RNA–Protein interactions for RNA: ENST00000553617.5

TDP1-207, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-207ENST00000553617 RRN3P1Q2M238 152 aa2.51□□□□□ -2.01
TDP1-207ENST00000553617 LINC00299Q6ZSB3 139 aa2.51□□□□□ -2.01
TDP1-207ENST00000553617 LINC00305Q7Z4B0 112 aa2.51□□□□□ -2.01
TDP1-207ENST00000553617 MARCH3Q86UD3 253 aa2.51□□□□□ -2.01
TDP1-207ENST00000553617 MDP1Q86V88 176 aa2.51□□□□□ -2.01
TDP1-207ENST00000553617 MSRB3Q8IXL7 192 aa2.51□□□□□ -2.01
TDP1-207ENST00000553617 SAXO1Q8IYX7 474 aa2.51□□□□□ -2.01
TDP1-207ENST00000553617 RAB2BQ8WUD1 216 aa2.51□□□□□ -2.01
TDP1-207ENST00000553617 TOMM6Q96B49 74 aa2.51□□□□□ -2.01
TDP1-207ENST00000553617 CIB3Q96Q77 187 aaPredicted RBP2.51□□□□□ -2.01
TDP1-207ENST00000553617 TIMM17AQ99595 171 aa2.51□□□□□ -2.01
TDP1-207ENST00000553617 SNRNP25Q9BV90 132 aaKnown RBP2.51□□□□□ -2.01
TDP1-207ENST00000553617 MRPL32Q9BYC8 188 aaKnown RBP2.51□□□□□ -2.01
TDP1-207ENST00000553617 DUSP21Q9H596 190 aa2.51□□□□□ -2.01
TDP1-207ENST00000553617 SAR1AQ9NR31 198 aa2.51□□□□□ -2.01
TDP1-207ENST00000553617 RPRMQ9NS64 109 aa2.51□□□□□ -2.01
TDP1-207ENST00000553617 ZNF586Q9NXT0 402 aa2.51□□□□□ -2.01
TDP1-207ENST00000553617 MPC1Q9Y5U8 109 aa2.51□□□□□ -2.01
TDP1-207ENST00000553617 BAZ1AQ9NRL2 1556 aaPredicted RBP2.51□□□□□ -2.01
TDP1-207ENST00000553617 CABIN1Q9Y6J0 2220 aa2.5□□□□□ -2.01
TDP1-207ENST00000553617 SYNJ1O43426 1573 aa2.5□□□□□ -2.01
TDP1-207ENST00000553617 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.5□□□□□ -2.01
TDP1-207ENST00000553617 TRAV27A0A087WT01 109 aa2.5□□□□□ -2.01
TDP1-207ENST00000553617 TRBV7-6A0A0J9YX20 115 aa2.5□□□□□ -2.01
TDP1-207ENST00000553617 A0A1W2PRS3 328 aa2.5□□□□□ -2.01
TDP1-207ENST00000553617 IRGMA1A4Y4 181 aa2.5□□□□□ -2.01
TDP1-207ENST00000553617 ODAMA1E959 279 aa2.5□□□□□ -2.01
TDP1-207ENST00000553617 NDUFC2-KCTD14E9PQ53 114 aa2.5□□□□□ -2.01
TDP1-207ENST00000553617 SOCS1O15524 211 aa2.5□□□□□ -2.01
TDP1-207ENST00000553617 OR2T1O43869 369 aa2.5□□□□□ -2.01
TDP1-207ENST00000553617 KLF7O75840 302 aaPredicted RBP2.5□□□□□ -2.01
TDP1-207ENST00000553617 CST7O76096 145 aa2.5□□□□□ -2.01
TDP1-207ENST00000553617 IGLV3-27P01718 113 aa2.5□□□□□ -2.01
TDP1-207ENST00000553617 LINC00869P0C866 280 aa2.5□□□□□ -2.01
TDP1-207ENST00000553617 ZNF705DP0CH99 300 aaPredicted RBP2.5□□□□□ -2.01
TDP1-207ENST00000553617 INAFM2P0DMQ5 153 aa2.5□□□□□ -2.01
TDP1-207ENST00000553617 GZMBP10144 247 aa2.5□□□□□ -2.01
TDP1-207ENST00000553617 FABP2P12104 132 aa2.5□□□□□ -2.01
TDP1-207ENST00000553617 ZNF14P17017 642 aaPredicted RBP2.5□□□□□ -2.01
TDP1-207ENST00000553617 MDKP21741 143 aaPredicted RBP2.5□□□□□ -2.01
TDP1-207ENST00000553617 RPL22P35268 128 aaKnown RBP2.5□□□□□ -2.01
TDP1-207ENST00000553617 DAPP51397 102 aa2.5□□□□□ -2.01
TDP1-207ENST00000553617 CRADDP78560 199 aa2.5□□□□□ -2.01
TDP1-207ENST00000553617 ZNF846Q147U1 533 aa2.5□□□□□ -2.01
TDP1-207ENST00000553617 MRPL2Q5T653 305 aaKnown RBP2.5□□□□□ -2.01
TDP1-207ENST00000553617 SLC25A34Q6PIV7 304 aa2.5□□□□□ -2.01
TDP1-207ENST00000553617 ZNF705AQ6ZN79 300 aaPredicted RBP2.5□□□□□ -2.01
TDP1-207ENST00000553617 NTM-AS1Q6ZSK4 140 aa2.5□□□□□ -2.01
TDP1-207ENST00000553617 ZNF720Q7Z2F6 126 aa2.5□□□□□ -2.01
TDP1-207ENST00000553617 TRAPPC6BQ86SZ2 158 aa2.5□□□□□ -2.01
TDP1-207ENST00000553617 RPS19BP1Q86WX3 136 aaKnown RBP2.5□□□□□ -2.01
TDP1-207ENST00000553617 LINC00471Q8N535 108 aa2.5□□□□□ -2.01
TDP1-207ENST00000553617 OR5C1Q8NGR4 320 aa2.5□□□□□ -2.01
TDP1-207ENST00000553617 OR1J4Q8NGS1 313 aa2.5□□□□□ -2.01
TDP1-207ENST00000553617 SLC25A46Q96AG3 418 aa2.5□□□□□ -2.01
TDP1-207ENST00000553617 CAMK2N2Q96S95 79 aa2.5□□□□□ -2.01
TDP1-207ENST00000553617 TBL1YQ9BQ87 522 aa2.5□□□□□ -2.01
TDP1-207ENST00000553617 DPY30Q9C005 99 aa2.5□□□□□ -2.01
TDP1-207ENST00000553617 BANF2Q9H503 90 aa2.5□□□□□ -2.01
TDP1-207ENST00000553617 FKBP11Q9NYL4 201 aa2.5□□□□□ -2.01
TDP1-207ENST00000553617 RPL26L1Q9UNX3 145 aaKnown RBP2.5□□□□□ -2.01
TDP1-207ENST00000553617 ZNF443Q9Y2A4 671 aaPredicted RBP2.5□□□□□ -2.01
TDP1-207ENST00000553617 RNF11Q9Y3C5 154 aa2.5□□□□□ -2.01
TDP1-207ENST00000553617 GPATCH8Q9UKJ3 1502 aaKnown RBP2.5□□□□□ -2.01
TDP1-207ENST00000553617 ZNF638Q14966 1978 aaKnown RBP2.5□□□□□ -2.01
TDP1-207ENST00000553617 DOCK4Q8N1I0 1966 aa2.5□□□□□ -2.01
TDP1-207ENST00000553617 ANKRD26Q9UPS8 1709 aa2.5□□□□□ -2.01
TDP1-207ENST00000553617 A2ML1A8K2U0 1454 aa2.5□□□□□ -2.01
TDP1-207ENST00000553617 UACAQ9BZF9 1416 aa2.5□□□□□ -2.01
TDP1-207ENST00000553617 TRAV19A0A0A6YYK7 116 aa2.49□□□□□ -2.01
TDP1-207ENST00000553617 IGHV1OR15-9A0A0B4J2B8 117 aa2.49□□□□□ -2.01
TDP1-207ENST00000553617 IGHV1-58A0A0C4DH39 117 aa2.49□□□□□ -2.01
TDP1-207ENST00000553617 A0A1B0GVY2 172 aa2.49□□□□□ -2.01
TDP1-207ENST00000553617 A8MU10 97 aa2.49□□□□□ -2.01
TDP1-207ENST00000553617 ZNF727A8MUV8 499 aa2.49□□□□□ -2.01
TDP1-207ENST00000553617 A8MWV9 139 aa2.49□□□□□ -2.01
TDP1-207ENST00000553617 IGLL5B9A064 214 aa2.49□□□□□ -2.01
TDP1-207ENST00000553617 C9JQL5 133 aa2.49□□□□□ -2.01
TDP1-207ENST00000553617 H3BMG7 143 aa2.49□□□□□ -2.01
TDP1-207ENST00000553617 RPL36A-HNRNPH2H7BZ11 118 aa2.49□□□□□ -2.01
TDP1-207ENST00000553617 ZNF73O43830 326 aaPredicted RBP2.49□□□□□ -2.01
TDP1-207ENST00000553617 MRPS14O60783 128 aaKnown RBP2.49□□□□□ -2.01
TDP1-207ENST00000553617 SLC25A14O95258 325 aaPredicted RBP2.49□□□□□ -2.01
TDP1-207ENST00000553617 NAPSAO96009 420 aa2.49□□□□□ -2.01
TDP1-207ENST00000553617 OR5AC1P0C628 307 aa2.49□□□□□ -2.01
TDP1-207ENST00000553617 IFITM1P13164 125 aa2.49□□□□□ -2.01
TDP1-207ENST00000553617 ZNF823P16415 610 aa2.49□□□□□ -2.01
TDP1-207ENST00000553617 LGALS3P17931 250 aaKnown RBP2.49□□□□□ -2.01
TDP1-207ENST00000553617 ZNF83P51522 516 aa2.49□□□□□ -2.01
TDP1-207ENST00000553617 EIF5AP63241 154 aaKnown RBP2.49□□□□□ -2.01
TDP1-207ENST00000553617 DCDP81605 110 aaKnown RBP2.49□□□□□ -2.01
TDP1-207ENST00000553617 DIAPH2-AS1Q14236 149 aa2.49□□□□□ -2.01
TDP1-207ENST00000553617 LINC00303Q3SY05 128 aa2.49□□□□□ -2.01
TDP1-207ENST00000553617 C2orf83Q53S99 150 aa2.49□□□□□ -2.01
TDP1-207ENST00000553617 EIF5AL1Q6IS14 154 aaKnown RBP2.49□□□□□ -2.01
TDP1-207ENST00000553617 IZUMO2Q6UXV1 221 aa2.49□□□□□ -2.01
TDP1-207ENST00000553617 LCA10Q71F78 164 aa2.49□□□□□ -2.01
TDP1-207ENST00000553617 SVBPQ8N300 66 aa2.49□□□□□ -2.01
TDP1-207ENST00000553617 RPP25LQ8N5L8 163 aaKnown RBP2.49□□□□□ -2.01
TDP1-207ENST00000553617 OR10AC1Q8NH08 325 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms