RNA–Protein interactions for RNA: ENST00000554556.5

GABRB3-206, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-206ENST00000554556 C1QTNF4Q9BXJ3 329 aa16.11■□□□□ 0.17
GABRB3-206ENST00000554556 HEYLQ9NQ87 328 aaPredicted RBP16.11■□□□□ 0.17
GABRB3-206ENST00000554556 EXTL2Q9UBQ6 330 aa16.11■□□□□ 0.17
GABRB3-206ENST00000554556 ELOA3CA0A087WX78 387 aaPredicted RBP16.1■□□□□ 0.17
GABRB3-206ENST00000554556 RAB3DO95716 219 aa16.1■□□□□ 0.17
GABRB3-206ENST00000554556 C2orf83Q53S99 150 aa16.1■□□□□ 0.17
GABRB3-206ENST00000554556 PSMG4Q5JS54 123 aa16.1■□□□□ 0.17
GABRB3-206ENST00000554556 Q6ZRM9 215 aa16.1■□□□□ 0.17
GABRB3-206ENST00000554556 MARCH1Q8TCQ1 289 aa16.1■□□□□ 0.17
GABRB3-206ENST00000554556 RNASEH2CQ8TDP1 164 aaKnown RBP16.1■□□□□ 0.17
GABRB3-206ENST00000554556 RNF126Q9BV68 326 aa16.1■□□□□ 0.17
GABRB3-206ENST00000554556 CLEC5AQ9NY25 188 aa16.1■□□□□ 0.17
GABRB3-206ENST00000554556 C14orf166Q9Y224 244 aaKnown RBP16.1■□□□□ 0.17
GABRB3-206ENST00000554556 CDS2O95674 445 aa16.09■□□□□ 0.17
GABRB3-206ENST00000554556 CD74P04233 296 aa16.09■□□□□ 0.17
GABRB3-206ENST00000554556 IGLC1P0CG04 106 aa16.09■□□□□ 0.17
GABRB3-206ENST00000554556 OR10J1P30954 320 aa16.09■□□□□ 0.17
GABRB3-206ENST00000554556 RND2P52198 227 aa16.09■□□□□ 0.17
GABRB3-206ENST00000554556 SNRPD3P62318 126 aaKnown RBP16.09■□□□□ 0.17
GABRB3-206ENST00000554556 AARDQ4LEZ3 155 aa16.09■□□□□ 0.17
GABRB3-206ENST00000554556 ETFRF1Q6IPR1 90 aa16.09■□□□□ 0.17
GABRB3-206ENST00000554556 CSNK1G2-AS1Q8NCQ2 148 aa16.09■□□□□ 0.17
GABRB3-206ENST00000554556 GLMPQ8WWB7 406 aa16.09■□□□□ 0.17
GABRB3-206ENST00000554556 TMEM222Q9H0R3 208 aa16.09■□□□□ 0.17
GABRB3-206ENST00000554556 SEPSECSQ9HD40 501 aaKnown RBP16.09■□□□□ 0.17
GABRB3-206ENST00000554556 TEX13DA0A0J9YY54 714 aaPredicted RBP16.08■□□□□ 0.16
GABRB3-206ENST00000554556 ZNF182P17025 639 aaPredicted RBP16.08■□□□□ 0.16
GABRB3-206ENST00000554556 DHODHQ02127 395 aa16.08■□□□□ 0.16
GABRB3-206ENST00000554556 STEAP1BQ6NZ63 245 aa16.08■□□□□ 0.16
GABRB3-206ENST00000554556 PRSS54Q6PEW0 395 aa16.08■□□□□ 0.16
GABRB3-206ENST00000554556 LINC00336Q6ZUF6 198 aa16.08■□□□□ 0.16
GABRB3-206ENST00000554556 NOXA1Q86UR1 476 aa16.08■□□□□ 0.16
GABRB3-206ENST00000554556 OR4D10Q8NGI6 311 aa16.08■□□□□ 0.16
GABRB3-206ENST00000554556 RBPMSQ93062 196 aaKnown RBP16.08■□□□□ 0.16
GABRB3-206ENST00000554556 ABHD1Q96SE0 405 aa16.08■□□□□ 0.16
GABRB3-206ENST00000554556 CACFD1Q9UGQ2 172 aa16.08■□□□□ 0.16
GABRB3-206ENST00000554556 DNAH10Q8IVF4 4471 aa16.08■□□□□ 0.16
GABRB3-206ENST00000554556 CEBPZOSA8MTT3 80 aa16.07■□□□□ 0.16
GABRB3-206ENST00000554556 GSTZ1O43708 216 aaPredicted RBP16.07■□□□□ 0.16
GABRB3-206ENST00000554556 OR5AC1P0C628 307 aa16.07■□□□□ 0.16
GABRB3-206ENST00000554556 NPY1RP25929 384 aa16.07■□□□□ 0.16
GABRB3-206ENST00000554556 SLC24A4Q8NFF2 622 aa16.07■□□□□ 0.16
GABRB3-206ENST00000554556 GLYATL2Q8WU03 294 aa16.07■□□□□ 0.16
GABRB3-206ENST00000554556 DEFB131BA0A096LNP1 70 aa16.06■□□□□ 0.16
GABRB3-206ENST00000554556 SSBP1Q04837 148 aaKnown RBP16.06■□□□□ 0.16
GABRB3-206ENST00000554556 MEF2DQ14814 521 aa16.06■□□□□ 0.16
GABRB3-206ENST00000554556 NAA60Q9H7X0 242 aa16.06■□□□□ 0.16
GABRB3-206ENST00000554556 CACNG5Q9UF02 275 aa16.06■□□□□ 0.16
GABRB3-206ENST00000554556 IL4P05112 153 aa16.05■□□□□ 0.16
GABRB3-206ENST00000554556 SELENOHQ8IZQ5 122 aaKnown RBP16.05■□□□□ 0.16
GABRB3-206ENST00000554556 GPR146Q96CH1 333 aa16.05■□□□□ 0.16
GABRB3-206ENST00000554556 NRN1Q9NPD7 142 aa16.05■□□□□ 0.16
GABRB3-206ENST00000554556 DISC1C4P0D8 188 aa16.04■□□□□ 0.16
GABRB3-206ENST00000554556 FAM90A26D6RGX4 464 aa16.04■□□□□ 0.16
GABRB3-206ENST00000554556 GABARAPH6UMI1 98 aa16.04■□□□□ 0.16
GABRB3-206ENST00000554556 GABARAPO95166 117 aa16.04■□□□□ 0.16
GABRB3-206ENST00000554556 RD3LP0DJH9 198 aa16.04■□□□□ 0.16
GABRB3-206ENST00000554556 SURF2Q15527 256 aaPredicted RBP16.04■□□□□ 0.16
GABRB3-206ENST00000554556 USF2Q15853 346 aaPredicted RBP16.04■□□□□ 0.16
GABRB3-206ENST00000554556 C12orf74Q32Q52 190 aa16.04■□□□□ 0.16
GABRB3-206ENST00000554556 LHFPL5Q8TAF8 219 aa16.04■□□□□ 0.16
GABRB3-206ENST00000554556 NPIPB3Q92617 1050 aa16.04■□□□□ 0.16
GABRB3-206ENST00000554556 RTBDNQ9BSG5 229 aaPredicted RBP16.04■□□□□ 0.16
GABRB3-206ENST00000554556 XCL2Q9UBD3 114 aa16.04■□□□□ 0.16
GABRB3-206ENST00000554556 CELA1Q9UNI1 258 aa16.04■□□□□ 0.16
GABRB3-206ENST00000554556 VPS13DQ5THJ4 4388 aa16.03■□□□□ 0.16
GABRB3-206ENST00000554556 H3BMM0 161 aa16.03■□□□□ 0.16
GABRB3-206ENST00000554556 BUB3O43684 328 aa16.03■□□□□ 0.16
GABRB3-206ENST00000554556 TOMM40O96008 361 aa16.03■□□□□ 0.16
GABRB3-206ENST00000554556 AMBPP02760 352 aa16.03■□□□□ 0.16
GABRB3-206ENST00000554556 P0DMU3 169 aa16.03■□□□□ 0.16
GABRB3-206ENST00000554556 FAM231AP0DMU4 169 aa16.03■□□□□ 0.16
GABRB3-206ENST00000554556 FAM231CP0DMU5 169 aa16.03■□□□□ 0.16
GABRB3-206ENST00000554556 MRPS10P82664 201 aaKnown RBP16.03■□□□□ 0.16
GABRB3-206ENST00000554556 GPR107Q5VW38 600 aa16.03■□□□□ 0.16
GABRB3-206ENST00000554556 TMEM268Q5VZI3 342 aa16.03■□□□□ 0.16
GABRB3-206ENST00000554556 SIGLEC15Q6ZMC9 328 aa16.03■□□□□ 0.16
GABRB3-206ENST00000554556 NDUFAF3Q9BU61 184 aa16.03■□□□□ 0.16
GABRB3-206ENST00000554556 PFDN2Q9UHV9 154 aa16.03■□□□□ 0.16
GABRB3-206ENST00000554556 POM121L12Q8N7R1 296 aa16.02■□□□□ 0.16
GABRB3-206ENST00000554556 ACY3Q96HD9 319 aa16.02■□□□□ 0.16
GABRB3-206ENST00000554556 NUP62P37198 522 aaPredicted RBP16.01■□□□□ 0.15
GABRB3-206ENST00000554556 CTF1Q16619 201 aa16.01■□□□□ 0.15
GABRB3-206ENST00000554556 ZNF767PQ75MW2 155 aa16.01■□□□□ 0.15
GABRB3-206ENST00000554556 KCNIP3Q9Y2W7 256 aa16.01■□□□□ 0.15
GABRB3-206ENST00000554556 DNAH6Q9C0G6 4158 aa16.01■□□□□ 0.15
GABRB3-206ENST00000554556 CRYM-AS1A6NIL9 109 aa16■□□□□ 0.15
GABRB3-206ENST00000554556 RGS5O15539 181 aa16■□□□□ 0.15
GABRB3-206ENST00000554556 IFNA10P01566 189 aa16■□□□□ 0.15
GABRB3-206ENST00000554556 SULT1A3P0DMM9 295 aa16■□□□□ 0.15
GABRB3-206ENST00000554556 SULT1A4P0DMN0 295 aa16■□□□□ 0.15
GABRB3-206ENST00000554556 NKX2-1P43699 371 aaPredicted RBP16■□□□□ 0.15
GABRB3-206ENST00000554556 FAAP20Q6NZ36 180 aa16■□□□□ 0.15
GABRB3-206ENST00000554556 NEU1Q99519 415 aa16■□□□□ 0.15
GABRB3-206ENST00000554556 NAA50Q9GZZ1 169 aaKnown RBP16■□□□□ 0.15
GABRB3-206ENST00000554556 GPR132Q9UNW8 380 aa16■□□□□ 0.15
GABRB3-206ENST00000554556 TMEM56-RWDD3S4R434 201 aa16■□□□□ 0.15
GABRB3-206ENST00000554556 U3KQ87 197 aa16■□□□□ 0.15
GABRB3-206ENST00000554556 TMEM189A5PLL7 270 aa15.99■□□□□ 0.15
GABRB3-206ENST00000554556 SMIM9A6NGZ8 99 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms