RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 SEC14L6B5MCN3 397 aa12.58□□□□□ -0.4
ACTN1-209ENST00000553659 SCO1O75880 301 aa12.58□□□□□ -0.4
ACTN1-209ENST00000553659 RNASE2P10153 161 aaKnown RBP12.58□□□□□ -0.4
ACTN1-209ENST00000553659 ACSM6Q6P461 480 aa12.58□□□□□ -0.4
ACTN1-209ENST00000553659 TMEM170AQ8WVE7 144 aa12.58□□□□□ -0.4
ACTN1-209ENST00000553659 ZNF430Q9H8G1 570 aaPredicted RBP12.58□□□□□ -0.4
ACTN1-209ENST00000553659 MANBALQ9NQG1 85 aa12.58□□□□□ -0.4
ACTN1-209ENST00000553659 LSM4Q9Y4Z0 139 aaKnown RBP12.58□□□□□ -0.4
ACTN1-209ENST00000553659 K7EIL1 84 aa12.57□□□□□ -0.4
ACTN1-209ENST00000553659 SLC25A17O43808 307 aa12.57□□□□□ -0.4
ACTN1-209ENST00000553659 CRYGBP07316 175 aa12.57□□□□□ -0.4
ACTN1-209ENST00000553659 BCL2P10415 239 aa12.57□□□□□ -0.4
ACTN1-209ENST00000553659 PF4V1P10720 104 aa12.57□□□□□ -0.4
ACTN1-209ENST00000553659 RPL29P47914 159 aaKnown RBP12.57□□□□□ -0.4
ACTN1-209ENST00000553659 PSG5Q15238 335 aa12.57□□□□□ -0.4
ACTN1-209ENST00000553659 PRSS8Q16651 343 aa12.57□□□□□ -0.4
ACTN1-209ENST00000553659 SOHLH1Q5JUK2 328 aa12.57□□□□□ -0.4
ACTN1-209ENST00000553659 ETFRF1Q6IPR1 90 aa12.57□□□□□ -0.4
ACTN1-209ENST00000553659 LCN15Q6UWW0 184 aa12.57□□□□□ -0.4
ACTN1-209ENST00000553659 TMEM144Q7Z5S9 345 aa12.57□□□□□ -0.4
ACTN1-209ENST00000553659 RPP25LQ8N5L8 163 aaKnown RBP12.57□□□□□ -0.4
ACTN1-209ENST00000553659 ZNF114Q8NC26 417 aa12.57□□□□□ -0.4
ACTN1-209ENST00000553659 VSIRQ9H7M9 311 aa12.57□□□□□ -0.4
ACTN1-209ENST00000553659 A0A1W2PPI3 338 aa12.56□□□□□ -0.4
ACTN1-209ENST00000553659 A0A1W2PPV4 95 aa12.56□□□□□ -0.4
ACTN1-209ENST00000553659 CORTO00230 105 aa12.56□□□□□ -0.4
ACTN1-209ENST00000553659 RPL27AP46776 148 aaKnown RBP12.56□□□□□ -0.4
ACTN1-209ENST00000553659 CDC34P49427 236 aaPredicted RBP12.56□□□□□ -0.4
ACTN1-209ENST00000553659 PSMB3P49720 205 aa12.56□□□□□ -0.4
ACTN1-209ENST00000553659 CCL20P78556 96 aa12.56□□□□□ -0.4
ACTN1-209ENST00000553659 CD69Q07108 199 aa12.56□□□□□ -0.4
ACTN1-209ENST00000553659 BTN1A1Q13410 526 aa12.56□□□□□ -0.4
ACTN1-209ENST00000553659 ZNF726P1Q15940 193 aa12.56□□□□□ -0.4
ACTN1-209ENST00000553659 GUCA2BQ16661 112 aa12.56□□□□□ -0.4
ACTN1-209ENST00000553659 TCTEX1D4Q5JR98 221 aa12.56□□□□□ -0.4
ACTN1-209ENST00000553659 C16orf82Q7Z2V1 217 aa12.56□□□□□ -0.4
ACTN1-209ENST00000553659 SLC35E1Q96K37 410 aa12.56□□□□□ -0.4
ACTN1-209ENST00000553659 GGTLC1Q9BX51 225 aa12.56□□□□□ -0.4
ACTN1-209ENST00000553659 GNG13Q9P2W3 67 aa12.56□□□□□ -0.4
ACTN1-209ENST00000553659 VAX2Q9UIW0 290 aa12.56□□□□□ -0.4
ACTN1-209ENST00000553659 PXMP4Q9Y6I8 212 aa12.56□□□□□ -0.4
ACTN1-209ENST00000553659 A0A1B0GV50 99 aa12.55□□□□□ -0.4
ACTN1-209ENST00000553659 TCRBV4S1A1TA0A5B7 111 aa12.55□□□□□ -0.4
ACTN1-209ENST00000553659 C9JQL5 133 aa12.55□□□□□ -0.4
ACTN1-209ENST00000553659 MT-CO2P00403 227 aa12.55□□□□□ -0.4
ACTN1-209ENST00000553659 PF4P02776 101 aa12.55□□□□□ -0.4
ACTN1-209ENST00000553659 SRP19P09132 144 aaKnown RBP12.55□□□□□ -0.4
ACTN1-209ENST00000553659 ICAM4Q14773 271 aa12.55□□□□□ -0.4
ACTN1-209ENST00000553659 FAM122CQ6P4D5 195 aa12.55□□□□□ -0.4
ACTN1-209ENST00000553659 CLRN3Q8NCR9 226 aa12.55□□□□□ -0.4
ACTN1-209ENST00000553659 MGST2Q99735 147 aa12.55□□□□□ -0.4
ACTN1-209ENST00000553659 TXNDC17Q9BRA2 123 aa12.55□□□□□ -0.4
ACTN1-209ENST00000553659 TSSC4Q9Y5U2 329 aaPredicted RBP12.55□□□□□ -0.4
ACTN1-209ENST00000553659 MYOD1P15172 320 aa12.54□□□□□ -0.4
ACTN1-209ENST00000553659 B2MP61769 119 aa12.54□□□□□ -0.4
ACTN1-209ENST00000553659 HNF4GQ14541 408 aa12.54□□□□□ -0.4
ACTN1-209ENST00000553659 RHEBQ15382 184 aa12.54□□□□□ -0.4
ACTN1-209ENST00000553659 HAGHQ16775 308 aa12.54□□□□□ -0.4
ACTN1-209ENST00000553659 DEFB121Q5J5C9 76 aa12.54□□□□□ -0.4
ACTN1-209ENST00000553659 PPP1R27Q86WC6 154 aa12.54□□□□□ -0.4
ACTN1-209ENST00000553659 METTL1Q9UBP6 276 aaKnown RBP12.54□□□□□ -0.4
ACTN1-209ENST00000553659 IGHV3-72A0A0B4J1Y9 119 aa12.53□□□□□ -0.4
ACTN1-209ENST00000553659 MOSP00540 346 aa12.53□□□□□ -0.4
ACTN1-209ENST00000553659 IGKV1D-33P01593 117 aa12.53□□□□□ -0.4
ACTN1-209ENST00000553659 IGKV1-33P01594 117 aa12.53□□□□□ -0.4
ACTN1-209ENST00000553659 SNRNP70P08621 437 aaKnown RBP12.53□□□□□ -0.4
ACTN1-209ENST00000553659 BRS3P32247 399 aa12.53□□□□□ -0.4
ACTN1-209ENST00000553659 RHOBP62745 196 aa12.53□□□□□ -0.4
ACTN1-209ENST00000553659 PVRIGQ6DKI7 326 aa12.53□□□□□ -0.4
ACTN1-209ENST00000553659 ATRAIDQ6UW56 229 aa12.53□□□□□ -0.4
ACTN1-209ENST00000553659 SLC16A13Q7RTY0 426 aa12.53□□□□□ -0.4
ACTN1-209ENST00000553659 NPBQ8NG41 125 aa12.53□□□□□ -0.4
ACTN1-209ENST00000553659 OR1L6Q8NGR2 347 aa12.53□□□□□ -0.4
ACTN1-209ENST00000553659 OR2T10Q8NGZ9 312 aa12.53□□□□□ -0.4
ACTN1-209ENST00000553659 RXFP4Q8TDU9 374 aa12.53□□□□□ -0.4
ACTN1-209ENST00000553659 RAB24Q969Q5 203 aa12.53□□□□□ -0.4
ACTN1-209ENST00000553659 RNF2Q99496 336 aa12.53□□□□□ -0.4
ACTN1-209ENST00000553659 RARRES2Q99969 163 aa12.53□□□□□ -0.4
ACTN1-209ENST00000553659 SLC25A22Q9H936 323 aa12.53□□□□□ -0.4
ACTN1-209ENST00000553659 DNAH3Q8TD57 4116 aa12.52□□□□□ -0.4
ACTN1-209ENST00000553659 WI2-2373I1.2A0A1W2PRP0 233 aa12.52□□□□□ -0.41
ACTN1-209ENST00000553659 ZFP92A6NM28 416 aa12.52□□□□□ -0.41
ACTN1-209ENST00000553659 DNASE2O00115 360 aaPredicted RBP12.52□□□□□ -0.41
ACTN1-209ENST00000553659 OR13C7P0DN81 318 aa12.52□□□□□ -0.41
ACTN1-209ENST00000553659 CD24P25063 80 aa12.52□□□□□ -0.41
ACTN1-209ENST00000553659 KRTAP10-11P60412 298 aa12.52□□□□□ -0.41
ACTN1-209ENST00000553659 PLGLAQ15195 96 aa12.52□□□□□ -0.41
ACTN1-209ENST00000553659 TNXAQ16473 311 aa12.52□□□□□ -0.41
ACTN1-209ENST00000553659 SLC35E3Q7Z769 313 aa12.52□□□□□ -0.41
ACTN1-209ENST00000553659 OR4X2Q8NGF9 303 aa12.52□□□□□ -0.41
ACTN1-209ENST00000553659 TMEM250H0YL14 139 aa12.51□□□□□ -0.41
ACTN1-209ENST00000553659 NBR2O15453 112 aa12.51□□□□□ -0.41
ACTN1-209ENST00000553659 NDUFA3O95167 84 aa12.51□□□□□ -0.41
ACTN1-209ENST00000553659 CXorf1O96002 111 aa12.51□□□□□ -0.41
ACTN1-209ENST00000553659 PRR20EP86478 221 aa12.51□□□□□ -0.41
ACTN1-209ENST00000553659 PRR20CP86479 221 aa12.51□□□□□ -0.41
ACTN1-209ENST00000553659 PRR20DP86480 221 aa12.51□□□□□ -0.41
ACTN1-209ENST00000553659 PRR20BP86481 221 aa12.51□□□□□ -0.41
ACTN1-209ENST00000553659 PRR20AP86496 221 aa12.51□□□□□ -0.41
ACTN1-209ENST00000553659 WT1-ASQ06250 92 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms