RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 YPEL1O60688 119 aa4.81□□□□□ -1.64
VPS33B-203ENST00000554264 S1PR2O95136 353 aa4.81□□□□□ -1.64
VPS33B-203ENST00000554264 HBZP02008 142 aa4.81□□□□□ -1.64
VPS33B-203ENST00000554264 CD55P08174 381 aa4.81□□□□□ -1.64
VPS33B-203ENST00000554264 RFPL3SP0C7P2 107 aa4.81□□□□□ -1.64
VPS33B-203ENST00000554264 TNFSF4P23510 183 aa4.81□□□□□ -1.64
VPS33B-203ENST00000554264 GCHFRP30047 84 aa4.81□□□□□ -1.64
VPS33B-203ENST00000554264 GCH1P30793 250 aa4.81□□□□□ -1.64
VPS33B-203ENST00000554264 CHRNA7P36544 502 aa4.81□□□□□ -1.64
VPS33B-203ENST00000554264 WNT5AP41221 380 aa4.81□□□□□ -1.64
VPS33B-203ENST00000554264 GPR12P47775 334 aa4.81□□□□□ -1.64
VPS33B-203ENST00000554264 HOXA4Q00056 320 aaPredicted RBP4.81□□□□□ -1.64
VPS33B-203ENST00000554264 POU2AF1Q16633 256 aa4.81□□□□□ -1.64
VPS33B-203ENST00000554264 ZNF718Q3SXZ3 478 aa4.81□□□□□ -1.64
VPS33B-203ENST00000554264 PRAMEF5Q5TYX0 476 aa4.81□□□□□ -1.64
VPS33B-203ENST00000554264 PRAMEF6Q5VXH4 476 aa4.81□□□□□ -1.64
VPS33B-203ENST00000554264 BAGE3Q86Y29 109 aa4.81□□□□□ -1.64
VPS33B-203ENST00000554264 BAGE2Q86Y30 109 aa4.81□□□□□ -1.64
VPS33B-203ENST00000554264 C17orf78Q8N4C9 275 aa4.81□□□□□ -1.64
VPS33B-203ENST00000554264 MBD3L2Q8NHZ7 208 aaPredicted RBP4.81□□□□□ -1.64
VPS33B-203ENST00000554264 WIPF2Q8TF74 440 aaPredicted RBP4.81□□□□□ -1.64
VPS33B-203ENST00000554264 DDB2Q92466 427 aa4.81□□□□□ -1.64
VPS33B-203ENST00000554264 PERPQ96FX8 193 aa4.81□□□□□ -1.64
VPS33B-203ENST00000554264 KCNS1Q96KK3 526 aa4.81□□□□□ -1.64
VPS33B-203ENST00000554264 RBM14Q96PK6 669 aaKnown RBP4.81□□□□□ -1.64
VPS33B-203ENST00000554264 YPEL2Q96QA6 119 aa4.81□□□□□ -1.64
VPS33B-203ENST00000554264 ELOVL1Q9BW60 279 aa4.81□□□□□ -1.64
VPS33B-203ENST00000554264 OPN3Q9H1Y3 402 aaPredicted RBP4.81□□□□□ -1.64
VPS33B-203ENST00000554264 HEYLQ9NQ87 328 aaPredicted RBP4.81□□□□□ -1.64
VPS33B-203ENST00000554264 TECRQ9NZ01 308 aaKnown RBP4.81□□□□□ -1.64
VPS33B-203ENST00000554264 IL36RNQ9UBH0 155 aa4.81□□□□□ -1.64
VPS33B-203ENST00000554264 CLN8Q9UBY8 286 aa4.81□□□□□ -1.64
VPS33B-203ENST00000554264 FOXA2Q9Y261 457 aaPredicted RBP4.81□□□□□ -1.64
VPS33B-203ENST00000554264 ZFP30Q9Y2G7 519 aa4.81□□□□□ -1.64
VPS33B-203ENST00000554264 LSM4Q9Y4Z0 139 aaKnown RBP4.81□□□□□ -1.64
VPS33B-203ENST00000554264 STAB1Q9NY15 2570 aa4.81□□□□□ -1.64
VPS33B-203ENST00000554264 TRAV39A0A0B4J263 110 aa4.8□□□□□ -1.64
VPS33B-203ENST00000554264 A0A1W2PRE2 83 aa4.8□□□□□ -1.64
VPS33B-203ENST00000554264 FCN1O00602 326 aa4.8□□□□□ -1.64
VPS33B-203ENST00000554264 ZNF253O75346 499 aa4.8□□□□□ -1.64
VPS33B-203ENST00000554264 RHBDL1O75783 438 aa4.8□□□□□ -1.64
VPS33B-203ENST00000554264 OR4A8P0C604 315 aa4.8□□□□□ -1.64
VPS33B-203ENST00000554264 ARL14EPLP0DKL9 152 aa4.8□□□□□ -1.64
VPS33B-203ENST00000554264 DUTP33316 252 aaKnown RBP4.8□□□□□ -1.64
VPS33B-203ENST00000554264 CFHR2P36980 270 aa4.8□□□□□ -1.64
VPS33B-203ENST00000554264 VDAC2P45880 294 aaPredicted RBP4.8□□□□□ -1.64
VPS33B-203ENST00000554264 GABRA2P47869 451 aa4.8□□□□□ -1.64
VPS33B-203ENST00000554264 GNG4P50150 75 aa4.8□□□□□ -1.64
VPS33B-203ENST00000554264 CX3CL1P78423 397 aa4.8□□□□□ -1.64
VPS33B-203ENST00000554264 FOXF2Q12947 444 aa4.8□□□□□ -1.64
VPS33B-203ENST00000554264 SPATA46Q5T0L3 261 aa4.8□□□□□ -1.64
VPS33B-203ENST00000554264 TPTE2P1Q5T6R2 138 aa4.8□□□□□ -1.64
VPS33B-203ENST00000554264 ZNF705AQ6ZN79 300 aaPredicted RBP4.8□□□□□ -1.64
VPS33B-203ENST00000554264 ACP7Q6ZNF0 438 aa4.8□□□□□ -1.64
VPS33B-203ENST00000554264 MYPOPQ86VE0 399 aaPredicted RBP4.8□□□□□ -1.64
VPS33B-203ENST00000554264 MMD2Q8IY49 270 aa4.8□□□□□ -1.64
VPS33B-203ENST00000554264 GCSAMQ8N6F7 178 aa4.8□□□□□ -1.64
VPS33B-203ENST00000554264 OR1L1Q8NH94 360 aa4.8□□□□□ -1.64
VPS33B-203ENST00000554264 S1PR3Q99500 378 aa4.8□□□□□ -1.64
VPS33B-203ENST00000554264 GGTLC1Q9BX51 225 aa4.8□□□□□ -1.64
VPS33B-203ENST00000554264 OR2J1Q9GZK6 312 aa4.8□□□□□ -1.64
VPS33B-203ENST00000554264 UBTD1Q9HAC8 227 aa4.8□□□□□ -1.64
VPS33B-203ENST00000554264 PATZ1Q9HBE1 687 aaKnown RBP4.8□□□□□ -1.64
VPS33B-203ENST00000554264 PRNDQ9UKY0 176 aa4.8□□□□□ -1.64
VPS33B-203ENST00000554264 TBL2Q9Y4P3 447 aaKnown RBP4.8□□□□□ -1.64
VPS33B-203ENST00000554264 SOX21Q9Y651 276 aaPredicted RBP4.8□□□□□ -1.64
VPS33B-203ENST00000554264 FBN1P35555 2871 aaKnown RBP4.79□□□□□ -1.64
VPS33B-203ENST00000554264 LINC01548A6NM66 108 aa4.79□□□□□ -1.64
VPS33B-203ENST00000554264 C15orf61A6NNL5 157 aa4.79□□□□□ -1.64
VPS33B-203ENST00000554264 C17orf98A8MV24 154 aa4.79□□□□□ -1.64
VPS33B-203ENST00000554264 PRSS46E5RG02 174 aa4.79□□□□□ -1.64
VPS33B-203ENST00000554264 INS-IGF2F8WCM5 200 aa4.79□□□□□ -1.64
VPS33B-203ENST00000554264 RAMP3O60896 148 aa4.79□□□□□ -1.64
VPS33B-203ENST00000554264 GPX1P07203 203 aa4.79□□□□□ -1.64
VPS33B-203ENST00000554264 SNRPCP09234 159 aaKnown RBP4.79□□□□□ -1.64
VPS33B-203ENST00000554264 ZNF25P17030 456 aaPredicted RBP4.79□□□□□ -1.64
VPS33B-203ENST00000554264 NPPCP23582 126 aa4.79□□□□□ -1.64
VPS33B-203ENST00000554264 NPY1RP25929 384 aa4.79□□□□□ -1.64
VPS33B-203ENST00000554264 ATP5G3P48201 142 aa4.79□□□□□ -1.64
VPS33B-203ENST00000554264 RPS20P60866 119 aaKnown RBP4.79□□□□□ -1.64
VPS33B-203ENST00000554264 HSPE1P61604 102 aaKnown RBP4.79□□□□□ -1.64
VPS33B-203ENST00000554264 RPL31P62899 125 aaKnown RBP4.79□□□□□ -1.64
VPS33B-203ENST00000554264 ZNF816Q0VGE8 651 aaPredicted RBP4.79□□□□□ -1.64
VPS33B-203ENST00000554264 EFNB3Q15768 340 aa4.79□□□□□ -1.64
VPS33B-203ENST00000554264 IZUMO4Q1ZYL8 232 aa4.79□□□□□ -1.64
VPS33B-203ENST00000554264 HLA-DRB5Q30154 266 aa4.79□□□□□ -1.64
VPS33B-203ENST00000554264 FAM231DQ6ZW35 169 aa4.79□□□□□ -1.64
VPS33B-203ENST00000554264 ATP5L2Q7Z4Y8 100 aa4.79□□□□□ -1.64
VPS33B-203ENST00000554264 MDP1Q86V88 176 aa4.79□□□□□ -1.64
VPS33B-203ENST00000554264 Q8N7P7 452 aa4.79□□□□□ -1.64
VPS33B-203ENST00000554264 SLC24A4Q8NFF2 622 aa4.79□□□□□ -1.64
VPS33B-203ENST00000554264 STXBP6Q8NFX7 210 aa4.79□□□□□ -1.64
VPS33B-203ENST00000554264 OR1L6Q8NGR2 347 aa4.79□□□□□ -1.64
VPS33B-203ENST00000554264 OCC1Q8TAD7 63 aa4.79□□□□□ -1.64
VPS33B-203ENST00000554264 GATAD1Q8WUU5 269 aa4.79□□□□□ -1.64
VPS33B-203ENST00000554264 ORAOV1Q8WV07 137 aa4.79□□□□□ -1.64
VPS33B-203ENST00000554264 CACNG8Q8WXS5 425 aa4.79□□□□□ -1.64
VPS33B-203ENST00000554264 BORCS7Q96B45 105 aa4.79□□□□□ -1.64
VPS33B-203ENST00000554264 RITA1Q96K30 269 aa4.79□□□□□ -1.64
VPS33B-203ENST00000554264 ZNF488Q96MN9 340 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms