-231	ENST00000554994	HIPK2	Q9H2X6	1198 aa		3.55	□□□□□ -1.84
ATXN3-231	ENST00000554994	NDUFA4L2	Q9NRX3	87 aa		3.55	□□□□□ -1.84
ATXN3-231	ENST00000554994	GSKIP	Q9P0R6	139 aa		3.55	□□□□□ -1.84
ATXN3-231	ENST00000554994	PEMT	Q9UBM1	199 aa		3.55	□□□□□ -1.84
ATXN3-231	ENST00000554994	ZMAT5	Q9UDW3	170 aa	Known RBP	3.55	□□□□□ -1.84
ATXN3-231	ENST00000554994	CACNG5	Q9UF02	275 aa		3.55	□□□□□ -1.84
ATXN3-231	ENST00000554994	AGRN	O00468	2067 aa		3.55	□□□□□ -1.84
ATXN3-231	ENST00000554994	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	3.54	□□□□□ -1.84
ATXN3-231	ENST00000554994	TRBV9	A0A0B4J1U6	114 aa		3.54	□□□□□ -1.84
ATXN3-231	ENST00000554994		A0A0G2JRQ6	117 aa		3.54	□□□□□ -1.84
ATXN3-231	ENST00000554994	FAM240B	A0A1B0GVZ2	78 aa		3.54	□□□□□ -1.84
ATXN3-231	ENST00000554994	IGLC7	A0M8Q6	106 aa		3.54	□□□□□ -1.84
ATXN3-231	ENST00000554994	MFSD2B	A6NFX1	497 aa		3.54	□□□□□ -1.84
ATXN3-231	ENST00000554994	FAM25E	A8MYX2	175 aa		3.54	□□□□□ -1.84
ATXN3-231	ENST00000554994	LYRM1	O43325	122 aa		3.54	□□□□□ -1.84
ATXN3-231	ENST00000554994	GNG7	O60262	68 aa		3.54	□□□□□ -1.84
ATXN3-231	ENST00000554994	B3GALNT1	O75752	331 aa		3.54	□□□□□ -1.84
ATXN3-231	ENST00000554994	SFT2D2	O95562	160 aa		3.54	□□□□□ -1.84
ATXN3-231	ENST00000554994	IFNA21	P01568	189 aa		3.54	□□□□□ -1.84
ATXN3-231	ENST00000554994	CRYGC	P07315	174 aa		3.54	□□□□□ -1.84
ATXN3-231	ENST00000554994	SULT1A3	P0DMM9	295 aa		3.54	□□□□□ -1.84
ATXN3-231	ENST00000554994	SULT1A4	P0DMN0	295 aa		3.54	□□□□□ -1.84
ATXN3-231	ENST00000554994	SPN	P16150	400 aa		3.54	□□□□□ -1.84
ATXN3-231	ENST00000554994	ANXA7	P20073	488 aa	Known RBP	3.54	□□□□□ -1.84
ATXN3-231	ENST00000554994	UCP1	P25874	307 aa		3.54	□□□□□ -1.84
ATXN3-231	ENST00000554994	EIF2B2	P49770	351 aa	Known RBP	3.54	□□□□□ -1.84
ATXN3-231	ENST00000554994	MFAP4	P55083	255 aa		3.54	□□□□□ -1.84
ATXN3-231	ENST00000554994	SPCS3	P61009	180 aa		3.54	□□□□□ -1.84
ATXN3-231	ENST00000554994	PRCD	Q00LT1	54 aa		3.54	□□□□□ -1.84
ATXN3-231	ENST00000554994	EGFEM1P	Q0D2K5	195 aa		3.54	□□□□□ -1.84
ATXN3-231	ENST00000554994	PPP1R1A	Q13522	171 aa		3.54	□□□□□ -1.84
ATXN3-231	ENST00000554994	KLF5	Q13887	457 aa	Predicted RBP	3.54	□□□□□ -1.84
ATXN3-231	ENST00000554994	RBMS2	Q15434	407 aa	Known RBP	3.54	□□□□□ -1.84
ATXN3-231	ENST00000554994	TMEM128	Q5BJH2	165 aa		3.54	□□□□□ -1.84
ATXN3-231	ENST00000554994	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	3.54	□□□□□ -1.84
ATXN3-231	ENST00000554994	ZNF429	Q86V71	674 aa		3.54	□□□□□ -1.84
ATXN3-231	ENST00000554994	CADM3	Q8N126	398 aa		3.54	□□□□□ -1.84
ATXN3-231	ENST00000554994	DUSP18	Q8NEJ0	188 aa		3.54	□□□□□ -1.84
ATXN3-231	ENST00000554994	OR9G4	Q8NGQ1	327 aa		3.54	□□□□□ -1.84
ATXN3-231	ENST00000554994	OR1L6	Q8NGR2	347 aa		3.54	□□□□□ -1.84
ATXN3-231	ENST00000554994	OR5B3	Q8NH48	314 aa		3.54	□□□□□ -1.84
ATXN3-231	ENST00000554994	LHFPL5	Q8TAF8	219 aa		3.54	□□□□□ -1.84
ATXN3-231	ENST00000554994	MYOZ3	Q8TDC0	251 aa		3.54	□□□□□ -1.84
ATXN3-231	ENST00000554994	TRIM63	Q969Q1	353 aa		3.54	□□□□□ -1.84
ATXN3-231	ENST00000554994	TMEM230	Q96A57	120 aa		3.54	□□□□□ -1.84
ATXN3-231	ENST00000554994	SDHC	Q99643	169 aa	Predicted RBP	3.54	□□□□□ -1.84
ATXN3-231	ENST00000554994	C1orf43	Q9BWL3	253 aa		3.54	□□□□□ -1.84
ATXN3-231	ENST00000554994	MAGT1	Q9H0U3	335 aa		3.54	□□□□□ -1.84
ATXN3-231	ENST00000554994	RBKS	Q9H477	322 aa		3.54	□□□□□ -1.84
ATXN3-231	ENST00000554994	FAM212B	Q9NTI7	297 aa	Predicted RBP	3.54	□□□□□ -1.84
ATXN3-231	ENST00000554994	TMEM14B	Q9NUH8	114 aa		3.54	□□□□□ -1.84
ATXN3-231	ENST00000554994	F11R	Q9Y624	299 aa	Known RBP	3.54	□□□□□ -1.84
ATXN3-231	ENST00000554994	IGKV3-7	A0A075B6H7	116 aa		3.53	□□□□□ -1.84
ATXN3-231	ENST00000554994	IGLV11-55	A0A075B6I3	123 aa		3.53	□□□□□ -1.84
ATXN3-231	ENST00000554994	IGHV3OR16-13	A0A075B7E8	117 aa		3.53	□□□□□ -1.84
ATXN3-231	ENST00000554994	IGHV3-49	A0A0A0MS15	119 aa		3.53	□□□□□ -1.84
ATXN3-231	ENST00000554994	IGHV3-74	A0A0B4J1X5	117 aa		3.53	□□□□□ -1.84
ATXN3-231	ENST00000554994	C9orf170	A2RU37	121 aa		3.53	□□□□□ -1.84
ATXN3-231	ENST00000554994	C5orf51	A6NDU8	294 aa		3.53	□□□□□ -1.84
ATXN3-231	ENST00000554994	BOLA2-SMG1P6	H3BVE0	249 aa		3.53	□□□□□ -1.84
ATXN3-231	ENST00000554994	BMPR1B	O00238	502 aa		3.53	□□□□□ -1.84
ATXN3-231	ENST00000554994	WRB	O00258	174 aa		3.53	□□□□□ -1.84
ATXN3-231	ENST00000554994	PLA2G10	O15496	165 aa		3.53	□□□□□ -1.84
ATXN3-231	ENST00000554994	NUPL2	O15504	423 aa	Known RBP	3.53	□□□□□ -1.84
ATXN3-231	ENST00000554994	NDUFB6	O95139	128 aa		3.53	□□□□□ -1.84
ATXN3-231	ENST00000554994	LY6G6C	O95867	125 aa		3.53	□□□□□ -1.84
ATXN3-231	ENST00000554994	MT-CO2	P00403	227 aa		3.53	□□□□□ -1.84
ATXN3-231	ENST00000554994	TCRB	P04435	133 aa		3.53	□□□□□ -1.84
ATXN3-231	ENST00000554994	IFNA4	P05014	189 aa		3.53	□□□□□ -1.84
ATXN3-231	ENST00000554994	OR4E1	P0C645	316 aa		3.53	□□□□□ -1.84
ATXN3-231	ENST00000554994	IAPP	P10997	89 aa		3.53	□□□□□ -1.84
ATXN3-231	ENST00000554994	GP9	P14770	177 aa		3.53	□□□□□ -1.84
ATXN3-231	ENST00000554994	OPRK1	P41145	380 aa		3.53	□□□□□ -1.84
ATXN3-231	ENST00000554994	INSL3	P51460	131 aa		3.53	□□□□□ -1.84
ATXN3-231	ENST00000554994	MFAP2	P55001	183 aa		3.53	□□□□□ -1.84
ATXN3-231	ENST00000554994	UBE2M	P61081	183 aa	Known RBP	3.53	□□□□□ -1.84
ATXN3-231	ENST00000554994	SUPT4H1	P63272	117 aa	Known RBP	3.53	□□□□□ -1.84
ATXN3-231	ENST00000554994	SRPX	P78539	464 aa		3.53	□□□□□ -1.84
ATXN3-231	ENST00000554994	SMCO1	Q147U7	214 aa		3.53	□□□□□ -1.84
ATXN3-231	ENST00000554994	ANKRD55	Q3KP44	614 aa		3.53	□□□□□ -1.84
ATXN3-231	ENST00000554994	RBPMS2	Q6ZRY4	209 aa	Known RBP	3.53	□□□□□ -1.84
ATXN3-231	ENST00000554994	AKAP14	Q86UN6	197 aa		3.53	□□□□□ -1.84
ATXN3-231	ENST00000554994	FAM219A	Q8IW50	185 aa		3.53	□□□□□ -1.84
ATXN3-231	ENST00000554994	RPP25L	Q8N5L8	163 aa	Known RBP	3.53	□□□□□ -1.84
ATXN3-231	ENST00000554994	OR52B4	Q8NGK2	314 aa		3.53	□□□□□ -1.84
ATXN3-231	ENST00000554994	OR1P1	Q8NH06	330 aa		3.53	□□□□□ -1.84
ATXN3-231	ENST00000554994	COQ8A	Q8NI60	647 aa		3.53	□□□□□ -1.84
ATXN3-231	ENST00000554994	ENKUR	Q8TC29	256 aa		3.53	□□□□□ -1.84
ATXN3-231	ENST00000554994	VN1R17P	Q8TDU5	208 aa		3.53	□□□□□ -1.84
ATXN3-231	ENST00000554994	C7orf50	Q9BRJ6	194 aa	Known RBP	3.53	□□□□□ -1.84
ATXN3-231	ENST00000554994	SRSF8	Q9BRL6	282 aa	Known RBP	3.53	□□□□□ -1.84

Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms