RNA–Protein interactions for RNA: ENST00000553544.1

SRP54-203, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-203ENST00000553544 DEFB135Q30KP9 77 aa8.73□□□□□ -1.01
SRP54-203ENST00000553544 PINX1Q96BK5 328 aaKnown RBP8.73□□□□□ -1.01
SRP54-203ENST00000553544 GPR146Q96CH1 333 aa8.73□□□□□ -1.01
SRP54-203ENST00000553544 RNF183Q96D59 192 aa8.73□□□□□ -1.01
SRP54-203ENST00000553544 SMPXQ9UHP9 88 aa8.73□□□□□ -1.01
SRP54-203ENST00000553544 TMED3Q9Y3Q3 217 aa8.73□□□□□ -1.01
SRP54-203ENST00000553544 KIAA1109Q2LD37 5005 aa8.73□□□□□ -1.01
SRP54-203ENST00000553544 KIR2DL5BA0A0G2JN68 375 aa8.72□□□□□ -1.01
SRP54-203ENST00000553544 KIR2DL5BA0A0G2JPC4 375 aa8.72□□□□□ -1.01
SRP54-203ENST00000553544 IGHV7-4-1A0A0J9YVY3 117 aa8.72□□□□□ -1.01
SRP54-203ENST00000553544 ZNF207O43670 478 aaKnown RBP8.72□□□□□ -1.01
SRP54-203ENST00000553544 GNG7O60262 68 aa8.72□□□□□ -1.01
SRP54-203ENST00000553544 SFT2D2O95562 160 aa8.72□□□□□ -1.01
SRP54-203ENST00000553544 TMEM50AO95807 157 aa8.72□□□□□ -1.01
SRP54-203ENST00000553544 IFNA4P05014 189 aa8.72□□□□□ -1.01
SRP54-203ENST00000553544 SLC25A6P12236 298 aa8.72□□□□□ -1.01
SRP54-203ENST00000553544 NPBWR1P48145 328 aa8.72□□□□□ -1.01
SRP54-203ENST00000553544 DEFA1P59665 94 aa8.72□□□□□ -1.01
SRP54-203ENST00000553544 DEFA3P59666 94 aa8.72□□□□□ -1.01
SRP54-203ENST00000553544 SMCO1Q147U7 214 aa8.72□□□□□ -1.01
SRP54-203ENST00000553544 LAMTOR1Q6IAA8 161 aa8.72□□□□□ -1.01
SRP54-203ENST00000553544 KIR2DL5AQ8N109 375 aa8.72□□□□□ -1.01
SRP54-203ENST00000553544 LRTM2Q8N967 370 aa8.72□□□□□ -1.01
SRP54-203ENST00000553544 DUSP18Q8NEJ0 188 aa8.72□□□□□ -1.01
SRP54-203ENST00000553544 KIR2DL5BQ8NHK3 375 aa8.72□□□□□ -1.01
SRP54-203ENST00000553544 SDHCQ99643 169 aaPredicted RBP8.72□□□□□ -1.01
SRP54-203ENST00000553544 FNDC4Q9H6D8 234 aaPredicted RBP8.72□□□□□ -1.01
SRP54-203ENST00000553544 MRPL36Q9P0J6 103 aaKnown RBP8.72□□□□□ -1.01
SRP54-203ENST00000553544 CACNG5Q9UF02 275 aa8.72□□□□□ -1.01
SRP54-203ENST00000553544 A0A1B0GU03 582 aa8.71□□□□□ -1.02
SRP54-203ENST00000553544 LINC00854A0A1B0GVQ3 168 aa8.71□□□□□ -1.02
SRP54-203ENST00000553544 FAM240BA0A1B0GVZ2 78 aa8.71□□□□□ -1.02
SRP54-203ENST00000553544 RPS10-NUDT3A0A1W2PQS6 291 aa8.71□□□□□ -1.02
SRP54-203ENST00000553544 CEBPZOSA8MTT3 80 aa8.71□□□□□ -1.02
SRP54-203ENST00000553544 FAM90A26D6RGX4 464 aa8.71□□□□□ -1.02
SRP54-203ENST00000553544 CHEK1O14757 476 aa8.71□□□□□ -1.02
SRP54-203ENST00000553544 IFNA21P01568 189 aa8.71□□□□□ -1.02
SRP54-203ENST00000553544 HTR2BP41595 481 aa8.71□□□□□ -1.02
SRP54-203ENST00000553544 ATP5IP56385 69 aaPredicted RBP8.71□□□□□ -1.02
SRP54-203ENST00000553544 SUPT4H1P63272 117 aaKnown RBP8.71□□□□□ -1.02
SRP54-203ENST00000553544 MLANAQ16655 118 aa8.71□□□□□ -1.02
SRP54-203ENST00000553544 C4orf46Q504U0 113 aa8.71□□□□□ -1.02
SRP54-203ENST00000553544 FAM90A2PQ658T7 463 aa8.71□□□□□ -1.02
SRP54-203ENST00000553544 TOMM20LQ6UXN7 152 aa8.71□□□□□ -1.02
SRP54-203ENST00000553544 RNF2Q99496 336 aa8.71□□□□□ -1.02
SRP54-203ENST00000553544 RHPN1-AS1Q9BWJ2 59 aa8.71□□□□□ -1.02
SRP54-203ENST00000553544 ZFAND3Q9H8U3 227 aa8.71□□□□□ -1.02
SRP54-203ENST00000553544 TRAV14DV4A0A0A6YYC5 116 aa8.7□□□□□ -1.02
SRP54-203ENST00000553544 CLN5O75503 358 aa8.7□□□□□ -1.02
SRP54-203ENST00000553544 MED6O75586 246 aa8.7□□□□□ -1.02
SRP54-203ENST00000553544 YIF1AO95070 293 aa8.7□□□□□ -1.02
SRP54-203ENST00000553544 MED14OSP0DP75 135 aa8.7□□□□□ -1.02
SRP54-203ENST00000553544 TCTAP57738 103 aa8.7□□□□□ -1.02
SRP54-203ENST00000553544 PRR20EP86478 221 aa8.7□□□□□ -1.02
SRP54-203ENST00000553544 PRR20CP86479 221 aa8.7□□□□□ -1.02
SRP54-203ENST00000553544 PRR20DP86480 221 aa8.7□□□□□ -1.02
SRP54-203ENST00000553544 PRR20BP86481 221 aa8.7□□□□□ -1.02
SRP54-203ENST00000553544 PRR20AP86496 221 aa8.7□□□□□ -1.02
SRP54-203ENST00000553544 PPP1R1AQ13522 171 aa8.7□□□□□ -1.02
SRP54-203ENST00000553544 ODF3L2Q3SX64 289 aa8.7□□□□□ -1.02
SRP54-203ENST00000553544 ZNF600Q6ZNG1 722 aa8.7□□□□□ -1.02
SRP54-203ENST00000553544 TMEM116Q8NCL8 245 aa8.7□□□□□ -1.02
SRP54-203ENST00000553544 OR4X1Q8NH49 305 aa8.7□□□□□ -1.02
SRP54-203ENST00000553544 OR1S1Q8NH92 325 aa8.7□□□□□ -1.02
SRP54-203ENST00000553544 ENKURQ8TC29 256 aa8.7□□□□□ -1.02
SRP54-203ENST00000553544 CIB3Q96Q77 187 aaPredicted RBP8.7□□□□□ -1.02
SRP54-203ENST00000553544 MFFQ9GZY8 342 aa8.7□□□□□ -1.02
SRP54-203ENST00000553544 C20orf85Q9H1P6 137 aa8.7□□□□□ -1.02
SRP54-203ENST00000553544 HEYLQ9NQ87 328 aaPredicted RBP8.7□□□□□ -1.02
SRP54-203ENST00000553544 PRR13Q9NZ81 148 aa8.7□□□□□ -1.02
SRP54-203ENST00000553544 UPK1BO75841 260 aa8.69□□□□□ -1.02
SRP54-203ENST00000553544 OR4E1P0C645 316 aa8.69□□□□□ -1.02
SRP54-203ENST00000553544 RPP30P78346 268 aaKnown RBP8.69□□□□□ -1.02
SRP54-203ENST00000553544 C2orf83Q53S99 150 aa8.69□□□□□ -1.02
SRP54-203ENST00000553544 NMSQ5H8A3 153 aa8.69□□□□□ -1.02
SRP54-203ENST00000553544 ETFRF1Q6IPR1 90 aa8.69□□□□□ -1.02
SRP54-203ENST00000553544 LINC00336Q6ZUF6 198 aa8.69□□□□□ -1.02
SRP54-203ENST00000553544 SLC24A4Q8NFF2 622 aa8.69□□□□□ -1.02
SRP54-203ENST00000553544 C11orf45Q8TAV5 145 aa8.69□□□□□ -1.02
SRP54-203ENST00000553544 C2CD4CQ8TF44 421 aa8.69□□□□□ -1.02
SRP54-203ENST00000553544 TMEM170AQ8WVE7 144 aa8.69□□□□□ -1.02
SRP54-203ENST00000553544 VSIRQ9H7M9 311 aa8.69□□□□□ -1.02
SRP54-203ENST00000553544 PUS1Q9Y606 427 aaKnown RBP eCLIP8.69□□□□□ -1.02
SRP54-203ENST00000553544 U3KQ87 197 aa8.69□□□□□ -1.02
SRP54-203ENST00000553544 IGHV3-49A0A0A0MS15 119 aa8.68□□□□□ -1.02
SRP54-203ENST00000553544 C9orf170A2RU37 121 aa8.68□□□□□ -1.02
SRP54-203ENST00000553544 OR4C46A6NHA9 309 aa8.68□□□□□ -1.02
SRP54-203ENST00000553544 IGKV1-17P01599 117 aa8.68□□□□□ -1.02
SRP54-203ENST00000553544 APOHP02749 345 aaPredicted RBP8.68□□□□□ -1.02
SRP54-203ENST00000553544 TCRBP04435 133 aa8.68□□□□□ -1.02
SRP54-203ENST00000553544 BTCP35070 178 aa8.68□□□□□ -1.02
SRP54-203ENST00000553544 OPRK1P41145 380 aa8.68□□□□□ -1.02
SRP54-203ENST00000553544 DHRS2Q13268 280 aa8.68□□□□□ -1.02
SRP54-203ENST00000553544 ASAH1Q13510 395 aa8.68□□□□□ -1.02
SRP54-203ENST00000553544 LYZL2Q7Z4W2 148 aa8.68□□□□□ -1.02
SRP54-203ENST00000553544 LILRB2Q8N423 598 aa8.68□□□□□ -1.02
SRP54-203ENST00000553544 RNASEH2CQ8TDP1 164 aaKnown RBP8.68□□□□□ -1.02
SRP54-203ENST00000553544 GINS3Q9BRX5 216 aa8.68□□□□□ -1.02
SRP54-203ENST00000553544 HSPB7Q9UBY9 170 aa8.68□□□□□ -1.02
SRP54-203ENST00000553544 UBQLN2Q9UHD9 624 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms