RNA–Protein interactions for RNA: ENST00000553960.1

PABPN1-203, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-203ENST00000553960 PFDN5Q99471 154 aa8.51□□□□□ -1.05
PABPN1-203ENST00000553960 ACTR3CQ9C0K3 210 aaPredicted RBP8.51□□□□□ -1.05
PABPN1-203ENST00000553960 PFDN2Q9UHV9 154 aa8.51□□□□□ -1.05
PABPN1-203ENST00000553960 NSD1Q96L73 2696 aaPredicted RBP8.51□□□□□ -1.05
PABPN1-203ENST00000553960 CSMD1Q96PZ7 3565 aa8.51□□□□□ -1.05
PABPN1-203ENST00000553960 BAHCC1Q9P281 2608 aa8.5□□□□□ -1.05
PABPN1-203ENST00000553960 RNASE1P07998 156 aaKnown RBP8.5□□□□□ -1.05
PABPN1-203ENST00000553960 OR10J1P30954 320 aa8.5□□□□□ -1.05
PABPN1-203ENST00000553960 PSMB3P49720 205 aa8.5□□□□□ -1.05
PABPN1-203ENST00000553960 RAB2AP61019 212 aa8.5□□□□□ -1.05
PABPN1-203ENST00000553960 RHOBP62745 196 aa8.5□□□□□ -1.05
PABPN1-203ENST00000553960 ZNF726P1Q15940 193 aa8.5□□□□□ -1.05
PABPN1-203ENST00000553960 FFAR4Q5NUL3 377 aa8.5□□□□□ -1.05
PABPN1-203ENST00000553960 TMEM182Q6ZP80 229 aaPredicted RBP8.5□□□□□ -1.05
PABPN1-203ENST00000553960 OR1L4Q8NGR5 311 aa8.5□□□□□ -1.05
PABPN1-203ENST00000553960 OR2T6Q8NHC8 308 aa8.5□□□□□ -1.05
PABPN1-203ENST00000553960 TNFRSF19Q9NS68 423 aa8.5□□□□□ -1.05
PABPN1-203ENST00000553960 C21orf62Q9NYP8 219 aa8.5□□□□□ -1.05
PABPN1-203ENST00000553960 MRPL36Q9P0J6 103 aaKnown RBP8.5□□□□□ -1.05
PABPN1-203ENST00000553960 SOX21Q9Y651 276 aaPredicted RBP8.5□□□□□ -1.05
PABPN1-203ENST00000553960 HIVEP1P15822 2718 aa8.5□□□□□ -1.05
PABPN1-203ENST00000553960 A0A0G2JLM5 398 aa8.49□□□□□ -1.05
PABPN1-203ENST00000553960 HOXA3O43365 443 aaPredicted RBP8.49□□□□□ -1.05
PABPN1-203ENST00000553960 NDUFB8O95169 186 aa8.49□□□□□ -1.05
PABPN1-203ENST00000553960 TOMM40O96008 361 aa8.49□□□□□ -1.05
PABPN1-203ENST00000553960 PRH1P02810 166 aa8.49□□□□□ -1.05
PABPN1-203ENST00000553960 REG1AP05451 166 aa8.49□□□□□ -1.05
PABPN1-203ENST00000553960 ELANEP08246 267 aa8.49□□□□□ -1.05
PABPN1-203ENST00000553960 STAG3L2P0CL84 134 aa8.49□□□□□ -1.05
PABPN1-203ENST00000553960 STAG3L3P0CL85 134 aa8.49□□□□□ -1.05
PABPN1-203ENST00000553960 PSMB8P28062 276 aa8.49□□□□□ -1.05
PABPN1-203ENST00000553960 S100A7P31151 101 aa8.49□□□□□ -1.05
PABPN1-203ENST00000553960 HILS1P60008 231 aa8.49□□□□□ -1.05
PABPN1-203ENST00000553960 BLCAPP62952 87 aa8.49□□□□□ -1.05
PABPN1-203ENST00000553960 FOXE3Q13461 319 aa8.49□□□□□ -1.05
PABPN1-203ENST00000553960 MLANAQ16655 118 aa8.49□□□□□ -1.05
PABPN1-203ENST00000553960 RBMS3Q6XE24 437 aaKnown RBP8.49□□□□□ -1.05
PABPN1-203ENST00000553960 PQLC2Q6ZP29 291 aa8.49□□□□□ -1.05
PABPN1-203ENST00000553960 SIGLECL1Q8N7X8 197 aa8.49□□□□□ -1.05
PABPN1-203ENST00000553960 BPIFCQ8NFQ6 507 aa8.49□□□□□ -1.05
PABPN1-203ENST00000553960 STXBP6Q8NFX7 210 aa8.49□□□□□ -1.05
PABPN1-203ENST00000553960 OR10G9Q8NGN4 311 aa8.49□□□□□ -1.05
PABPN1-203ENST00000553960 OR10G7Q8NGN6 311 aa8.49□□□□□ -1.05
PABPN1-203ENST00000553960 WIPF2Q8TF74 440 aaPredicted RBP8.49□□□□□ -1.05
PABPN1-203ENST00000553960 MISP3Q96FF7 219 aa8.49□□□□□ -1.05
PABPN1-203ENST00000553960 FAM210AQ96ND0 272 aa8.49□□□□□ -1.05
PABPN1-203ENST00000553960 JMJD8Q96S16 334 aa8.49□□□□□ -1.05
PABPN1-203ENST00000553960 FAM103A1Q9BTL3 118 aaKnown RBP8.49□□□□□ -1.05
PABPN1-203ENST00000553960 C16orf95Q9H693 158 aa8.49□□□□□ -1.05
PABPN1-203ENST00000553960 ZNF702PQ9H963 129 aa8.49□□□□□ -1.05
PABPN1-203ENST00000553960 DNAJC4Q9NNZ3 241 aa8.49□□□□□ -1.05
PABPN1-203ENST00000553960 TECRQ9NZ01 308 aaKnown RBP8.49□□□□□ -1.05
PABPN1-203ENST00000553960 MDFIC2A0A1B0GVS7 189 aa8.48□□□□□ -1.05
PABPN1-203ENST00000553960 WI2-2373I1.2A0A1W2PRP0 233 aa8.48□□□□□ -1.05
PABPN1-203ENST00000553960 SMCO3A2RU48 225 aa8.48□□□□□ -1.05
PABPN1-203ENST00000553960 LINC01548A6NM66 108 aa8.48□□□□□ -1.05
PABPN1-203ENST00000553960 KRBOX1C9JBD0 128 aa8.48□□□□□ -1.05
PABPN1-203ENST00000553960 SMAD7O15105 426 aaKnown RBP8.48□□□□□ -1.05
PABPN1-203ENST00000553960 CTSGP08311 255 aa8.48□□□□□ -1.05
PABPN1-203ENST00000553960 SRP14P37108 136 aaKnown RBP8.48□□□□□ -1.05
PABPN1-203ENST00000553960 RHOGP84095 191 aa8.48□□□□□ -1.05
PABPN1-203ENST00000553960 KHDC3LQ587J8 217 aa8.48□□□□□ -1.05
PABPN1-203ENST00000553960 MIC13Q5XKP0 118 aa8.48□□□□□ -1.05
PABPN1-203ENST00000553960 ZNF343Q6P1L6 599 aa8.48□□□□□ -1.05
PABPN1-203ENST00000553960 FAM213BQ8TBF2 198 aa8.48□□□□□ -1.05
PABPN1-203ENST00000553960 RAB24Q969Q5 203 aa8.48□□□□□ -1.05
PABPN1-203ENST00000553960 PBDC1Q9BVG4 233 aa8.48□□□□□ -1.05
PABPN1-203ENST00000553960 YAE1D1Q9NRH1 226 aa8.48□□□□□ -1.05
PABPN1-203ENST00000553960 MRPL27Q9P0M9 148 aaKnown RBP8.48□□□□□ -1.05
PABPN1-203ENST00000553960 FBXL7Q9UJT9 491 aa8.48□□□□□ -1.05
PABPN1-203ENST00000553960 ZFP92A6NM28 416 aa8.47□□□□□ -1.05
PABPN1-203ENST00000553960 G3V318 75 aa8.47□□□□□ -1.05
PABPN1-203ENST00000553960 NDUFA7O95182 113 aa8.47□□□□□ -1.05
PABPN1-203ENST00000553960 LY6G6DO95868 133 aa8.47□□□□□ -1.05
PABPN1-203ENST00000553960 CD99P14209 185 aa8.47□□□□□ -1.05
PABPN1-203ENST00000553960 CDC34P49427 236 aaPredicted RBP8.47□□□□□ -1.05
PABPN1-203ENST00000553960 FHITP49789 147 aa8.47□□□□□ -1.05
PABPN1-203ENST00000553960 RAB9AP51151 201 aa8.47□□□□□ -1.05
PABPN1-203ENST00000553960 TAS2R45P59539 299 aa8.47□□□□□ -1.05
PABPN1-203ENST00000553960 LY6EQ16553 131 aa8.47□□□□□ -1.05
PABPN1-203ENST00000553960 C10orf91Q5T1B1 145 aa8.47□□□□□ -1.05
PABPN1-203ENST00000553960 OR51G1Q8NGK1 321 aa8.47□□□□□ -1.05
PABPN1-203ENST00000553960 ACY3Q96HD9 319 aa8.47□□□□□ -1.05
PABPN1-203ENST00000553960 VSIRQ9H7M9 311 aa8.47□□□□□ -1.05
PABPN1-203ENST00000553960 MANBALQ9NQG1 85 aa8.47□□□□□ -1.05
PABPN1-203ENST00000553960 FUT9Q9Y231 359 aa8.47□□□□□ -1.05
PABPN1-203ENST00000553960 SVEP1Q4LDE5 3571 aa8.47□□□□□ -1.05
PABPN1-203ENST00000553960 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.46□□□□□ -1.06
PABPN1-203ENST00000553960 MAP1LC3B2A6NCE7 125 aa8.46□□□□□ -1.06
PABPN1-203ENST00000553960 CXorf1O96002 111 aa8.46□□□□□ -1.06
PABPN1-203ENST00000553960 HSPB1P04792 205 aaKnown RBP8.46□□□□□ -1.06
PABPN1-203ENST00000553960 RD3LP0DJH9 198 aa8.46□□□□□ -1.06
PABPN1-203ENST00000553960 ZNF616Q08AN1 781 aa8.46□□□□□ -1.06
PABPN1-203ENST00000553960 KIAA0141Q14154 515 aaPredicted RBP8.46□□□□□ -1.06
PABPN1-203ENST00000553960 C15orf32Q32M92 178 aa8.46□□□□□ -1.06
PABPN1-203ENST00000553960 ZNF506Q5JVG8 444 aa8.46□□□□□ -1.06
PABPN1-203ENST00000553960 COMMD7Q86VX2 200 aa8.46□□□□□ -1.06
PABPN1-203ENST00000553960 ARL6IP6Q8N6S5 226 aa8.46□□□□□ -1.06
PABPN1-203ENST00000553960 ZNF491Q8N8L2 437 aa8.46□□□□□ -1.06
PABPN1-203ENST00000553960 OR5T1Q8NG75 326 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms