RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 MYCNOSP40205 109 aa9.7□□□□□ -0.86
SHMT2-214ENST00000554604 CCL20P78556 96 aa9.7□□□□□ -0.86
SHMT2-214ENST00000554604 BTN1A1Q13410 526 aa9.7□□□□□ -0.86
SHMT2-214ENST00000554604 PMS2P11Q13670 270 aa9.7□□□□□ -0.86
SHMT2-214ENST00000554604 ZNF506Q5JVG8 444 aa9.7□□□□□ -0.86
SHMT2-214ENST00000554604 LCNL1Q6ZST4 164 aa9.7□□□□□ -0.86
SHMT2-214ENST00000554604 SLC24A4Q8NFF2 622 aa9.7□□□□□ -0.86
SHMT2-214ENST00000554604 TMEM167AQ8TBQ9 72 aa9.7□□□□□ -0.86
SHMT2-214ENST00000554604 MRAPQ8TCY5 172 aa9.7□□□□□ -0.86
SHMT2-214ENST00000554604 SFT2D1Q8WV19 159 aa9.7□□□□□ -0.86
SHMT2-214ENST00000554604 DPF1Q92782 380 aa9.7□□□□□ -0.86
SHMT2-214ENST00000554604 HARBI1Q96MB7 349 aa9.7□□□□□ -0.86
SHMT2-214ENST00000554604 NPCDR1Q9BY65 106 aa9.7□□□□□ -0.86
SHMT2-214ENST00000554604 GPR61Q9BZJ8 451 aa9.7□□□□□ -0.86
SHMT2-214ENST00000554604 TEX50A0A1B0GTY4 177 aa9.69□□□□□ -0.86
SHMT2-214ENST00000554604 DNASE2O00115 360 aaPredicted RBP9.69□□□□□ -0.86
SHMT2-214ENST00000554604 CCL24O00175 119 aa9.69□□□□□ -0.86
SHMT2-214ENST00000554604 RRHO14718 337 aa9.69□□□□□ -0.86
SHMT2-214ENST00000554604 NPY1RP25929 384 aa9.69□□□□□ -0.86
SHMT2-214ENST00000554604 CDX1P47902 265 aaPredicted RBP9.69□□□□□ -0.86
SHMT2-214ENST00000554604 PPT1P50897 306 aa9.69□□□□□ -0.86
SHMT2-214ENST00000554604 ZNF726P1Q15940 193 aa9.69□□□□□ -0.86
SHMT2-214ENST00000554604 ACSM6Q6P461 480 aa9.69□□□□□ -0.86
SHMT2-214ENST00000554604 ZNF709Q8N972 641 aa9.69□□□□□ -0.86
SHMT2-214ENST00000554604 NPBQ8NG41 125 aa9.69□□□□□ -0.86
SHMT2-214ENST00000554604 ABHD5Q8WTS1 349 aa9.69□□□□□ -0.86
SHMT2-214ENST00000554604 TMEM170AQ8WVE7 144 aa9.69□□□□□ -0.86
SHMT2-214ENST00000554604 DUX3Q96PT4 197 aa9.69□□□□□ -0.86
SHMT2-214ENST00000554604 MCRIP2Q9BUT9 160 aaKnown RBP9.69□□□□□ -0.86
SHMT2-214ENST00000554604 SLC35B3Q9H1N7 401 aa9.69□□□□□ -0.86
SHMT2-214ENST00000554604 VSIRQ9H7M9 311 aa9.69□□□□□ -0.86
SHMT2-214ENST00000554604 PLEKHA3Q9HB20 300 aa9.69□□□□□ -0.86
SHMT2-214ENST00000554604 AURKAIP1Q9NWT8 199 aaPredicted RBP9.69□□□□□ -0.86
SHMT2-214ENST00000554604 ZNF580Q9UK33 172 aa9.69□□□□□ -0.86
SHMT2-214ENST00000554604 IGHV7-81A0A0B4J1V7 117 aa9.68□□□□□ -0.86
SHMT2-214ENST00000554604 TRAV41A0A0B4J266 112 aa9.68□□□□□ -0.86
SHMT2-214ENST00000554604 ATP6V0E1O15342 81 aa9.68□□□□□ -0.86
SHMT2-214ENST00000554604 NDUFA3O95167 84 aa9.68□□□□□ -0.86
SHMT2-214ENST00000554604 HSPB1P04792 205 aaKnown RBP9.68□□□□□ -0.86
SHMT2-214ENST00000554604 LGALS7P47929 136 aa9.68□□□□□ -0.86
SHMT2-214ENST00000554604 RPS16P62249 146 aaKnown RBP9.68□□□□□ -0.86
SHMT2-214ENST00000554604 CFHR3Q02985 330 aa9.68□□□□□ -0.86
SHMT2-214ENST00000554604 DEFB136Q30KP8 78 aa9.68□□□□□ -0.86
SHMT2-214ENST00000554604 BSXQ3C1V8 233 aa9.68□□□□□ -0.86
SHMT2-214ENST00000554604 VMA21Q3ZAQ7 101 aa9.68□□□□□ -0.86
SHMT2-214ENST00000554604 KHDC3LQ587J8 217 aa9.68□□□□□ -0.86
SHMT2-214ENST00000554604 RNF152Q8N8N0 203 aa9.68□□□□□ -0.86
SHMT2-214ENST00000554604 RAX2Q96IS3 184 aa9.68□□□□□ -0.86
SHMT2-214ENST00000554604 FBXL15Q9H469 300 aa9.68□□□□□ -0.86
SHMT2-214ENST00000554604 KCNIP2Q9NS61 270 aa9.68□□□□□ -0.86
SHMT2-214ENST00000554604 TNCP24821 2201 aa9.67□□□□□ -0.86
SHMT2-214ENST00000554604 CTXND1A0A1B0GTU2 59 aa9.67□□□□□ -0.86
SHMT2-214ENST00000554604 LOC102723971A0A1B0GUV8 181 aa9.67□□□□□ -0.86
SHMT2-214ENST00000554604 A0A1B0GV50 99 aa9.67□□□□□ -0.86
SHMT2-214ENST00000554604 MAP1LC3B2A6NCE7 125 aa9.67□□□□□ -0.86
SHMT2-214ENST00000554604 G3V318 75 aa9.67□□□□□ -0.86
SHMT2-214ENST00000554604 NDUFS6O75380 124 aaKnown RBP9.67□□□□□ -0.86
SHMT2-214ENST00000554604 CA2P00918 260 aa9.67□□□□□ -0.86
SHMT2-214ENST00000554604 IGLV2-23P01705 113 aa9.67□□□□□ -0.86
SHMT2-214ENST00000554604 IFNA4P05014 189 aa9.67□□□□□ -0.86
SHMT2-214ENST00000554604 PSMB8P28062 276 aa9.67□□□□□ -0.86
SHMT2-214ENST00000554604 ELLP55199 621 aaPredicted RBP9.67□□□□□ -0.86
SHMT2-214ENST00000554604 RPL8P62917 257 aaKnown RBP9.67□□□□□ -0.86
SHMT2-214ENST00000554604 ICAM4Q14773 271 aa9.67□□□□□ -0.86
SHMT2-214ENST00000554604 ACOT6Q3I5F7 207 aaPredicted RBP9.67□□□□□ -0.86
SHMT2-214ENST00000554604 C2orf83Q53S99 150 aa9.67□□□□□ -0.86
SHMT2-214ENST00000554604 FFAR4Q5NUL3 377 aa9.67□□□□□ -0.86
SHMT2-214ENST00000554604 CLRN3Q8NCR9 226 aa9.67□□□□□ -0.86
SHMT2-214ENST00000554604 OR10G4Q8NGN3 311 aa9.67□□□□□ -0.86
SHMT2-214ENST00000554604 OR1L8Q8NGR8 309 aa9.67□□□□□ -0.86
SHMT2-214ENST00000554604 P2RX4Q99571 388 aa9.67□□□□□ -0.86
SHMT2-214ENST00000554604 RNF5Q99942 180 aa9.67□□□□□ -0.86
SHMT2-214ENST00000554604 ACTR3CQ9C0K3 210 aaPredicted RBP9.67□□□□□ -0.86
SHMT2-214ENST00000554604 COMMD5Q9GZQ3 224 aa9.67□□□□□ -0.86
SHMT2-214ENST00000554604 MAP1LC3BQ9GZQ8 125 aa9.67□□□□□ -0.86
SHMT2-214ENST00000554604 NPVFQ9HCQ7 196 aa9.67□□□□□ -0.86
SHMT2-214ENST00000554604 NDUFA4L2Q9NRX3 87 aa9.67□□□□□ -0.86
SHMT2-214ENST00000554604 SORL1Q92673 2214 aa9.67□□□□□ -0.86
SHMT2-214ENST00000554604 A0A1W2PN81 502 aa9.66□□□□□ -0.86
SHMT2-214ENST00000554604 IFNA1P01562 189 aa9.66□□□□□ -0.86
SHMT2-214ENST00000554604 SRP19P09132 144 aaKnown RBP9.66□□□□□ -0.86
SHMT2-214ENST00000554604 MYOD1P15172 320 aa9.66□□□□□ -0.86
SHMT2-214ENST00000554604 HOXD3P31249 432 aaPredicted RBP9.66□□□□□ -0.86
SHMT2-214ENST00000554604 CHRNA7P36544 502 aa9.66□□□□□ -0.86
SHMT2-214ENST00000554604 OPRK1P41145 380 aa9.66□□□□□ -0.86
SHMT2-214ENST00000554604 NPBWR1P48145 328 aa9.66□□□□□ -0.86
SHMT2-214ENST00000554604 CX3CL1P78423 397 aa9.66□□□□□ -0.86
SHMT2-214ENST00000554604 ECSCRQ19T08 205 aa9.66□□□□□ -0.86
SHMT2-214ENST00000554604 LCN15Q6UWW0 184 aa9.66□□□□□ -0.86
SHMT2-214ENST00000554604 SSX7Q7RTT5 188 aa9.66□□□□□ -0.86
SHMT2-214ENST00000554604 RPP25LQ8N5L8 163 aaKnown RBP9.66□□□□□ -0.86
SHMT2-214ENST00000554604 TEX45Q8NA69 505 aa9.66□□□□□ -0.86
SHMT2-214ENST00000554604 OR10G9Q8NGN4 311 aa9.66□□□□□ -0.86
SHMT2-214ENST00000554604 OR10G7Q8NGN6 311 aa9.66□□□□□ -0.86
SHMT2-214ENST00000554604 C4orf3Q8WVX3 66 aa9.66□□□□□ -0.86
SHMT2-214ENST00000554604 RARRES2Q99969 163 aa9.66□□□□□ -0.86
SHMT2-214ENST00000554604 HINT2Q9BX68 163 aa9.66□□□□□ -0.86
SHMT2-214ENST00000554604 SLC39A9Q9NUM3 307 aa9.66□□□□□ -0.86
SHMT2-214ENST00000554604 METTL1Q9UBP6 276 aaKnown RBP9.66□□□□□ -0.86
SHMT2-214ENST00000554604 TMA7Q9Y2S6 64 aaKnown RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms