RNA–Protein interactions for RNA: ENST00000554808.1

LINC01397-201, Transcript of long intergenic non-protein coding RNA 1397, humanhuman

TSL 4 BASIC

Gene LINC01397, Length 579 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01397-201ENST00000554808 TMEM144Q7Z5S9 345 aa6.2□□□□□ -1.42
LINC01397-201ENST00000554808 S100A7AQ86SG5 101 aa6.2□□□□□ -1.42
LINC01397-201ENST00000554808 LINC00482Q8N8I6 264 aa6.2□□□□□ -1.42
LINC01397-201ENST00000554808 INO80EQ8NBZ0 244 aaPredicted RBP6.2□□□□□ -1.42
LINC01397-201ENST00000554808 RCC1LQ96I51 464 aaKnown RBP6.2□□□□□ -1.42
LINC01397-201ENST00000554808 TRGV9Q99603 122 aa6.2□□□□□ -1.42
LINC01397-201ENST00000554808 ELOVL1Q9BW60 279 aa6.2□□□□□ -1.42
LINC01397-201ENST00000554808 OR5AC2Q9NZP5 309 aa6.2□□□□□ -1.42
LINC01397-201ENST00000554808 MBD2Q9UBB5 411 aa6.2□□□□□ -1.42
LINC01397-201ENST00000554808 ZMAT5Q9UDW3 170 aaKnown RBP6.2□□□□□ -1.42
LINC01397-201ENST00000554808 PKD1L1Q8TDX9 2849 aa6.2□□□□□ -1.42
LINC01397-201ENST00000554808 TGP01266 2768 aa6.19□□□□□ -1.42
LINC01397-201ENST00000554808 FAM24AA6NFZ4 105 aa6.19□□□□□ -1.42
LINC01397-201ENST00000554808 ZFP92A6NM28 416 aa6.19□□□□□ -1.42
LINC01397-201ENST00000554808 F8W735 103 aaPredicted RBP6.19□□□□□ -1.42
LINC01397-201ENST00000554808 TSPAN15O95858 294 aa6.19□□□□□ -1.42
LINC01397-201ENST00000554808 TOMM40O96008 361 aa6.19□□□□□ -1.42
LINC01397-201ENST00000554808 CTSGP08311 255 aa6.19□□□□□ -1.42
LINC01397-201ENST00000554808 RPL12P30050 165 aaKnown RBP6.19□□□□□ -1.42
LINC01397-201ENST00000554808 DEFA5Q01523 94 aa6.19□□□□□ -1.42
LINC01397-201ENST00000554808 EWSR1Q01844 656 aaKnown RBP eCLIP6.19□□□□□ -1.42
LINC01397-201ENST00000554808 SLC38A11Q08AI6 406 aa6.19□□□□□ -1.42
LINC01397-201ENST00000554808 RAB31Q13636 194 aa6.19□□□□□ -1.42
LINC01397-201ENST00000554808 KLF5Q13887 457 aaPredicted RBP6.19□□□□□ -1.42
LINC01397-201ENST00000554808 GAMTQ14353 236 aa6.19□□□□□ -1.42
LINC01397-201ENST00000554808 TEPPQ6URK8 271 aa6.19□□□□□ -1.42
LINC01397-201ENST00000554808 C18orf65Q6ZTR6 163 aa6.19□□□□□ -1.42
LINC01397-201ENST00000554808 ZNF546Q86UE3 836 aa6.19□□□□□ -1.42
LINC01397-201ENST00000554808 THAP8Q8NA92 274 aa6.19□□□□□ -1.42
LINC01397-201ENST00000554808 NPIPB3Q92617 1050 aa6.19□□□□□ -1.42
LINC01397-201ENST00000554808 MARC2Q969Z3 335 aa6.19□□□□□ -1.42
LINC01397-201ENST00000554808 WDR89Q96FK6 387 aaPredicted RBP6.19□□□□□ -1.42
LINC01397-201ENST00000554808 AQP10Q96PS8 301 aa6.19□□□□□ -1.42
LINC01397-201ENST00000554808 TMEM147Q9BVK8 224 aa6.19□□□□□ -1.42
LINC01397-201ENST00000554808 ZC4H2Q9NQZ6 224 aa6.19□□□□□ -1.42
LINC01397-201ENST00000554808 KCNIP2Q9NS61 270 aa6.19□□□□□ -1.42
LINC01397-201ENST00000554808 UQCC1Q9NVA1 299 aa6.19□□□□□ -1.42
LINC01397-201ENST00000554808 SIGLEC8Q9NYZ4 499 aa6.19□□□□□ -1.42
LINC01397-201ENST00000554808 PFDN2Q9UHV9 154 aa6.19□□□□□ -1.42
LINC01397-201ENST00000554808 RNF24Q9Y225 148 aa6.19□□□□□ -1.42
LINC01397-201ENST00000554808 UFC1Q9Y3C8 167 aa6.19□□□□□ -1.42
LINC01397-201ENST00000554808 HSPB11Q9Y547 144 aa6.19□□□□□ -1.42
LINC01397-201ENST00000554808 VWFP04275 2813 aa6.19□□□□□ -1.42
LINC01397-201ENST00000554808 IGHV3-21A0A0B4J1V1 117 aa6.18□□□□□ -1.42
LINC01397-201ENST00000554808 IGSF23A1L1A6 192 aa6.18□□□□□ -1.42
LINC01397-201ENST00000554808 SMCO3A2RU48 225 aa6.18□□□□□ -1.42
LINC01397-201ENST00000554808 HMSDA8MTL9 139 aa6.18□□□□□ -1.42
LINC01397-201ENST00000554808 PPP5D1E7EU14 171 aa6.18□□□□□ -1.42
LINC01397-201ENST00000554808 H0YIZ8 118 aa6.18□□□□□ -1.42
LINC01397-201ENST00000554808 K7EMT4 169 aa6.18□□□□□ -1.42
LINC01397-201ENST00000554808 CCNKO75909 580 aa6.18□□□□□ -1.42
LINC01397-201ENST00000554808 CST7O76096 145 aa6.18□□□□□ -1.42
LINC01397-201ENST00000554808 IGHV3-23P01764 117 aa6.18□□□□□ -1.42
LINC01397-201ENST00000554808 CD5P06127 495 aa6.18□□□□□ -1.42
LINC01397-201ENST00000554808 IGLC1P0CG04 106 aa6.18□□□□□ -1.42
LINC01397-201ENST00000554808 AP2S1P53680 142 aaPredicted RBP6.18□□□□□ -1.42
LINC01397-201ENST00000554808 SLURP1P55000 103 aa6.18□□□□□ -1.42
LINC01397-201ENST00000554808 ZNF266Q14584 549 aa6.18□□□□□ -1.42
LINC01397-201ENST00000554808 ZNF345Q14585 488 aa6.18□□□□□ -1.42
LINC01397-201ENST00000554808 VWC2Q2TAL6 325 aa6.18□□□□□ -1.42
LINC01397-201ENST00000554808 C9orf66Q5T8R8 295 aa6.18□□□□□ -1.42
LINC01397-201ENST00000554808 PXDC1Q5TGL8 231 aa6.18□□□□□ -1.42
LINC01397-201ENST00000554808 TREML4Q6UXN2 200 aa6.18□□□□□ -1.42
LINC01397-201ENST00000554808 AKAP14Q86UN6 197 aa6.18□□□□□ -1.42
LINC01397-201ENST00000554808 TCTE3Q8IZS6 198 aa6.18□□□□□ -1.42
LINC01397-201ENST00000554808 WFDC9Q8NEX5 89 aa6.18□□□□□ -1.42
LINC01397-201ENST00000554808 BPIFCQ8NFQ6 507 aa6.18□□□□□ -1.42
LINC01397-201ENST00000554808 OR51G1Q8NGK1 321 aa6.18□□□□□ -1.42
LINC01397-201ENST00000554808 OR9G4Q8NGQ1 327 aa6.18□□□□□ -1.42
LINC01397-201ENST00000554808 OR5C1Q8NGR4 320 aa6.18□□□□□ -1.42
LINC01397-201ENST00000554808 Q8WTZ3 238 aa6.18□□□□□ -1.42
LINC01397-201ENST00000554808 TMEM190Q8WZ59 177 aa6.18□□□□□ -1.42
LINC01397-201ENST00000554808 DLX4Q92988 240 aaPredicted RBP6.18□□□□□ -1.42
LINC01397-201ENST00000554808 ACY3Q96HD9 319 aa6.18□□□□□ -1.42
LINC01397-201ENST00000554808 NARS2Q96I59 477 aaKnown RBP6.18□□□□□ -1.42
LINC01397-201ENST00000554808 RNF126Q9BV68 326 aa6.18□□□□□ -1.42
LINC01397-201ENST00000554808 PARD6GQ9BYG4 376 aaPredicted RBP6.18□□□□□ -1.42
LINC01397-201ENST00000554808 DAZ1Q9NQZ3 744 aaKnown RBP6.18□□□□□ -1.42
LINC01397-201ENST00000554808 S4R3C0 116 aa6.18□□□□□ -1.42
LINC01397-201ENST00000554808 FXYD6-FXYD2A0A087WZ82 144 aa6.17□□□□□ -1.42
LINC01397-201ENST00000554808 TRAV14DV4A0A0A6YYC5 116 aa6.17□□□□□ -1.42
LINC01397-201ENST00000554808 A0A1W2PS18 150 aa6.17□□□□□ -1.42
LINC01397-201ENST00000554808 TAAR5O14804 337 aa6.17□□□□□ -1.42
LINC01397-201ENST00000554808 OR2C1O95371 312 aa6.17□□□□□ -1.42
LINC01397-201ENST00000554808 IGKV1-17P01599 117 aa6.17□□□□□ -1.42
LINC01397-201ENST00000554808 TRBV12-3P01733 135 aa6.17□□□□□ -1.42
LINC01397-201ENST00000554808 IGHV3-48P01763 117 aa6.17□□□□□ -1.42
LINC01397-201ENST00000554808 ADMP35318 185 aa6.17□□□□□ -1.42
LINC01397-201ENST00000554808 OR2F1Q13607 317 aa6.17□□□□□ -1.42
LINC01397-201ENST00000554808 TMEM217Q8N7C4 229 aa6.17□□□□□ -1.42
LINC01397-201ENST00000554808 OR2K2Q8NGT1 345 aa6.17□□□□□ -1.42
LINC01397-201ENST00000554808 ATP5SQ99766 215 aa6.17□□□□□ -1.42
LINC01397-201ENST00000554808 CHRDL1Q9BU40 450 aa6.17□□□□□ -1.42
LINC01397-201ENST00000554808 TMEM231Q9H6L2 316 aa6.17□□□□□ -1.42
LINC01397-201ENST00000554808 MRPL27Q9P0M9 148 aaKnown RBP6.17□□□□□ -1.42
LINC01397-201ENST00000554808 SLC45A2Q9UMX9 530 aa6.17□□□□□ -1.42
LINC01397-201ENST00000554808 TNFSF18Q9UNG2 199 aa6.17□□□□□ -1.42
LINC01397-201ENST00000554808 UBE2L5PA0A1B0GUS4 154 aa6.16□□□□□ -1.42
LINC01397-201ENST00000554808 ZNF320A2RRD8 509 aa6.16□□□□□ -1.42
LINC01397-201ENST00000554808 C17orf112F2Z3M2 114 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms