RNA–Protein interactions for RNA: ENST00000553949.1

SHMT2-209, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-209ENST00000553949 SCGB2A1O75556 95 aa9.38□□□□□ -0.91
SHMT2-209ENST00000553949 IGLC1P0CG04 106 aa9.38□□□□□ -0.91
SHMT2-209ENST00000553949 RPL12P30050 165 aaKnown RBP9.38□□□□□ -0.91
SHMT2-209ENST00000553949 OR10J1P30954 320 aa9.38□□□□□ -0.91
SHMT2-209ENST00000553949 S100A11P31949 105 aa9.38□□□□□ -0.91
SHMT2-209ENST00000553949 SYNJ2BPP57105 145 aa9.38□□□□□ -0.91
SHMT2-209ENST00000553949 HBG1P69891 147 aa9.38□□□□□ -0.91
SHMT2-209ENST00000553949 HBG2P69892 147 aa9.38□□□□□ -0.91
SHMT2-209ENST00000553949 NHLH2Q02577 135 aa9.38□□□□□ -0.91
SHMT2-209ENST00000553949 AKR1C1Q04828 323 aa9.38□□□□□ -0.91
SHMT2-209ENST00000553949 RELQ04864 619 aaPredicted RBP9.38□□□□□ -0.91
SHMT2-209ENST00000553949 SLC38A11Q08AI6 406 aa9.38□□□□□ -0.91
SHMT2-209ENST00000553949 GPHB5Q86YW7 130 aa9.38□□□□□ -0.91
SHMT2-209ENST00000553949 OR1S2Q8NGQ3 325 aa9.38□□□□□ -0.91
SHMT2-209ENST00000553949 DLX4Q92988 240 aaPredicted RBP9.38□□□□□ -0.91
SHMT2-209ENST00000553949 ST6GAL2Q96JF0 529 aa9.38□□□□□ -0.91
SHMT2-209ENST00000553949 FXYD6-FXYD2A0A087WZ82 144 aa9.37□□□□□ -0.91
SHMT2-209ENST00000553949 FNDC10F2Z333 226 aa9.37□□□□□ -0.91
SHMT2-209ENST00000553949 IGKV1-17P01599 117 aa9.37□□□□□ -0.91
SHMT2-209ENST00000553949 TIGITQ495A1 244 aa9.37□□□□□ -0.91
SHMT2-209ENST00000553949 PRR31Q5SQ13 230 aa9.37□□□□□ -0.91
SHMT2-209ENST00000553949 C1QL4Q86Z23 238 aa9.37□□□□□ -0.91
SHMT2-209ENST00000553949 LILRB2Q8N423 598 aa9.37□□□□□ -0.91
SHMT2-209ENST00000553949 THAP8Q8NA92 274 aa9.37□□□□□ -0.91
SHMT2-209ENST00000553949 OR5C1Q8NGR4 320 aa9.37□□□□□ -0.91
SHMT2-209ENST00000553949 ZNF414Q96IQ9 312 aa9.37□□□□□ -0.91
SHMT2-209ENST00000553949 HSPB11Q9Y547 144 aa9.37□□□□□ -0.91
SHMT2-209ENST00000553949 IGKV1D-37A0A075B6S9 117 aa9.36□□□□□ -0.91
SHMT2-209ENST00000553949 IGKV1OR2-108A0A075B7D4 117 aa9.36□□□□□ -0.91
SHMT2-209ENST00000553949 ZNF320A2RRD8 509 aa9.36□□□□□ -0.91
SHMT2-209ENST00000553949 ZFP92A6NM28 416 aa9.36□□□□□ -0.91
SHMT2-209ENST00000553949 NDUFA4O00483 81 aa9.36□□□□□ -0.91
SHMT2-209ENST00000553949 OVOL1O14753 267 aa9.36□□□□□ -0.91
SHMT2-209ENST00000553949 NUP62P37198 522 aaPredicted RBP9.36□□□□□ -0.91
SHMT2-209ENST00000553949 ATP6V1FQ16864 119 aa9.36□□□□□ -0.91
SHMT2-209ENST00000553949 VWC2Q2TAL6 325 aa9.36□□□□□ -0.91
SHMT2-209ENST00000553949 FAM106AQ4KMX7 169 aa9.36□□□□□ -0.91
SHMT2-209ENST00000553949 UNQ9165/PRO28630Q6UXU0 137 aa9.36□□□□□ -0.91
SHMT2-209ENST00000553949 REC114Q7Z4M0 266 aa9.36□□□□□ -0.91
SHMT2-209ENST00000553949 TMEM144Q7Z5S9 345 aa9.36□□□□□ -0.91
SHMT2-209ENST00000553949 ZNF546Q86UE3 836 aa9.36□□□□□ -0.91
SHMT2-209ENST00000553949 AKAP14Q86UN6 197 aa9.36□□□□□ -0.91
SHMT2-209ENST00000553949 TCTE3Q8IZS6 198 aa9.36□□□□□ -0.91
SHMT2-209ENST00000553949 WFDC9Q8NEX5 89 aa9.36□□□□□ -0.91
SHMT2-209ENST00000553949 AQP10Q96PS8 301 aa9.36□□□□□ -0.91
SHMT2-209ENST00000553949 TMEM147Q9BVK8 224 aa9.36□□□□□ -0.91
SHMT2-209ENST00000553949 NPVFQ9HCQ7 196 aa9.36□□□□□ -0.91
SHMT2-209ENST00000553949 UQCC1Q9NVA1 299 aa9.36□□□□□ -0.91
SHMT2-209ENST00000553949 LGALS9O00182 355 aa9.35□□□□□ -0.91
SHMT2-209ENST00000553949 YIF1AO95070 293 aa9.35□□□□□ -0.91
SHMT2-209ENST00000553949 CD33P20138 364 aa9.35□□□□□ -0.91
SHMT2-209ENST00000553949 YPEL3P61236 119 aaPredicted RBP9.35□□□□□ -0.91
SHMT2-209ENST00000553949 ZNF90Q03938 601 aa9.35□□□□□ -0.91
SHMT2-209ENST00000553949 CLINT1Q14677 625 aa9.35□□□□□ -0.91
SHMT2-209ENST00000553949 TREML4Q6UXN2 200 aa9.35□□□□□ -0.91
SHMT2-209ENST00000553949 ZNF600Q6ZNG1 722 aa9.35□□□□□ -0.91
SHMT2-209ENST00000553949 INO80EQ8NBZ0 244 aaPredicted RBP9.35□□□□□ -0.91
SHMT2-209ENST00000553949 OR9G4Q8NGQ1 327 aa9.35□□□□□ -0.91
SHMT2-209ENST00000553949 TMEM190Q8WZ59 177 aa9.35□□□□□ -0.91
SHMT2-209ENST00000553949 RCC1LQ96I51 464 aaKnown RBP9.35□□□□□ -0.91
SHMT2-209ENST00000553949 TRGV9Q99603 122 aa9.35□□□□□ -0.91
SHMT2-209ENST00000553949 TNFSF18Q9UNG2 199 aa9.35□□□□□ -0.91
SHMT2-209ENST00000553949 LSM4Q9Y4Z0 139 aaKnown RBP9.35□□□□□ -0.91
SHMT2-209ENST00000553949 CMYA5Q8N3K9 4069 aa9.35□□□□□ -0.91
SHMT2-209ENST00000553949 WNK1Q9H4A3 2382 aa9.34□□□□□ -0.91
SHMT2-209ENST00000553949 UBE2L5PA0A1B0GUS4 154 aa9.34□□□□□ -0.91
SHMT2-209ENST00000553949 RNF222A6NCQ9 220 aa9.34□□□□□ -0.91
SHMT2-209ENST00000553949 ARPC5O15511 151 aa9.34□□□□□ -0.91
SHMT2-209ENST00000553949 TOMM40O96008 361 aa9.34□□□□□ -0.91
SHMT2-209ENST00000553949 FABP1P07148 127 aa9.34□□□□□ -0.91
SHMT2-209ENST00000553949 RD3LP0DJH9 198 aa9.34□□□□□ -0.91
SHMT2-209ENST00000553949 TEPPQ6URK8 271 aa9.34□□□□□ -0.91
SHMT2-209ENST00000553949 TOMM20LQ6UXN7 152 aa9.34□□□□□ -0.91
SHMT2-209ENST00000553949 OR11H4Q8NGC9 324 aa9.34□□□□□ -0.91
SHMT2-209ENST00000553949 Q8WTZ3 238 aa9.34□□□□□ -0.91
SHMT2-209ENST00000553949 C20orf24Q9BUV8 137 aa9.34□□□□□ -0.91
SHMT2-209ENST00000553949 SMIM3Q9BZL3 60 aa9.34□□□□□ -0.91
SHMT2-209ENST00000553949 PEMTQ9UBM1 199 aa9.34□□□□□ -0.91
SHMT2-209ENST00000553949 PUS1Q9Y606 427 aaKnown RBP eCLIP9.34□□□□□ -0.91
SHMT2-209ENST00000553949 VWFP04275 2813 aa9.34□□□□□ -0.91
SHMT2-209ENST00000553949 IGHV3OR16-8A0A075B7F1 116 aa9.33□□□□□ -0.92
SHMT2-209ENST00000553949 A8MWP6 167 aa9.33□□□□□ -0.92
SHMT2-209ENST00000553949 DFFBO76075 338 aa9.33□□□□□ -0.92
SHMT2-209ENST00000553949 PSG1P11464 419 aa9.33□□□□□ -0.92
SHMT2-209ENST00000553949 OR2F1Q13607 317 aa9.33□□□□□ -0.92
SHMT2-209ENST00000553949 TM4SF20Q53R12 229 aa9.33□□□□□ -0.92
SHMT2-209ENST00000553949 IL34Q6ZMJ4 242 aa9.33□□□□□ -0.92
SHMT2-209ENST00000553949 ATP5SQ99766 215 aa9.33□□□□□ -0.92
SHMT2-209ENST00000553949 ZFAND3Q9H8U3 227 aa9.33□□□□□ -0.92
SHMT2-209ENST00000553949 WDR83OSQ9Y284 106 aa9.33□□□□□ -0.92
SHMT2-209ENST00000553949 UFC1Q9Y3C8 167 aa9.33□□□□□ -0.92
SHMT2-209ENST00000553949 TMEM213A2RRL7 107 aa9.32□□□□□ -0.92
SHMT2-209ENST00000553949 HMSDA8MTL9 139 aa9.32□□□□□ -0.92
SHMT2-209ENST00000553949 SEC14L6B5MCN3 397 aa9.32□□□□□ -0.92
SHMT2-209ENST00000553949 K7EMT4 169 aa9.32□□□□□ -0.92
SHMT2-209ENST00000553949 ZNF207O43670 478 aaKnown RBP9.32□□□□□ -0.92
SHMT2-209ENST00000553949 FGF7P21781 194 aa9.32□□□□□ -0.92
SHMT2-209ENST00000553949 AP2S1P53680 142 aaPredicted RBP9.32□□□□□ -0.92
SHMT2-209ENST00000553949 ELLP55199 621 aaPredicted RBP9.32□□□□□ -0.92
SHMT2-209ENST00000553949 CD300CQ08708 224 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms