RNA–Protein interactions for RNA: ENST00000554975.5

SHMT2-216, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-216ENST00000554975 TMEM144Q7Z5S9 345 aa8.88□□□□□ -0.99
SHMT2-216ENST00000554975 PNKDQ8N490 385 aa8.88□□□□□ -0.99
SHMT2-216ENST00000554975 TMEM167AQ8TBQ9 72 aa8.88□□□□□ -0.99
SHMT2-216ENST00000554975 C2CD4CQ8TF44 421 aa8.88□□□□□ -0.99
SHMT2-216ENST00000554975 FLYWCH2Q96CP2 140 aaKnown RBP8.88□□□□□ -0.99
SHMT2-216ENST00000554975 UHRF2Q96PU4 802 aa8.88□□□□□ -0.99
SHMT2-216ENST00000554975 MGST2Q99735 147 aa8.88□□□□□ -0.99
SHMT2-216ENST00000554975 MRPL32Q9BYC8 188 aaKnown RBP8.88□□□□□ -0.99
SHMT2-216ENST00000554975 MRPL20Q9BYC9 149 aaKnown RBP8.88□□□□□ -0.99
SHMT2-216ENST00000554975 TMEM167BQ9NRX6 74 aa8.88□□□□□ -0.99
SHMT2-216ENST00000554975 DOK5Q9P104 306 aa8.88□□□□□ -0.99
SHMT2-216ENST00000554975 SLC45A2Q9UMX9 530 aa8.88□□□□□ -0.99
SHMT2-216ENST00000554975 EPPK1P58107 5090 aaKnown RBP8.87□□□□□ -0.99
SHMT2-216ENST00000554975 DVL1O14640 695 aa8.87□□□□□ -0.99
SHMT2-216ENST00000554975 CA2P00918 260 aa8.87□□□□□ -0.99
SHMT2-216ENST00000554975 CT45A6P0DMU7 189 aa8.87□□□□□ -0.99
SHMT2-216ENST00000554975 CT45A5P0DMU8 189 aa8.87□□□□□ -0.99
SHMT2-216ENST00000554975 CT45A7P0DMV0 189 aa8.87□□□□□ -0.99
SHMT2-216ENST00000554975 GPX4P36969 197 aaPredicted RBP8.87□□□□□ -0.99
SHMT2-216ENST00000554975 RPL35P42766 123 aaKnown RBP8.87□□□□□ -0.99
SHMT2-216ENST00000554975 LGALS7P47929 136 aa8.87□□□□□ -0.99
SHMT2-216ENST00000554975 KIAA0141Q14154 515 aaPredicted RBP8.87□□□□□ -0.99
SHMT2-216ENST00000554975 RUSC1-AS1Q66K80 236 aa8.87□□□□□ -0.99
SHMT2-216ENST00000554975 DUX4L9Q6RFH8 374 aaPredicted RBP8.87□□□□□ -0.99
SHMT2-216ENST00000554975 Q6YL49 198 aa8.87□□□□□ -0.99
SHMT2-216ENST00000554975 ZNF841Q6ZN19 808 aa8.87□□□□□ -0.99
SHMT2-216ENST00000554975 TGIF2LXQ8IUE1 241 aa8.87□□□□□ -0.99
SHMT2-216ENST00000554975 VKORC1L1Q8N0U8 176 aa8.87□□□□□ -0.99
SHMT2-216ENST00000554975 ZFP82Q8N141 532 aa8.87□□□□□ -0.99
SHMT2-216ENST00000554975 Q8N7P7 452 aa8.87□□□□□ -0.99
SHMT2-216ENST00000554975 RNASEH2CQ8TDP1 164 aaKnown RBP8.87□□□□□ -0.99
SHMT2-216ENST00000554975 Q8WTZ3 238 aa8.87□□□□□ -0.99
SHMT2-216ENST00000554975 TMEM190Q8WZ59 177 aa8.87□□□□□ -0.99
SHMT2-216ENST00000554975 LEAP2Q969E1 77 aa8.87□□□□□ -0.99
SHMT2-216ENST00000554975 RPUSD4Q96CM3 377 aaKnown RBP8.87□□□□□ -0.99
SHMT2-216ENST00000554975 FAM210BQ96KR6 192 aa8.87□□□□□ -0.99
SHMT2-216ENST00000554975 HINT2Q9BX68 163 aa8.87□□□□□ -0.99
SHMT2-216ENST00000554975 BIRC6Q9NR09 4857 aa8.87□□□□□ -0.99
SHMT2-216ENST00000554975 TRAV3A0A0B4J244 114 aa8.86□□□□□ -0.99
SHMT2-216ENST00000554975 A0A1W2PPE3 182 aa8.86□□□□□ -0.99
SHMT2-216ENST00000554975 ZNF98A6NK75 572 aa8.86□□□□□ -0.99
SHMT2-216ENST00000554975 C22orf46C9J442 243 aa8.86□□□□□ -0.99
SHMT2-216ENST00000554975 TNFRSF13BO14836 293 aaPredicted RBP8.86□□□□□ -0.99
SHMT2-216ENST00000554975 PAGE4O60829 102 aa8.86□□□□□ -0.99
SHMT2-216ENST00000554975 IGHV3-7P01780 117 aa8.86□□□□□ -0.99
SHMT2-216ENST00000554975 FBP1P09467 338 aa8.86□□□□□ -0.99
SHMT2-216ENST00000554975 MEOX2P50222 304 aa8.86□□□□□ -0.99
SHMT2-216ENST00000554975 LINC00205P59089 165 aa8.86□□□□□ -0.99
SHMT2-216ENST00000554975 BPIFB3P59826 476 aa8.86□□□□□ -0.99
SHMT2-216ENST00000554975 RPL19P84098 196 aaKnown RBP8.86□□□□□ -0.99
SHMT2-216ENST00000554975 ETFRF1Q6IPR1 90 aa8.86□□□□□ -0.99
SHMT2-216ENST00000554975 PQLC2Q6ZP29 291 aa8.86□□□□□ -0.99
SHMT2-216ENST00000554975 STPG3Q8N7X2 389 aa8.86□□□□□ -0.99
SHMT2-216ENST00000554975 C11orf52Q96A22 123 aa8.86□□□□□ -0.99
SHMT2-216ENST00000554975 NABP2Q9BQ15 211 aa8.86□□□□□ -0.99
SHMT2-216ENST00000554975 LY96Q9Y6Y9 160 aa8.86□□□□□ -0.99
SHMT2-216ENST00000554975 TRAV9-1A0A075B6T8 112 aa8.85□□□□□ -0.99
SHMT2-216ENST00000554975 CORTO00230 105 aa8.85□□□□□ -0.99
SHMT2-216ENST00000554975 YIF1AO95070 293 aa8.85□□□□□ -0.99
SHMT2-216ENST00000554975 ARL14EPLP0DKL9 152 aa8.85□□□□□ -0.99
SHMT2-216ENST00000554975 PPIAL4GP0DN37 164 aa8.85□□□□□ -0.99
SHMT2-216ENST00000554975 IGHV1-8P0DP01 117 aa8.85□□□□□ -0.99
SHMT2-216ENST00000554975 CCL3L1P16619 93 aa8.85□□□□□ -0.99
SHMT2-216ENST00000554975 PRRX1P54821 245 aa8.85□□□□□ -0.99
SHMT2-216ENST00000554975 FAM3BP58499 235 aaPredicted RBP8.85□□□□□ -0.99
SHMT2-216ENST00000554975 SNRPEP62304 92 aaKnown RBP8.85□□□□□ -0.99
SHMT2-216ENST00000554975 SELENOTP62341 195 aa8.85□□□□□ -0.99
SHMT2-216ENST00000554975 RPL23P62829 140 aaKnown RBP8.85□□□□□ -0.99
SHMT2-216ENST00000554975 PRR20EP86478 221 aa8.85□□□□□ -0.99
SHMT2-216ENST00000554975 PRR20CP86479 221 aa8.85□□□□□ -0.99
SHMT2-216ENST00000554975 PRR20DP86480 221 aa8.85□□□□□ -0.99
SHMT2-216ENST00000554975 PRR20BP86481 221 aa8.85□□□□□ -0.99
SHMT2-216ENST00000554975 PRR20AP86496 221 aa8.85□□□□□ -0.99
SHMT2-216ENST00000554975 CD69Q07108 199 aa8.85□□□□□ -0.99
SHMT2-216ENST00000554975 ARSJQ5FYB0 599 aaPredicted RBP8.85□□□□□ -0.99
SHMT2-216ENST00000554975 MIC13Q5XKP0 118 aa8.85□□□□□ -0.99
SHMT2-216ENST00000554975 TMEM200BQ69YZ2 307 aa8.85□□□□□ -0.99
SHMT2-216ENST00000554975 SLC16A13Q7RTY0 426 aa8.85□□□□□ -0.99
SHMT2-216ENST00000554975 MMD2Q8IY49 270 aa8.85□□□□□ -0.99
SHMT2-216ENST00000554975 ABHD12Q8N2K0 398 aa8.85□□□□□ -0.99
SHMT2-216ENST00000554975 IMMP2LQ96T52 175 aa8.85□□□□□ -0.99
SHMT2-216ENST00000554975 PFDN5Q99471 154 aa8.85□□□□□ -0.99
SHMT2-216ENST00000554975 C12orf57Q99622 126 aa8.85□□□□□ -0.99
SHMT2-216ENST00000554975 TMEM133Q9H2Q1 129 aa8.85□□□□□ -0.99
SHMT2-216ENST00000554975 AURKAIP1Q9NWT8 199 aaPredicted RBP8.85□□□□□ -0.99
SHMT2-216ENST00000554975 PPP5D1E7EU14 171 aa8.84□□□□□ -0.99
SHMT2-216ENST00000554975 MMP23AO75900 390 aa8.84□□□□□ -0.99
SHMT2-216ENST00000554975 TOX4O94842 621 aa8.84□□□□□ -0.99
SHMT2-216ENST00000554975 LIPFP07098 398 aa8.84□□□□□ -0.99
SHMT2-216ENST00000554975 RNASE2P10153 161 aaKnown RBP8.84□□□□□ -0.99
SHMT2-216ENST00000554975 AREGP15514 252 aa8.84□□□□□ -0.99
SHMT2-216ENST00000554975 GCHFRP30047 84 aa8.84□□□□□ -0.99
SHMT2-216ENST00000554975 GALR1P47211 349 aa8.84□□□□□ -0.99
SHMT2-216ENST00000554975 DLX6P56179 175 aa8.84□□□□□ -0.99
SHMT2-216ENST00000554975 ERVFRD-1P60508 538 aa8.84□□□□□ -0.99
SHMT2-216ENST00000554975 RPS16P62249 146 aaKnown RBP8.84□□□□□ -0.99
SHMT2-216ENST00000554975 ARF6P62330 175 aa8.84□□□□□ -0.99
SHMT2-216ENST00000554975 FABP9Q0Z7S8 132 aa8.84□□□□□ -0.99
SHMT2-216ENST00000554975 OXLD1Q5BKU9 147 aa8.84□□□□□ -0.99
SHMT2-216ENST00000554975 CST9LP1Q5W188 147 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms